RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 TRBV6-4A0A1B0GX49 114 aa7.75□□□□□ -1.17
VCAN-205ENST00000503923 CRYGDP07320 174 aa7.75□□□□□ -1.17
VCAN-205ENST00000503923 CTRLP40313 264 aa7.75□□□□□ -1.17
VCAN-205ENST00000503923 SSTP61278 116 aa7.75□□□□□ -1.17
VCAN-205ENST00000503923 RHOHQ15669 191 aa7.75□□□□□ -1.17
VCAN-205ENST00000503923 MRPL23Q16540 153 aaKnown RBP7.75□□□□□ -1.17
VCAN-205ENST00000503923 FAM74A4Q5TZK3 123 aa7.75□□□□□ -1.17
VCAN-205ENST00000503923 UFSP1Q6NVU6 142 aa7.75□□□□□ -1.17
VCAN-205ENST00000503923 WDR73Q6P4I2 378 aa7.75□□□□□ -1.17
VCAN-205ENST00000503923 COMMD7Q86VX2 200 aa7.75□□□□□ -1.17
VCAN-205ENST00000503923 UBE2DNLQ8IWF7 75 aa7.75□□□□□ -1.17
VCAN-205ENST00000503923 OR10G8Q8NGN5 311 aa7.75□□□□□ -1.17
VCAN-205ENST00000503923 RYR2Q92736 4967 aa7.75□□□□□ -1.17
VCAN-205ENST00000503923 A0A087WWL8 130 aa7.74□□□□□ -1.17
VCAN-205ENST00000503923 LINC00862A6NCI5 91 aa7.74□□□□□ -1.17
VCAN-205ENST00000503923 FAM231BA6NCW3 169 aa7.74□□□□□ -1.17
VCAN-205ENST00000503923 GYPEP15421 78 aa7.74□□□□□ -1.17
VCAN-205ENST00000503923 PNRC1Q12796 327 aaPredicted RBP7.74□□□□□ -1.17
VCAN-205ENST00000503923 RNF212Q495C1 297 aa7.74□□□□□ -1.17
VCAN-205ENST00000503923 SLC25A29Q8N8R3 303 aa7.74□□□□□ -1.17
VCAN-205ENST00000503923 TSKUQ8WUA8 353 aa7.74□□□□□ -1.17
VCAN-205ENST00000503923 GTSF1Q8WW33 167 aa7.74□□□□□ -1.17
VCAN-205ENST00000503923 AP1S3Q96PC3 154 aa7.74□□□□□ -1.17
VCAN-205ENST00000503923 PRADC1Q9BSG0 188 aa7.74□□□□□ -1.17
VCAN-205ENST00000503923 CNFNQ9BYD5 112 aa7.74□□□□□ -1.17
VCAN-205ENST00000503923 GFRA4Q9GZZ7 299 aa7.74□□□□□ -1.17
VCAN-205ENST00000503923 V9GYV3 84 aa7.74□□□□□ -1.17
VCAN-205ENST00000503923 TMEM218A2RU14 115 aa7.73□□□□□ -1.17
VCAN-205ENST00000503923 K7EQD1 137 aa7.73□□□□□ -1.17
VCAN-205ENST00000503923 TRGC1P0CF51 173 aa7.73□□□□□ -1.17
VCAN-205ENST00000503923 SMIM17P0DL12 118 aa7.73□□□□□ -1.17
VCAN-205ENST00000503923 SRIP30626 198 aa7.73□□□□□ -1.17
VCAN-205ENST00000503923 FOXA3P55318 350 aaPredicted RBP7.73□□□□□ -1.17
VCAN-205ENST00000503923 CCL18P55774 89 aa7.73□□□□□ -1.17
VCAN-205ENST00000503923 C14orf178Q8N769 122 aaPredicted RBP7.73□□□□□ -1.17
VCAN-205ENST00000503923 HYDINQ4G0P3 5121 aa7.73□□□□□ -1.17
VCAN-205ENST00000503923 NTF3P20783 257 aa7.72□□□□□ -1.17
VCAN-205ENST00000503923 FAM3BP58499 235 aaPredicted RBP7.72□□□□□ -1.17
VCAN-205ENST00000503923 TWIST1Q15672 202 aa7.72□□□□□ -1.17
VCAN-205ENST00000503923 Q6ZSN1 163 aa7.72□□□□□ -1.17
VCAN-205ENST00000503923 NEGR1Q7Z3B1 354 aa7.72□□□□□ -1.17
VCAN-205ENST00000503923 SH2D6Q7Z4S9 175 aa7.72□□□□□ -1.17
VCAN-205ENST00000503923 BORCS7Q96B45 105 aa7.72□□□□□ -1.17
VCAN-205ENST00000503923 PGLYRP4Q96LB8 373 aa7.72□□□□□ -1.17
VCAN-205ENST00000503923 MSRB1Q9NZV6 116 aa7.72□□□□□ -1.17
VCAN-205ENST00000503923 RYR3Q15413 4870 aa7.71□□□□□ -1.17
VCAN-205ENST00000503923 LOC100131303A0A0U1RQF7 123 aa7.71□□□□□ -1.18
VCAN-205ENST00000503923 HIGD1CA8MV81 97 aa7.71□□□□□ -1.18
VCAN-205ENST00000503923 F8W036 122 aa7.71□□□□□ -1.18
VCAN-205ENST00000503923 RAB4BP61018 213 aa7.71□□□□□ -1.18
VCAN-205ENST00000503923 ZNF56Q15929 161 aa7.71□□□□□ -1.18
VCAN-205ENST00000503923 ESRGQ1W209 222 aa7.71□□□□□ -1.18
VCAN-205ENST00000503923 LINC00588Q9Y4M8 146 aa7.71□□□□□ -1.18
VCAN-205ENST00000503923 KIF25-AS1Q9Y6Z4 181 aa7.71□□□□□ -1.18
VCAN-205ENST00000503923 TRBV10-1A0A0K0K1A3 114 aa7.7□□□□□ -1.18
VCAN-205ENST00000503923 F5H697 171 aa7.7□□□□□ -1.18
VCAN-205ENST00000503923 PPP1R2P9O14990 202 aa7.7□□□□□ -1.18
VCAN-205ENST00000503923 ADCYAP1P18509 176 aa7.7□□□□□ -1.18
VCAN-205ENST00000503923 SMIM15Q7Z3B0 74 aa7.7□□□□□ -1.18
VCAN-205ENST00000503923 SEC11CQ9BY50 192 aa7.7□□□□□ -1.18
VCAN-205ENST00000503923 DPH3P1Q9H4G8 78 aa7.7□□□□□ -1.18
VCAN-205ENST00000503923 NAT8BQ9UHF3 227 aa7.7□□□□□ -1.18
VCAN-205ENST00000503923 DNAH6Q9C0G6 4158 aa7.7□□□□□ -1.18
VCAN-205ENST00000503923 A0A1B0GUT8 65 aa7.69□□□□□ -1.18
VCAN-205ENST00000503923 SMIM27A0A1W2PRY6 76 aa7.69□□□□□ -1.18
VCAN-205ENST00000503923 GAGE12JA6NER3 117 aa7.69□□□□□ -1.18
VCAN-205ENST00000503923 MGPP08493 103 aa7.69□□□□□ -1.18
VCAN-205ENST00000503923 EVI2AP22794 236 aa7.69□□□□□ -1.18
VCAN-205ENST00000503923 LINC00315P59091 139 aa7.69□□□□□ -1.18
VCAN-205ENST00000503923 GAGE1Q13065 139 aa7.69□□□□□ -1.18
VCAN-205ENST00000503923 GAGE4Q13068 117 aa7.69□□□□□ -1.18
VCAN-205ENST00000503923 GAGE5Q13069 117 aa7.69□□□□□ -1.18
VCAN-205ENST00000503923 GAGE13Q4V321 117 aa7.69□□□□□ -1.18
VCAN-205ENST00000503923 LYPD5Q6UWN5 251 aa7.69□□□□□ -1.18
VCAN-205ENST00000503923 NUP35Q8NFH5 326 aa7.69□□□□□ -1.18
VCAN-205ENST00000503923 ANAPC16Q96DE5 110 aa7.69□□□□□ -1.18
VCAN-205ENST00000503923 MRPS16Q9Y3D3 137 aaKnown RBP7.69□□□□□ -1.18
VCAN-205ENST00000503923 KMT2AQ03164 3969 aa7.68□□□□□ -1.18
VCAN-205ENST00000503923 MT-ND4LP03901 98 aa7.68□□□□□ -1.18
VCAN-205ENST00000503923 RIGQ13278 110 aa7.68□□□□□ -1.18
VCAN-205ENST00000503923 UPK3BQ9BT76 320 aa7.68□□□□□ -1.18
VCAN-205ENST00000503923 H7C1H1 209 aa7.67□□□□□ -1.18
VCAN-205ENST00000503923 LINC00694P0DN24 101 aa7.67□□□□□ -1.18
VCAN-205ENST00000503923 TIRAPP58753 221 aa7.67□□□□□ -1.18
VCAN-205ENST00000503923 RPL36AP83881 106 aaKnown RBP7.67□□□□□ -1.18
VCAN-205ENST00000503923 ATP6V0E2Q8NHE4 81 aa7.67□□□□□ -1.18
VCAN-205ENST00000503923 ZNRF2Q8NHG8 242 aa7.67□□□□□ -1.18
VCAN-205ENST00000503923 RPL36ALQ969Q0 106 aaKnown RBP7.67□□□□□ -1.18
VCAN-205ENST00000503923 Q9UF83 564 aa7.67□□□□□ -1.18
VCAN-205ENST00000503923 TRBV7-3A0A075B6L6 115 aa7.66□□□□□ -1.18
VCAN-205ENST00000503923 C10orf91Q5T1B1 145 aa7.66□□□□□ -1.18
VCAN-205ENST00000503923 SUMO4Q6EEV6 95 aa7.66□□□□□ -1.18
VCAN-205ENST00000503923 NEXN-AS1Q8NBZ9 246 aa7.66□□□□□ -1.18
VCAN-205ENST00000503923 GTSF1LQ9H1H1 148 aa7.66□□□□□ -1.18
VCAN-205ENST00000503923 A0A1B0GW15 77 aa7.65□□□□□ -1.18
VCAN-205ENST00000503923 M0QY20 66 aa7.65□□□□□ -1.18
VCAN-205ENST00000503923 UBE2D3P61077 147 aa7.65□□□□□ -1.18
VCAN-205ENST00000503923 UBE2D2P62837 147 aa7.65□□□□□ -1.18
VCAN-205ENST00000503923 DNAJC30Q96LL9 226 aa7.65□□□□□ -1.18
VCAN-205ENST00000503923 TMEM191AQ9H0A3 160 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms