RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 RAB5CP51148 216 aa12.3□□□□□ -0.44
RNF4-204ENST00000503659 GAGE1Q13065 139 aa12.3□□□□□ -0.44
RNF4-204ENST00000503659 GAGE4Q13068 117 aa12.3□□□□□ -0.44
RNF4-204ENST00000503659 GAGE5Q13069 117 aa12.3□□□□□ -0.44
RNF4-204ENST00000503659 GAGE13Q4V321 117 aa12.3□□□□□ -0.44
RNF4-204ENST00000503659 CDPF1Q6NVV7 123 aa12.3□□□□□ -0.44
RNF4-204ENST00000503659 Q6ZNX1 250 aa12.3□□□□□ -0.44
RNF4-204ENST00000503659 BAGE2Q86Y30 109 aa12.3□□□□□ -0.44
RNF4-204ENST00000503659 SFRP2Q96HF1 295 aa12.3□□□□□ -0.44
RNF4-204ENST00000503659 MANBALQ9NQG1 85 aa12.3□□□□□ -0.44
RNF4-204ENST00000503659 GNG13Q9P2W3 67 aa12.3□□□□□ -0.44
RNF4-204ENST00000503659 A0A087WTM6 91 aa12.29□□□□□ -0.44
RNF4-204ENST00000503659 A0A087WWL8 130 aa12.29□□□□□ -0.44
RNF4-204ENST00000503659 FUSP35637 526 aaKnown RBP eCLIP12.29□□□□□ -0.44
RNF4-204ENST00000503659 FAM74A4Q5TZK3 123 aa12.29□□□□□ -0.44
RNF4-204ENST00000503659 C11orf52Q96A22 123 aa12.29□□□□□ -0.44
RNF4-204ENST00000503659 DERL1Q9BUN8 251 aa12.29□□□□□ -0.44
RNF4-204ENST00000503659 BOLA1Q9Y3E2 137 aa12.29□□□□□ -0.44
RNF4-204ENST00000503659 C1QBP02746 253 aa12.28□□□□□ -0.44
RNF4-204ENST00000503659 CXCL1P09341 107 aa12.28□□□□□ -0.44
RNF4-204ENST00000503659 RPL35P42766 123 aaKnown RBP12.28□□□□□ -0.44
RNF4-204ENST00000503659 SULT1A2P50226 295 aa12.28□□□□□ -0.44
RNF4-204ENST00000503659 EIF5AL1Q6IS14 154 aaKnown RBP12.28□□□□□ -0.44
RNF4-204ENST00000503659 ZFP82Q8N141 532 aa12.28□□□□□ -0.44
RNF4-204ENST00000503659 IBA57-AS1B1ANH7 110 aa12.27□□□□□ -0.45
RNF4-204ENST00000503659 IGHV3-30P01768 117 aa12.27□□□□□ -0.45
RNF4-204ENST00000503659 IGHV3-33P01772 117 aa12.27□□□□□ -0.45
RNF4-204ENST00000503659 IGHV3-30-3P0DP02 117 aa12.27□□□□□ -0.45
RNF4-204ENST00000503659 IGHV3-30-5P0DP03 117 aa12.27□□□□□ -0.45
RNF4-204ENST00000503659 Q8N3U1 123 aa12.27□□□□□ -0.45
RNF4-204ENST00000503659 PRR27Q6MZM9 219 aa12.26□□□□□ -0.45
RNF4-204ENST00000503659 OR10AG1Q8NH19 301 aa12.26□□□□□ -0.45
RNF4-204ENST00000503659 SLC51BQ86UW2 128 aa12.25□□□□□ -0.45
RNF4-204ENST00000503659 SNAI2O43623 268 aa12.24□□□□□ -0.45
RNF4-204ENST00000503659 IGLV2-8P01709 118 aa12.24□□□□□ -0.45
RNF4-204ENST00000503659 CENPWQ5EE01 88 aa12.24□□□□□ -0.45
RNF4-204ENST00000503659 SSBP4Q9BWG4 385 aaPredicted RBP12.24□□□□□ -0.45
RNF4-204ENST00000503659 Q9HAA7 133 aa12.24□□□□□ -0.45
RNF4-204ENST00000503659 LRCOL1A6NCL2 159 aa12.23□□□□□ -0.45
RNF4-204ENST00000503659 TEX46H3BTG2 121 aa12.23□□□□□ -0.45
RNF4-204ENST00000503659 OR5AL1P0C617 328 aa12.23□□□□□ -0.45
RNF4-204ENST00000503659 MEF2BQ02080 365 aaPredicted RBP12.22□□□□□ -0.45
RNF4-204ENST00000503659 LAGE3Q14657 143 aa12.22□□□□□ -0.45
RNF4-204ENST00000503659 C9orf62Q8N4C0 152 aa12.22□□□□□ -0.45
RNF4-204ENST00000503659 A0A087WWC5 75 aa12.21□□□□□ -0.45
RNF4-204ENST00000503659 MUC21A0A0G2JKD1 596 aa12.21□□□□□ -0.45
RNF4-204ENST00000503659 TRBV10-1A0A0K0K1A3 114 aa12.21□□□□□ -0.45
RNF4-204ENST00000503659 MUC21A0A140T8X8 626 aa12.21□□□□□ -0.45
RNF4-204ENST00000503659 RAB19A4D1S5 217 aa12.21□□□□□ -0.45
RNF4-204ENST00000503659 AKAP14Q86UN6 197 aa12.21□□□□□ -0.45
RNF4-204ENST00000503659 hCG_2014768A0A024R1R8 64 aa12.2□□□□□ -0.46
RNF4-204ENST00000503659 TRBV20OR9-2A0A075B6H5 130 aa12.2□□□□□ -0.46
RNF4-204ENST00000503659 PSCAO43653 123 aa12.2□□□□□ -0.46
RNF4-204ENST00000503659 BCL2P10415 239 aa12.2□□□□□ -0.46
RNF4-204ENST00000503659 C19orf71A6NCJ1 209 aa12.19□□□□□ -0.46
RNF4-204ENST00000503659 PDE6DO43924 150 aa12.19□□□□□ -0.46
RNF4-204ENST00000503659 IFNA1P01562 189 aa12.19□□□□□ -0.46
RNF4-204ENST00000503659 RAB4BP61018 213 aa12.19□□□□□ -0.46
RNF4-204ENST00000503659 UBE2D3P61077 147 aa12.19□□□□□ -0.46
RNF4-204ENST00000503659 UBE2D2P62837 147 aa12.19□□□□□ -0.46
RNF4-204ENST00000503659 SPANXN1Q5VSR9 72 aa12.19□□□□□ -0.46
RNF4-204ENST00000503659 DAZ4Q86SG3 579 aaKnown RBP12.19□□□□□ -0.46
RNF4-204ENST00000503659 OR10G8Q8NGN5 311 aa12.19□□□□□ -0.46
RNF4-204ENST00000503659 DAZ3Q9NR90 486 aaKnown RBP12.19□□□□□ -0.46
RNF4-204ENST00000503659 TRBV7-3A0A075B6L6 115 aa12.18□□□□□ -0.46
RNF4-204ENST00000503659 GZMBP10144 247 aa12.18□□□□□ -0.46
RNF4-204ENST00000503659 GNG4P50150 75 aa12.18□□□□□ -0.46
RNF4-204ENST00000503659 KRTAP10-1P60331 282 aa12.18□□□□□ -0.46
RNF4-204ENST00000503659 RPL36AP83881 106 aaKnown RBP12.18□□□□□ -0.46
RNF4-204ENST00000503659 ZNF56Q15929 161 aa12.18□□□□□ -0.46
RNF4-204ENST00000503659 RPL36ALQ969Q0 106 aaKnown RBP12.18□□□□□ -0.46
RNF4-204ENST00000503659 SMIM12Q96EX1 92 aa12.18□□□□□ -0.46
RNF4-204ENST00000503659 VAX2Q9UIW0 290 aa12.18□□□□□ -0.46
RNF4-204ENST00000503659 KIF25-AS1Q9Y6Z4 181 aa12.18□□□□□ -0.46
RNF4-204ENST00000503659 IGLC6P0CF74 106 aa12.17□□□□□ -0.46
RNF4-204ENST00000503659 SSTP61278 116 aa12.17□□□□□ -0.46
RNF4-204ENST00000503659 NIT1Q86X76 327 aa12.17□□□□□ -0.46
RNF4-204ENST00000503659 NEXN-AS1Q8NBZ9 246 aa12.17□□□□□ -0.46
RNF4-204ENST00000503659 MED9Q9NWA0 146 aa12.17□□□□□ -0.46
RNF4-204ENST00000503659 RBFOX3A6NFN3 312 aa12.15□□□□□ -0.46
RNF4-204ENST00000503659 XGP55808 180 aa12.15□□□□□ -0.46
RNF4-204ENST00000503659 Q8N814 137 aa12.15□□□□□ -0.46
RNF4-204ENST00000503659 OR2D3Q8NGH3 330 aa12.15□□□□□ -0.46
RNF4-204ENST00000503659 AP1S3Q96PC3 154 aa12.15□□□□□ -0.46
RNF4-204ENST00000503659 EPM2AB3EWF7 344 aa12.14□□□□□ -0.47
RNF4-204ENST00000503659 RPS20P60866 119 aaKnown RBP12.14□□□□□ -0.47
RNF4-204ENST00000503659 WFDC2Q14508 124 aa12.14□□□□□ -0.47
RNF4-204ENST00000503659 ALKAL2Q6UX46 152 aa12.14□□□□□ -0.47
RNF4-204ENST00000503659 FER1L6-AS1Q8NA97 138 aa12.14□□□□□ -0.47
RNF4-204ENST00000503659 NTN5Q8WTR8 489 aaPredicted RBP12.14□□□□□ -0.47
RNF4-204ENST00000503659 DAZAP1Q96EP5 407 aaKnown RBP12.14□□□□□ -0.47
RNF4-204ENST00000503659 DNAJC30Q96LL9 226 aa12.14□□□□□ -0.47
RNF4-204ENST00000503659 TPPP3Q9BW30 176 aa12.14□□□□□ -0.47
RNF4-204ENST00000503659 TRAV8-3A0A0A6YYJ7 113 aa12.13□□□□□ -0.47
RNF4-204ENST00000503659 GCSHP23434 173 aa12.13□□□□□ -0.47
RNF4-204ENST00000503659 TAGLN2P37802 199 aaKnown RBP12.13□□□□□ -0.47
RNF4-204ENST00000503659 TM2D2Q9BX73 214 aa12.13□□□□□ -0.47
RNF4-204ENST00000503659 URGCP-MRPS24S4R325 110 aa12.13□□□□□ -0.47
RNF4-204ENST00000503659 DNAH8Q96JB1 4490 aa12.13□□□□□ -0.47
RNF4-204ENST00000503659 F5H697 171 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms