RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 GAGE5Q13069 117 aa12.22□□□□□ -0.45
NFKB1-204ENST00000504044 GAGE13Q4V321 117 aa12.22□□□□□ -0.45
NFKB1-204ENST00000504044 MSRB1Q9NZV6 116 aa12.22□□□□□ -0.45
NFKB1-204ENST00000504044 A0A087WWL8 130 aa12.21□□□□□ -0.45
NFKB1-204ENST00000504044 OR5AL1P0C617 328 aa12.21□□□□□ -0.45
NFKB1-204ENST00000504044 SMIM17P0DL12 118 aa12.21□□□□□ -0.45
NFKB1-204ENST00000504044 ERVFC1-1P60608 527 aa12.21□□□□□ -0.45
NFKB1-204ENST00000504044 LINC01556Q5JQF7 62 aa12.21□□□□□ -0.45
NFKB1-204ENST00000504044 UFSP1Q6NVU6 142 aa12.21□□□□□ -0.45
NFKB1-204ENST00000504044 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.21□□□□□ -0.45
NFKB1-204ENST00000504044 DERL1Q9BUN8 251 aa12.21□□□□□ -0.45
NFKB1-204ENST00000504044 JPT2Q9H910 190 aa12.21□□□□□ -0.45
NFKB1-204ENST00000504044 TRBV10-1A0A0K0K1A3 114 aa12.2□□□□□ -0.46
NFKB1-204ENST00000504044 C16orf90A8MZG2 172 aa12.2□□□□□ -0.46
NFKB1-204ENST00000504044 SNAI2O43623 268 aa12.2□□□□□ -0.46
NFKB1-204ENST00000504044 RPL19P84098 196 aaKnown RBP12.2□□□□□ -0.46
NFKB1-204ENST00000504044 ALKAL2Q6UX46 152 aa12.2□□□□□ -0.46
NFKB1-204ENST00000504044 SAMD10Q9BYL1 202 aa12.2□□□□□ -0.46
NFKB1-204ENST00000504044 FRAS1Q86XX4 4008 aa12.19□□□□□ -0.46
NFKB1-204ENST00000504044 P01737 135 aa12.19□□□□□ -0.46
NFKB1-204ENST00000504044 RPL36AP83881 106 aaKnown RBP12.19□□□□□ -0.46
NFKB1-204ENST00000504044 RPL36ALQ969Q0 106 aaKnown RBP12.19□□□□□ -0.46
NFKB1-204ENST00000504044 ZNF56Q15929 161 aa12.18□□□□□ -0.46
NFKB1-204ENST00000504044 OR2D3Q8NGH3 330 aa12.18□□□□□ -0.46
NFKB1-204ENST00000504044 AP1S3Q96PC3 154 aa12.18□□□□□ -0.46
NFKB1-204ENST00000504044 SSBP4Q9BWG4 385 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-204ENST00000504044 RAB4BP61018 213 aa12.17□□□□□ -0.46
NFKB1-204ENST00000504044 Q6ZSN1 163 aa12.17□□□□□ -0.46
NFKB1-204ENST00000504044 C14orf178Q8N769 122 aaPredicted RBP12.17□□□□□ -0.46
NFKB1-204ENST00000504044 OR10AG1Q8NH19 301 aa12.17□□□□□ -0.46
NFKB1-204ENST00000504044 RAB19A4D1S5 217 aa12.16□□□□□ -0.46
NFKB1-204ENST00000504044 PSCAO43653 123 aa12.16□□□□□ -0.46
NFKB1-204ENST00000504044 CACNG7P62955 275 aa12.16□□□□□ -0.46
NFKB1-204ENST00000504044 TOR2AQ5JU69 321 aa12.16□□□□□ -0.46
NFKB1-204ENST00000504044 KCNIP4Q6PIL6 250 aa12.16□□□□□ -0.46
NFKB1-204ENST00000504044 SPATA12Q7Z6I5 190 aa12.16□□□□□ -0.46
NFKB1-204ENST00000504044 FER1L6-AS1Q8NA97 138 aa12.16□□□□□ -0.46
NFKB1-204ENST00000504044 TPPP3Q9BW30 176 aa12.16□□□□□ -0.46
NFKB1-204ENST00000504044 URGCP-MRPS24S4R325 110 aa12.16□□□□□ -0.46
NFKB1-204ENST00000504044 HECTD4Q9Y4D8 3996 aa12.15□□□□□ -0.46
NFKB1-204ENST00000504044 RBFOX3A6NFN3 312 aa12.15□□□□□ -0.46
NFKB1-204ENST00000504044 F2Z2F3 143 aa12.15□□□□□ -0.46
NFKB1-204ENST00000504044 F5H697 171 aa12.15□□□□□ -0.46
NFKB1-204ENST00000504044 TMEM250H0YL14 139 aa12.15□□□□□ -0.46
NFKB1-204ENST00000504044 LINC00694P0DN24 101 aa12.15□□□□□ -0.46
NFKB1-204ENST00000504044 ZNF575Q86XF7 245 aa12.15□□□□□ -0.46
NFKB1-204ENST00000504044 TRBV7-3A0A075B6L6 115 aa12.14□□□□□ -0.47
NFKB1-204ENST00000504044 C19orf71A6NCJ1 209 aa12.14□□□□□ -0.47
NFKB1-204ENST00000504044 IGLV2-8P01709 118 aa12.14□□□□□ -0.47
NFKB1-204ENST00000504044 Q6ZRN7 208 aaPredicted RBP12.14□□□□□ -0.47
NFKB1-204ENST00000504044 IBA57-AS1B1ANH7 110 aa12.13□□□□□ -0.47
NFKB1-204ENST00000504044 IGHV3-30P01768 117 aa12.13□□□□□ -0.47
NFKB1-204ENST00000504044 IGHV3-33P01772 117 aa12.13□□□□□ -0.47
NFKB1-204ENST00000504044 IGHV3-30-3P0DP02 117 aa12.13□□□□□ -0.47
NFKB1-204ENST00000504044 IGHV3-30-5P0DP03 117 aa12.13□□□□□ -0.47
NFKB1-204ENST00000504044 LAGE3Q14657 143 aa12.13□□□□□ -0.47
NFKB1-204ENST00000504044 PGPEP1Q9NXJ5 209 aa12.13□□□□□ -0.47
NFKB1-204ENST00000504044 H7C1H1 209 aa12.12□□□□□ -0.47
NFKB1-204ENST00000504044 SSTP61278 116 aa12.12□□□□□ -0.47
NFKB1-204ENST00000504044 OR10G8Q8NGN5 311 aa12.12□□□□□ -0.47
NFKB1-204ENST00000504044 LYPD6BQ8NI32 183 aa12.12□□□□□ -0.47
NFKB1-204ENST00000504044 TM2D2Q9BX73 214 aa12.12□□□□□ -0.47
NFKB1-204ENST00000504044 EIF5A2Q9GZV4 153 aaKnown RBP12.12□□□□□ -0.47
NFKB1-204ENST00000504044 MUC21A0A0G2JKD1 596 aa12.11□□□□□ -0.47
NFKB1-204ENST00000504044 MUC21A0A140T8X8 626 aa12.11□□□□□ -0.47
NFKB1-204ENST00000504044 TRGC1P0CF51 173 aa12.11□□□□□ -0.47
NFKB1-204ENST00000504044 NKX2-5P52952 324 aaPredicted RBP12.11□□□□□ -0.47
NFKB1-204ENST00000504044 TMEM97Q5BJF2 176 aa12.11□□□□□ -0.47
NFKB1-204ENST00000504044 CDPF1Q6NVV7 123 aa12.11□□□□□ -0.47
NFKB1-204ENST00000504044 TRBV20OR9-2A0A075B6H5 130 aa12.1□□□□□ -0.47
NFKB1-204ENST00000504044 TRAV8-3A0A0A6YYJ7 113 aa12.1□□□□□ -0.47
NFKB1-204ENST00000504044 NDUFS6O75380 124 aaKnown RBP12.1□□□□□ -0.47
NFKB1-204ENST00000504044 IGLC6P0CF74 106 aa12.1□□□□□ -0.47
NFKB1-204ENST00000504044 PKIAP61925 76 aa12.1□□□□□ -0.47
NFKB1-204ENST00000504044 ELOBQ15370 118 aa12.1□□□□□ -0.47
NFKB1-204ENST00000504044 CHCHD7Q9BUK0 85 aa12.1□□□□□ -0.47
NFKB1-204ENST00000504044 TNFRSF18Q9Y5U5 241 aa12.1□□□□□ -0.47
NFKB1-204ENST00000504044 A0A087WX48 190 aa12.09□□□□□ -0.47
NFKB1-204ENST00000504044 GZMBP10144 247 aa12.09□□□□□ -0.47
NFKB1-204ENST00000504044 CEBPGP53567 150 aa12.09□□□□□ -0.47
NFKB1-204ENST00000504044 UBE2D3P61077 147 aa12.09□□□□□ -0.47
NFKB1-204ENST00000504044 UBE2D2P62837 147 aa12.09□□□□□ -0.47
NFKB1-204ENST00000504044 RMI2Q96E14 147 aa12.09□□□□□ -0.47
NFKB1-204ENST00000504044 RPP21Q9H633 154 aaKnown RBP12.09□□□□□ -0.47
NFKB1-204ENST00000504044 Q9HAA7 133 aa12.09□□□□□ -0.47
NFKB1-204ENST00000504044 COX11Q9Y6N1 276 aa12.09□□□□□ -0.47
NFKB1-204ENST00000504044 A0A1B0GVG6 124 aa12.08□□□□□ -0.48
NFKB1-204ENST00000504044 MGPP08493 103 aa12.08□□□□□ -0.48
NFKB1-204ENST00000504044 WDR73Q6P4I2 378 aa12.08□□□□□ -0.48
NFKB1-204ENST00000504044 DAZ4Q86SG3 579 aaKnown RBP12.08□□□□□ -0.48
NFKB1-204ENST00000504044 NUDT10Q8NFP7 164 aa12.08□□□□□ -0.48
NFKB1-204ENST00000504044 NUDT11Q96G61 164 aa12.08□□□□□ -0.48
NFKB1-204ENST00000504044 DAZ3Q9NR90 486 aaKnown RBP12.08□□□□□ -0.48
NFKB1-204ENST00000504044 DNAH2Q9P225 4427 aa12.08□□□□□ -0.48
NFKB1-204ENST00000504044 A0A087WTM6 91 aa12.07□□□□□ -0.48
NFKB1-204ENST00000504044 LYZL1Q6UWQ5 148 aa12.07□□□□□ -0.48
NFKB1-204ENST00000504044 SMIM15Q7Z3B0 74 aa12.07□□□□□ -0.48
NFKB1-204ENST00000504044 NEXN-AS1Q8NBZ9 246 aa12.07□□□□□ -0.48
NFKB1-204ENST00000504044 OCC1Q8TAD7 63 aa12.07□□□□□ -0.48
NFKB1-204ENST00000504044 DNAH17Q9UFH2 4485 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms