RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 SMIM12Q96EX1 92 aa12.66□□□□□ -0.38
RPN1-208ENST00000497415 Q9UF83 564 aa12.66□□□□□ -0.38
RPN1-208ENST00000497415 VAX2Q9UIW0 290 aa12.66□□□□□ -0.38
RPN1-208ENST00000497415 BOLA1Q9Y3E2 137 aa12.66□□□□□ -0.38
RPN1-208ENST00000497415 TNFRSF18Q9Y5U5 241 aa12.66□□□□□ -0.38
RPN1-208ENST00000497415 KIAA1109Q2LD37 5005 aa12.66□□□□□ -0.38
RPN1-208ENST00000497415 IGHV3-38A0A0C4DH36 116 aa12.65□□□□□ -0.38
RPN1-208ENST00000497415 A0A1B0GVG6 124 aa12.65□□□□□ -0.38
RPN1-208ENST00000497415 RAB19A4D1S5 217 aa12.65□□□□□ -0.38
RPN1-208ENST00000497415 OR5AL1P0C617 328 aa12.65□□□□□ -0.38
RPN1-208ENST00000497415 FAM74A4Q5TZK3 123 aa12.65□□□□□ -0.38
RPN1-208ENST00000497415 NFE4Q86UQ8 179 aa12.65□□□□□ -0.38
RPN1-208ENST00000497415 A0A087WWL8 130 aa12.64□□□□□ -0.39
RPN1-208ENST00000497415 TRAV8-6A0A0B4J262 113 aa12.64□□□□□ -0.39
RPN1-208ENST00000497415 GAGE12JA6NER3 117 aa12.64□□□□□ -0.39
RPN1-208ENST00000497415 GAGE1Q13065 139 aa12.64□□□□□ -0.39
RPN1-208ENST00000497415 GAGE4Q13068 117 aa12.64□□□□□ -0.39
RPN1-208ENST00000497415 GAGE5Q13069 117 aa12.64□□□□□ -0.39
RPN1-208ENST00000497415 GAGE13Q4V321 117 aa12.64□□□□□ -0.39
RPN1-208ENST00000497415 LINC01556Q5JQF7 62 aa12.64□□□□□ -0.39
RPN1-208ENST00000497415 C10orf126Q8N4M7 172 aa12.64□□□□□ -0.39
RPN1-208ENST00000497415 OR10AG1Q8NH19 301 aa12.64□□□□□ -0.39
RPN1-208ENST00000497415 MED9Q9NWA0 146 aa12.64□□□□□ -0.39
RPN1-208ENST00000497415 TRBV20OR9-2A0A075B6H5 130 aa12.63□□□□□ -0.39
RPN1-208ENST00000497415 C19orf71A6NCJ1 209 aa12.63□□□□□ -0.39
RPN1-208ENST00000497415 GNG4P50150 75 aa12.63□□□□□ -0.39
RPN1-208ENST00000497415 BLOC1S1P78537 153 aa12.63□□□□□ -0.39
RPN1-208ENST00000497415 OR10J3Q5JRS4 329 aa12.63□□□□□ -0.39
RPN1-208ENST00000497415 ALKAL2Q6UX46 152 aa12.63□□□□□ -0.39
RPN1-208ENST00000497415 MSRB1Q9NZV6 116 aa12.63□□□□□ -0.39
RPN1-208ENST00000497415 LYPD6BQ8NI32 183 aa12.62□□□□□ -0.39
RPN1-208ENST00000497415 SPATA12Q7Z6I5 190 aa12.61□□□□□ -0.39
RPN1-208ENST00000497415 TRBV10-1A0A0K0K1A3 114 aa12.6□□□□□ -0.39
RPN1-208ENST00000497415 C16orf90A8MZG2 172 aa12.6□□□□□ -0.39
RPN1-208ENST00000497415 NKX2-5P52952 324 aaPredicted RBP12.6□□□□□ -0.39
RPN1-208ENST00000497415 RPS20P60866 119 aaKnown RBP12.6□□□□□ -0.39
RPN1-208ENST00000497415 DAZAP1Q96EP5 407 aaKnown RBP12.6□□□□□ -0.39
RPN1-208ENST00000497415 IBA57-AS1B1ANH7 110 aa12.59□□□□□ -0.39
RPN1-208ENST00000497415 IGLC6P0CF74 106 aa12.59□□□□□ -0.39
RPN1-208ENST00000497415 RAB4BP61018 213 aa12.59□□□□□ -0.39
RPN1-208ENST00000497415 SPANXN1Q5VSR9 72 aa12.59□□□□□ -0.39
RPN1-208ENST00000497415 BIN3Q9NQY0 253 aa12.59□□□□□ -0.39
RPN1-208ENST00000497415 A0A087WWC5 75 aa12.58□□□□□ -0.4
RPN1-208ENST00000497415 MUC21A0A0G2JKD1 596 aa12.58□□□□□ -0.4
RPN1-208ENST00000497415 MUC21A0A140T8X8 626 aa12.58□□□□□ -0.4
RPN1-208ENST00000497415 KRTAP10-2P60368 255 aa12.58□□□□□ -0.4
RPN1-208ENST00000497415 OR2D3Q8NGH3 330 aa12.58□□□□□ -0.4
RPN1-208ENST00000497415 RBFOX3A6NFN3 312 aa12.57□□□□□ -0.4
RPN1-208ENST00000497415 GZMBP10144 247 aa12.57□□□□□ -0.4
RPN1-208ENST00000497415 OR10G8Q8NGN5 311 aa12.57□□□□□ -0.4
RPN1-208ENST00000497415 KIF25-AS1Q9Y6Z4 181 aa12.57□□□□□ -0.4
RPN1-208ENST00000497415 TRBV7-3A0A075B6L6 115 aa12.56□□□□□ -0.4
RPN1-208ENST00000497415 TMEM250H0YL14 139 aa12.56□□□□□ -0.4
RPN1-208ENST00000497415 P01737 135 aa12.56□□□□□ -0.4
RPN1-208ENST00000497415 IGHV3-30P01768 117 aa12.56□□□□□ -0.4
RPN1-208ENST00000497415 IGHV3-33P01772 117 aa12.56□□□□□ -0.4
RPN1-208ENST00000497415 IGHV3-30-3P0DP02 117 aa12.56□□□□□ -0.4
RPN1-208ENST00000497415 IGHV3-30-5P0DP03 117 aa12.56□□□□□ -0.4
RPN1-208ENST00000497415 ERVFC1-1P60608 527 aa12.56□□□□□ -0.4
RPN1-208ENST00000497415 UBE2D3P61077 147 aa12.56□□□□□ -0.4
RPN1-208ENST00000497415 UBE2D2P62837 147 aa12.56□□□□□ -0.4
RPN1-208ENST00000497415 RPL36AP83881 106 aaKnown RBP12.56□□□□□ -0.4
RPN1-208ENST00000497415 FER1L6-AS1Q8NA97 138 aa12.56□□□□□ -0.4
RPN1-208ENST00000497415 RPL36ALQ969Q0 106 aaKnown RBP12.56□□□□□ -0.4
RPN1-208ENST00000497415 LRP1BQ9NZR2 4599 aa12.55□□□□□ -0.4
RPN1-208ENST00000497415 XKRY2A2RUG3 117 aa12.55□□□□□ -0.4
RPN1-208ENST00000497415 ZNF56Q15929 161 aa12.55□□□□□ -0.4
RPN1-208ENST00000497415 NUDT10Q8NFP7 164 aa12.55□□□□□ -0.4
RPN1-208ENST00000497415 NUDT11Q96G61 164 aa12.55□□□□□ -0.4
RPN1-208ENST00000497415 RYR1P21817 5038 aa12.54□□□□□ -0.4
RPN1-208ENST00000497415 A0A087WTM6 91 aa12.54□□□□□ -0.4
RPN1-208ENST00000497415 EREGO14944 169 aa12.54□□□□□ -0.4
RPN1-208ENST00000497415 SSTP61278 116 aa12.54□□□□□ -0.4
RPN1-208ENST00000497415 LAGE3Q14657 143 aa12.54□□□□□ -0.4
RPN1-208ENST00000497415 NEXN-AS1Q8NBZ9 246 aa12.54□□□□□ -0.4
RPN1-208ENST00000497415 OCC1Q8TAD7 63 aa12.54□□□□□ -0.4
RPN1-208ENST00000497415 F2Z2F3 143 aa12.53□□□□□ -0.4
RPN1-208ENST00000497415 K7EN84 100 aa12.53□□□□□ -0.4
RPN1-208ENST00000497415 CACNG7P62955 275 aa12.53□□□□□ -0.4
RPN1-208ENST00000497415 Q8N3U1 123 aa12.53□□□□□ -0.4
RPN1-208ENST00000497415 AP1S3Q96PC3 154 aa12.53□□□□□ -0.4
RPN1-208ENST00000497415 DNAH5Q8TE73 4624 aa12.53□□□□□ -0.4
RPN1-208ENST00000497415 NDUFS6O75380 124 aaKnown RBP12.52□□□□□ -0.41
RPN1-208ENST00000497415 CDK2AP2O75956 126 aa12.52□□□□□ -0.41
RPN1-208ENST00000497415 SMIM17P0DL12 118 aa12.52□□□□□ -0.41
RPN1-208ENST00000497415 TPPP3Q9BW30 176 aa12.52□□□□□ -0.41
RPN1-208ENST00000497415 PGPEP1Q9NXJ5 209 aa12.52□□□□□ -0.41
RPN1-208ENST00000497415 NIT1Q86X76 327 aa12.51□□□□□ -0.41
RPN1-208ENST00000497415 F5H697 171 aa12.5□□□□□ -0.41
RPN1-208ENST00000497415 WDR73Q6P4I2 378 aa12.5□□□□□ -0.41
RPN1-208ENST00000497415 LYZL1Q6UWQ5 148 aa12.5□□□□□ -0.41
RPN1-208ENST00000497415 RNASE7Q9H1E1 156 aaKnown RBP12.5□□□□□ -0.41
RPN1-208ENST00000497415 LRCOL1A6NCL2 159 aa12.49□□□□□ -0.41
RPN1-208ENST00000497415 CTRLP40313 264 aa12.49□□□□□ -0.41
RPN1-208ENST00000497415 TOR2AQ5JU69 321 aa12.49□□□□□ -0.41
RPN1-208ENST00000497415 CDPF1Q6NVV7 123 aa12.49□□□□□ -0.41
RPN1-208ENST00000497415 DAZ4Q86SG3 579 aaKnown RBP12.49□□□□□ -0.41
RPN1-208ENST00000497415 FAM210AQ96ND0 272 aa12.49□□□□□ -0.41
RPN1-208ENST00000497415 RPP21Q9H633 154 aaKnown RBP12.49□□□□□ -0.41
RPN1-208ENST00000497415 Q9HAA7 133 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms