RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 FGF23Q9GZV9 251 aaPredicted RBP4.68□□□□□ -1.66
CLCN3-204ENST00000504131 DENND4CQ5VZ89 1909 aa4.68□□□□□ -1.66
CLCN3-204ENST00000504131 KIAA1549Q9HCM3 1950 aa4.68□□□□□ -1.66
CLCN3-204ENST00000504131 LINC01548A6NM66 108 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 IGLV3-19P01714 112 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 DPM3Q9P2X0 92 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 EXPH5Q8NEV8 1989 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 CCL4L1Q8NHW4 92 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 CYP4F30PQ9H0H9 118 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 KIAA1671Q9BY89 1806 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 RALGAPA2Q2PPJ7 1873 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 LY6HO94772 140 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 IGHV3-30P01768 117 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 IGHV3-30-5P0DP03 117 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 RNASE3P12724 160 aaKnown RBP4.67□□□□□ -1.66
CLCN3-204ENST00000504131 PLA2G2AP14555 144 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 SPINT4Q6UDR6 99 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 Q86TA4 180 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 BPESC1Q9GZL8 116 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 NCR3O14931 201 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 PATE1Q8WXA2 126 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 TRIP12Q14669 1992 aaPredicted RBP4.67□□□□□ -1.66
CLCN3-204ENST00000504131 Q0VFX4 171 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 TMEM263Q8WUH6 116 aaKnown RBP4.67□□□□□ -1.66
CLCN3-204ENST00000504131 DIRC1Q969H9 104 aa4.67□□□□□ -1.66
CLCN3-204ENST00000504131 IGHV3-9P01782 118 aa4.66□□□□□ -1.66
CLCN3-204ENST00000504131 SAA2P0DJI9 122 aaPredicted RBP4.66□□□□□ -1.66
CLCN3-204ENST00000504131 ANK1P16157 1881 aa4.66□□□□□ -1.66
CLCN3-204ENST00000504131 IGHV3-21A0A0B4J1V1 117 aa4.66□□□□□ -1.66
CLCN3-204ENST00000504131 A0A0G2JRQ6 117 aa4.66□□□□□ -1.66
CLCN3-204ENST00000504131 UBE2D1P51668 147 aa4.66□□□□□ -1.66
CLCN3-204ENST00000504131 A0A0J9YY99 117 aa4.66□□□□□ -1.66
CLCN3-204ENST00000504131 LECT2O14960 151 aa4.66□□□□□ -1.66
CLCN3-204ENST00000504131 BCE1O60756 84 aa4.66□□□□□ -1.66
CLCN3-204ENST00000504131 PSMG3-AS1Q96PY0 264 aa4.66□□□□□ -1.66
CLCN3-204ENST00000504131 TRAV22A0A0B4J277 110 aa4.66□□□□□ -1.66
CLCN3-204ENST00000504131 DEFB104AQ8WTQ1 72 aa4.66□□□□□ -1.66
CLCN3-204ENST00000504131 IGHV6-1A0A0B4J1U7 121 aa4.65□□□□□ -1.66
CLCN3-204ENST00000504131 LINC00114Q6XXX2 140 aa4.65□□□□□ -1.66
CLCN3-204ENST00000504131 FP248Q71RG6 208 aaPredicted RBP4.65□□□□□ -1.66
CLCN3-204ENST00000504131 MRPL36Q9P0J6 103 aaKnown RBP4.65□□□□□ -1.66
CLCN3-204ENST00000504131 TMEM14CQ9P0S9 112 aa4.65□□□□□ -1.66
CLCN3-204ENST00000504131 CACNA1CQ13936 2221 aa4.65□□□□□ -1.66
CLCN3-204ENST00000504131 PATE4P0C8F1 98 aa4.65□□□□□ -1.67
CLCN3-204ENST00000504131 LEAP2Q969E1 77 aa4.65□□□□□ -1.67
CLCN3-204ENST00000504131 URB1O60287 2271 aaKnown RBP4.65□□□□□ -1.67
CLCN3-204ENST00000504131 SPAG17Q6Q759 2223 aa4.65□□□□□ -1.67
CLCN3-204ENST00000504131 IGKV1-16P04430 117 aa4.65□□□□□ -1.67
CLCN3-204ENST00000504131 ZDBF2Q9HCK1 2354 aa4.65□□□□□ -1.67
CLCN3-204ENST00000504131 SCN2AQ99250 2005 aa4.65□□□□□ -1.67
CLCN3-204ENST00000504131 MAP1BP46821 2468 aaKnown RBP4.65□□□□□ -1.67
CLCN3-204ENST00000504131 LINC00473A8K010 186 aa4.64□□□□□ -1.67
CLCN3-204ENST00000504131 KRTAP16-1A8MUX0 517 aa4.64□□□□□ -1.67
CLCN3-204ENST00000504131 H7BZZ5 65 aa4.64□□□□□ -1.67
CLCN3-204ENST00000504131 J3QKU1 62 aa4.64□□□□□ -1.67
CLCN3-204ENST00000504131 RPL28P46779 137 aaKnown RBP4.64□□□□□ -1.67
CLCN3-204ENST00000504131 MIAQ16674 131 aa4.64□□□□□ -1.67
CLCN3-204ENST00000504131 COX14Q96I36 57 aa4.64□□□□□ -1.67
CLCN3-204ENST00000504131 LINC00588Q9Y4M8 146 aa4.64□□□□□ -1.67
CLCN3-204ENST00000504131 INAFM1C9JVW0 142 aa4.64□□□□□ -1.67
CLCN3-204ENST00000504131 CCL4P13236 92 aa4.64□□□□□ -1.67
CLCN3-204ENST00000504131 TMEM14BQ9NUH8 114 aa4.64□□□□□ -1.67
CLCN3-204ENST00000504131 TSC2P49815 1807 aa4.63□□□□□ -1.67
CLCN3-204ENST00000504131 SMIM2Q9BVW6 85 aa4.63□□□□□ -1.67
CLCN3-204ENST00000504131 CACNA1DQ01668 2161 aa4.63□□□□□ -1.67
CLCN3-204ENST00000504131 MDC1Q14676 2089 aaKnown RBP4.63□□□□□ -1.67
CLCN3-204ENST00000504131 KIF26AQ9ULI4 1882 aaPredicted RBP4.63□□□□□ -1.67
CLCN3-204ENST00000504131 C16orf47Q6ZP98 133 aaPredicted RBP4.63□□□□□ -1.67
CLCN3-204ENST00000504131 LINC00528Q8N1L1 170 aa4.63□□□□□ -1.67
CLCN3-204ENST00000504131 FSHBP01225 129 aa4.63□□□□□ -1.67
CLCN3-204ENST00000504131 HIGD2BQ4VC39 106 aa4.63□□□□□ -1.67
CLCN3-204ENST00000504131 IGLV9-49A0A0B4J1Y8 123 aa4.63□□□□□ -1.67
CLCN3-204ENST00000504131 C3orf84H3BNL1 204 aa4.63□□□□□ -1.67
CLCN3-204ENST00000504131 TRGV3P03979 118 aa4.63□□□□□ -1.67
CLCN3-204ENST00000504131 SYCNQ0VAF6 134 aa4.63□□□□□ -1.67
CLCN3-204ENST00000504131 RP1L1Q8IWN7 2480 aaPredicted RBP4.63□□□□□ -1.67
CLCN3-204ENST00000504131 IGKV1-9A0A0C4DH69 117 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 A0A0J9YXY3 114 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 C11orf86A6NJI1 115 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 IGHV3-13P01766 116 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 CFPP27918 469 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 SVILO95425 2214 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 K7EQD1 137 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 GNRH2O43555 120 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 PDE6HQ13956 83 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 MED13Q9UHV7 2174 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 COL4A6Q14031 1691 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 TRBV10-1A0A0K0K1A3 114 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 PDE6GP18545 87 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 FHL1Q13642 323 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 C17orf98A8MV24 154 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 IGHV3-48P01763 117 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 IGHV4-31P0DP07 118 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 IGKV3OR2-268A0A0C4DH90 116 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 C19orf84I3L1E1 186 aa4.62□□□□□ -1.67
CLCN3-204ENST00000504131 RNASE6Q93091 150 aaKnown RBP4.62□□□□□ -1.67
CLCN3-204ENST00000504131 IGHV3OR16-9A0A0B4J2B5 98 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 LINC00846Q9NV44 126 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 UBE2D4Q9Y2X8 147 aa4.61□□□□□ -1.67
CLCN3-204ENST00000504131 TICRRQ7Z2Z1 1910 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms