RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 TRBV6-8A0A0A6YYG3 113 aa7.41□□□□□ -1.22
CDK9-205ENST00000498339 IGKV3D-20A0A0C4DH25 116 aa7.41□□□□□ -1.22
CDK9-205ENST00000498339 hDV102S1A0JD36 115 aa7.41□□□□□ -1.22
CDK9-205ENST00000498339 B4DEV8 164 aa7.41□□□□□ -1.22
CDK9-205ENST00000498339 SIX6O95475 246 aa7.41□□□□□ -1.22
CDK9-205ENST00000498339 H2AFB2P0C5Z0 115 aa7.41□□□□□ -1.22
CDK9-205ENST00000498339 ARL14EPLP0DKL9 152 aa7.41□□□□□ -1.22
CDK9-205ENST00000498339 LINC01600Q96MT4 127 aa7.41□□□□□ -1.22
CDK9-205ENST00000498339 IL36BQ9NZH7 164 aa7.41□□□□□ -1.22
CDK9-205ENST00000498339 KIF25-AS1Q9Y6Z4 181 aa7.41□□□□□ -1.22
CDK9-205ENST00000498339 TRBV10-1A0A0K0K1A3 114 aa7.4□□□□□ -1.22
CDK9-205ENST00000498339 M0R381 172 aa7.4□□□□□ -1.22
CDK9-205ENST00000498339 PTTG1O95997 202 aa7.4□□□□□ -1.22
CDK9-205ENST00000498339 RAB2AP61019 212 aa7.4□□□□□ -1.22
CDK9-205ENST00000498339 UBE2D3P61077 147 aa7.4□□□□□ -1.22
CDK9-205ENST00000498339 PKIAP61925 76 aa7.4□□□□□ -1.22
CDK9-205ENST00000498339 UBE2D2P62837 147 aa7.4□□□□□ -1.22
CDK9-205ENST00000498339 CIRBPQ14011 172 aaKnown RBP7.4□□□□□ -1.22
CDK9-205ENST00000498339 SAPCD1Q5SSQ6 148 aa7.4□□□□□ -1.22
CDK9-205ENST00000498339 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.4□□□□□ -1.22
CDK9-205ENST00000498339 CLRN3Q8NCR9 226 aa7.4□□□□□ -1.22
CDK9-205ENST00000498339 RNF185Q96GF1 192 aa7.4□□□□□ -1.22
CDK9-205ENST00000498339 AP5S1Q9NUS5 200 aa7.4□□□□□ -1.22
CDK9-205ENST00000498339 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.39□□□□□ -1.23
CDK9-205ENST00000498339 M0R036 132 aa7.39□□□□□ -1.23
CDK9-205ENST00000498339 PLA2G10O15496 165 aa7.39□□□□□ -1.23
CDK9-205ENST00000498339 ARMS2P0C7Q2 107 aa7.39□□□□□ -1.23
CDK9-205ENST00000498339 WDR73Q6P4I2 378 aa7.39□□□□□ -1.23
CDK9-205ENST00000498339 GTSF1Q8WW33 167 aa7.39□□□□□ -1.23
CDK9-205ENST00000498339 PHLDA3Q9Y5J5 127 aa7.39□□□□□ -1.23
CDK9-205ENST00000498339 GRIFINA4D1Z8 144 aa7.38□□□□□ -1.23
CDK9-205ENST00000498339 FABP5P3A8MUU1 101 aa7.38□□□□□ -1.23
CDK9-205ENST00000498339 H0YIZ8 118 aa7.38□□□□□ -1.23
CDK9-205ENST00000498339 TPT1P13693 172 aaKnown RBP7.38□□□□□ -1.23
CDK9-205ENST00000498339 CDC34P49427 236 aaPredicted RBP7.38□□□□□ -1.23
CDK9-205ENST00000498339 ZNF56Q15929 161 aa7.38□□□□□ -1.23
CDK9-205ENST00000498339 LINC00269Q8N2A0 174 aa7.38□□□□□ -1.23
CDK9-205ENST00000498339 SPACA4Q8TDM5 124 aa7.38□□□□□ -1.23
CDK9-205ENST00000498339 SFRP2Q96HF1 295 aa7.38□□□□□ -1.23
CDK9-205ENST00000498339 HSPB11Q9Y547 144 aa7.38□□□□□ -1.23
CDK9-205ENST00000498339 LPAP08519 4548 aa7.38□□□□□ -1.23
CDK9-205ENST00000498339 IGLV10-54A0A075B6I4 117 aa7.37□□□□□ -1.23
CDK9-205ENST00000498339 A0A0J9YXV3 536 aa7.37□□□□□ -1.23
CDK9-205ENST00000498339 FAM240BA0A1B0GVZ2 78 aa7.37□□□□□ -1.23
CDK9-205ENST00000498339 CNBPP62633 177 aaKnown RBP7.37□□□□□ -1.23
CDK9-205ENST00000498339 SUMO1P63165 101 aaKnown RBP7.37□□□□□ -1.23
CDK9-205ENST00000498339 PRR3P79522 188 aaKnown RBP7.37□□□□□ -1.23
CDK9-205ENST00000498339 EPDR1Q9UM22 224 aa7.37□□□□□ -1.23
CDK9-205ENST00000498339 ARL2-SNX15V9GYD0 113 aa7.37□□□□□ -1.23
CDK9-205ENST00000498339 TMSB15BA0A087X1C1 80 aa7.36□□□□□ -1.23
CDK9-205ENST00000498339 TRAV34A0A0B4J273 112 aa7.36□□□□□ -1.23
CDK9-205ENST00000498339 GCHFRP30047 84 aa7.36□□□□□ -1.23
CDK9-205ENST00000498339 GAGE6Q13070 117 aa7.36□□□□□ -1.23
CDK9-205ENST00000498339 REG3GQ6UW15 175 aa7.36□□□□□ -1.23
CDK9-205ENST00000498339 ZFP82Q8N141 532 aa7.36□□□□□ -1.23
CDK9-205ENST00000498339 PET100P0DJ07 73 aa7.35□□□□□ -1.23
CDK9-205ENST00000498339 RBX1P62877 108 aa7.35□□□□□ -1.23
CDK9-205ENST00000498339 CYCSP99999 105 aaKnown RBP7.35□□□□□ -1.23
CDK9-205ENST00000498339 NEXN-AS1Q8NBZ9 246 aa7.35□□□□□ -1.23
CDK9-205ENST00000498339 OR10G8Q8NGN5 311 aa7.35□□□□□ -1.23
CDK9-205ENST00000498339 PRR34Q9NV39 138 aa7.35□□□□□ -1.23
CDK9-205ENST00000498339 PLAC8Q9NZF1 115 aa7.35□□□□□ -1.23
CDK9-205ENST00000498339 IGKV2-24A0A0C4DH68 120 aa7.34□□□□□ -1.23
CDK9-205ENST00000498339 KRBOX1C9JBD0 128 aa7.34□□□□□ -1.23
CDK9-205ENST00000498339 IFNA7P01567 189 aa7.34□□□□□ -1.23
CDK9-205ENST00000498339 STAG3L2P0CL84 134 aa7.34□□□□□ -1.23
CDK9-205ENST00000498339 STAG3L3P0CL85 134 aa7.34□□□□□ -1.23
CDK9-205ENST00000498339 RPL12P30050 165 aaKnown RBP7.34□□□□□ -1.23
CDK9-205ENST00000498339 REG3AQ06141 175 aa7.34□□□□□ -1.23
CDK9-205ENST00000498339 MAJINQ3KP22 176 aa7.34□□□□□ -1.23
CDK9-205ENST00000498339 Q86TA4 180 aa7.34□□□□□ -1.23
CDK9-205ENST00000498339 LYPD6BQ8NI32 183 aa7.34□□□□□ -1.23
CDK9-205ENST00000498339 PPP1R1CQ8WVI7 109 aa7.34□□□□□ -1.23
CDK9-205ENST00000498339 RBM38Q9H0Z9 239 aaKnown RBP7.34□□□□□ -1.23
CDK9-205ENST00000498339 TRBV25-1A0A075B6N4 114 aa7.33□□□□□ -1.24
CDK9-205ENST00000498339 SH2D1AO60880 128 aa7.33□□□□□ -1.24
CDK9-205ENST00000498339 RAB5CP51148 216 aa7.33□□□□□ -1.24
CDK9-205ENST00000498339 RAB4BP61018 213 aa7.33□□□□□ -1.24
CDK9-205ENST00000498339 TMEM97Q5BJF2 176 aa7.33□□□□□ -1.24
CDK9-205ENST00000498339 KRTAP26-1Q6PEX3 210 aa7.33□□□□□ -1.24
CDK9-205ENST00000498339 RAB24Q969Q5 203 aa7.33□□□□□ -1.24
CDK9-205ENST00000498339 DERL1Q9BUN8 251 aa7.33□□□□□ -1.24
CDK9-205ENST00000498339 TMEM167BQ9NRX6 74 aa7.33□□□□□ -1.24
CDK9-205ENST00000498339 F5H697 171 aa7.32□□□□□ -1.24
CDK9-205ENST00000498339 CXorf1O96002 111 aa7.32□□□□□ -1.24
CDK9-205ENST00000498339 COX6A2Q02221 97 aa7.32□□□□□ -1.24
CDK9-205ENST00000498339 DNLZQ5SXM8 178 aa7.32□□□□□ -1.24
CDK9-205ENST00000498339 FAM162BQ5T6X4 162 aa7.32□□□□□ -1.24
CDK9-205ENST00000498339 MZT2BQ6NZ67 158 aa7.32□□□□□ -1.24
CDK9-205ENST00000498339 SPINK6Q6UWN8 80 aa7.32□□□□□ -1.24
CDK9-205ENST00000498339 STPG4Q8N801 248 aa7.32□□□□□ -1.24
CDK9-205ENST00000498339 WFDC1Q9HC57 220 aa7.32□□□□□ -1.24
CDK9-205ENST00000498339 PEX7O00628 323 aa7.31□□□□□ -1.24
CDK9-205ENST00000498339 MPC2O95563 127 aa7.31□□□□□ -1.24
CDK9-205ENST00000498339 KRTAP10-8P60410 259 aa7.31□□□□□ -1.24
CDK9-205ENST00000498339 KRTAP9-2Q9BYQ4 174 aa7.31□□□□□ -1.24
CDK9-205ENST00000498339 TRAV8-4A0A0B4J246 113 aa7.3□□□□□ -1.24
CDK9-205ENST00000498339 IGHV1-24A0A0C4DH33 117 aa7.3□□□□□ -1.24
CDK9-205ENST00000498339 MUC21A0A0G2JKD1 596 aa7.3□□□□□ -1.24
CDK9-205ENST00000498339 TRBV6-1A0A0K0K1D8 114 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms