RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 C19orf71A6NCJ1 209 aa7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 IBA57-AS1B1ANH7 110 aa7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 RHODO00212 210 aa7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 CDK2AP2O75956 126 aa7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 KRTAP10-2P60368 255 aa7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 MEF2BQ02080 365 aaPredicted RBP7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 PRR27Q6MZM9 219 aa7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 NFE4Q86UQ8 179 aa7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 DERL1Q9BUN8 251 aa7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 KIF25-AS1Q9Y6Z4 181 aa7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 IGHV3-73A0A0B4J1V6 119 aa7.33□□□□□ -1.24
SHROOM3-210ENST00000497440 TRBV10-1A0A0K0K1A3 114 aa7.33□□□□□ -1.24
SHROOM3-210ENST00000497440 EVI2AP22794 236 aa7.33□□□□□ -1.24
SHROOM3-210ENST00000497440 ZFP82Q8N141 532 aa7.33□□□□□ -1.24
SHROOM3-210ENST00000497440 C10orf126Q8N4M7 172 aa7.33□□□□□ -1.24
SHROOM3-210ENST00000497440 C14orf178Q8N769 122 aaPredicted RBP7.33□□□□□ -1.24
SHROOM3-210ENST00000497440 NHLRC2Q8NBF2 726 aa7.33□□□□□ -1.24
SHROOM3-210ENST00000497440 SYT8Q8NBV8 401 aa7.33□□□□□ -1.24
SHROOM3-210ENST00000497440 OR10G8Q8NGN5 311 aa7.33□□□□□ -1.24
SHROOM3-210ENST00000497440 ATP6V0E2Q8NHE4 81 aa7.33□□□□□ -1.24
SHROOM3-210ENST00000497440 GNG13Q9P2W3 67 aa7.33□□□□□ -1.24
SHROOM3-210ENST00000497440 PHLDA3Q9Y5J5 127 aa7.33□□□□□ -1.24
SHROOM3-210ENST00000497440 TEX46H3BTG2 121 aa7.32□□□□□ -1.24
SHROOM3-210ENST00000497440 PDE6DO43924 150 aa7.32□□□□□ -1.24
SHROOM3-210ENST00000497440 NDUFS6O75380 124 aaKnown RBP7.32□□□□□ -1.24
SHROOM3-210ENST00000497440 IGLC6P0CF74 106 aa7.32□□□□□ -1.24
SHROOM3-210ENST00000497440 TAGLN2P37802 199 aaKnown RBP7.32□□□□□ -1.24
SHROOM3-210ENST00000497440 RPL19P84098 196 aaKnown RBP7.32□□□□□ -1.24
SHROOM3-210ENST00000497440 AKAP14Q86UN6 197 aa7.32□□□□□ -1.24
SHROOM3-210ENST00000497440 MSRB1Q9NZV6 116 aa7.32□□□□□ -1.24
SHROOM3-210ENST00000497440 A0A087WTM6 91 aa7.31□□□□□ -1.24
SHROOM3-210ENST00000497440 TMSB15BA0A087X1C1 80 aa7.31□□□□□ -1.24
SHROOM3-210ENST00000497440 BCL2P10415 239 aa7.31□□□□□ -1.24
SHROOM3-210ENST00000497440 SPATA12Q7Z6I5 190 aa7.31□□□□□ -1.24
SHROOM3-210ENST00000497440 OR10AG1Q8NH19 301 aa7.31□□□□□ -1.24
SHROOM3-210ENST00000497440 PGPEP1Q9NXJ5 209 aa7.31□□□□□ -1.24
SHROOM3-210ENST00000497440 A0A087WWC5 75 aa7.3□□□□□ -1.24
SHROOM3-210ENST00000497440 RAB19A4D1S5 217 aa7.3□□□□□ -1.24
SHROOM3-210ENST00000497440 LRCOL1A6NCL2 159 aa7.3□□□□□ -1.24
SHROOM3-210ENST00000497440 C16orf90A8MZG2 172 aa7.3□□□□□ -1.24
SHROOM3-210ENST00000497440 UBE2D3P61077 147 aa7.3□□□□□ -1.24
SHROOM3-210ENST00000497440 UBE2D2P62837 147 aa7.3□□□□□ -1.24
SHROOM3-210ENST00000497440 LAGE3Q14657 143 aa7.3□□□□□ -1.24
SHROOM3-210ENST00000497440 CENPWQ5EE01 88 aa7.3□□□□□ -1.24
SHROOM3-210ENST00000497440 VAX2Q9UIW0 290 aa7.3□□□□□ -1.24
SHROOM3-210ENST00000497440 A0A087WWL8 130 aa7.29□□□□□ -1.24
SHROOM3-210ENST00000497440 TRAV8-6A0A0B4J262 113 aa7.29□□□□□ -1.24
SHROOM3-210ENST00000497440 GAGE12JA6NER3 117 aa7.29□□□□□ -1.24
SHROOM3-210ENST00000497440 M0R381 172 aa7.29□□□□□ -1.24
SHROOM3-210ENST00000497440 RAB4BP61018 213 aa7.29□□□□□ -1.24
SHROOM3-210ENST00000497440 GAGE1Q13065 139 aa7.29□□□□□ -1.24
SHROOM3-210ENST00000497440 GAGE4Q13068 117 aa7.29□□□□□ -1.24
SHROOM3-210ENST00000497440 GAGE5Q13069 117 aa7.29□□□□□ -1.24
SHROOM3-210ENST00000497440 GAGE13Q4V321 117 aa7.29□□□□□ -1.24
SHROOM3-210ENST00000497440 CNFNQ9BYD5 112 aa7.29□□□□□ -1.24
SHROOM3-210ENST00000497440 TRBV7-3A0A075B6L6 115 aa7.28□□□□□ -1.24
SHROOM3-210ENST00000497440 A0A1B0GVG6 124 aa7.28□□□□□ -1.24
SHROOM3-210ENST00000497440 TMEM250H0YL14 139 aa7.28□□□□□ -1.24
SHROOM3-210ENST00000497440 CDPF1Q6NVV7 123 aa7.28□□□□□ -1.24
SHROOM3-210ENST00000497440 WDR73Q6P4I2 378 aa7.28□□□□□ -1.24
SHROOM3-210ENST00000497440 IFNA1P01562 189 aa7.27□□□□□ -1.25
SHROOM3-210ENST00000497440 GNG4P50150 75 aa7.27□□□□□ -1.25
SHROOM3-210ENST00000497440 RPS20P60866 119 aaKnown RBP7.27□□□□□ -1.25
SHROOM3-210ENST00000497440 OR10J3Q5JRS4 329 aa7.27□□□□□ -1.25
SHROOM3-210ENST00000497440 NIT1Q86X76 327 aa7.27□□□□□ -1.25
SHROOM3-210ENST00000497440 Q8N3U1 123 aa7.27□□□□□ -1.25
SHROOM3-210ENST00000497440 KRTAP4-5Q9BYR2 181 aa7.27□□□□□ -1.25
SHROOM3-210ENST00000497440 MED9Q9NWA0 146 aa7.27□□□□□ -1.25
SHROOM3-210ENST00000497440 F2Z2F3 143 aa7.26□□□□□ -1.25
SHROOM3-210ENST00000497440 K7EN84 100 aa7.26□□□□□ -1.25
SHROOM3-210ENST00000497440 ERVFC1-1P60608 527 aa7.26□□□□□ -1.25
SHROOM3-210ENST00000497440 BLOC1S1P78537 153 aa7.26□□□□□ -1.25
SHROOM3-210ENST00000497440 FAM74A4Q5TZK3 123 aa7.26□□□□□ -1.25
SHROOM3-210ENST00000497440 ATRAIDQ6UW56 229 aa7.26□□□□□ -1.25
SHROOM3-210ENST00000497440 NEXN-AS1Q8NBZ9 246 aa7.26□□□□□ -1.25
SHROOM3-210ENST00000497440 NUDT10Q8NFP7 164 aa7.26□□□□□ -1.25
SHROOM3-210ENST00000497440 OCC1Q8TAD7 63 aa7.26□□□□□ -1.25
SHROOM3-210ENST00000497440 NUDT11Q96G61 164 aa7.26□□□□□ -1.25
SHROOM3-210ENST00000497440 CHCHD7Q9BUK0 85 aa7.26□□□□□ -1.25
SHROOM3-210ENST00000497440 RBFOX3A6NFN3 312 aa7.25□□□□□ -1.25
SHROOM3-210ENST00000497440 M0QY20 66 aa7.25□□□□□ -1.25
SHROOM3-210ENST00000497440 FOXA3P55318 350 aaPredicted RBP7.25□□□□□ -1.25
SHROOM3-210ENST00000497440 RPL36AP83881 106 aaKnown RBP7.25□□□□□ -1.25
SHROOM3-210ENST00000497440 ALKAL2Q6UX46 152 aa7.25□□□□□ -1.25
SHROOM3-210ENST00000497440 OR2D3Q8NGH3 330 aa7.25□□□□□ -1.25
SHROOM3-210ENST00000497440 RPL36ALQ969Q0 106 aaKnown RBP7.25□□□□□ -1.25
SHROOM3-210ENST00000497440 BIN3Q9NQY0 253 aa7.25□□□□□ -1.25
SHROOM3-210ENST00000497440 hCG_2014768A0A024R1R8 64 aa7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 TRBV6-8A0A0A6YYG3 113 aa7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 GZMBP10144 247 aa7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 CTRLP40313 264 aa7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 XGP55808 180 aa7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 CACNG7P62955 275 aa7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 SPANXN1Q5VSR9 72 aa7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 NTM-AS1Q6ZSK4 140 aa7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 FAM231DQ6ZW35 169 aa7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 DAZ4Q86SG3 579 aaKnown RBP7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 MAPKAPK5-AS1Q8N8E1 139 aa7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 FER1L6-AS1Q8NA97 138 aa7.24□□□□□ -1.25
SHROOM3-210ENST00000497440 DAZ3Q9NR90 486 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms