RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TIMM8BQ9Y5J9 83 aaPredicted RBP2.21□□□□□ -2.05
SNRNP48-202ENST00000496946 NHSQ6T4R5 1651 aa2.21□□□□□ -2.05
SNRNP48-202ENST00000496946 TRBV30A0A0K0K1B3 111 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 TSHBP01222 138 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 COX6CP09669 75 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 CFC1BP0CG36 223 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 CFC1P0CG37 223 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 MIFP14174 115 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV1-2P23083 117 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 ORMDL3Q8N138 153 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 SPTSSBQ8NFR3 76 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 PFN4Q8NHR9 129 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 CCL4L1Q8NHW4 92 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 TMEM141Q96I45 108 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 COL2A1P02458 1487 aaPredicted RBP2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 MGAMO43451 1857 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 TDRD6O60522 2096 aaKnown RBP2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV1-45A0A0A0MS14 117 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV3-20A0A0C4DH32 117 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 IGKV1-12A0A0C4DH73 117 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 IGKV1D-33P01593 117 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 IGKV1-33P01594 117 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 IGKV1D-12P01611 117 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 MIR17HGQ75NE6 70 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 Q96M85 177 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 TTTY13Q9BZ97 58 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 PSENENQ9NZ42 101 aa2.21□□□□□ -2.06
SNRNP48-202ENST00000496946 PCNX3Q9H6A9 2034 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 CYSRT1A8MQ03 144 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 LEPROTO15243 131 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 GNRH2O43555 120 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 IGLV2-8P01709 118 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV3-33P01772 117 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV4-39P01824 125 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV4-34P06331 123 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV4-38-2P0DP08 117 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 FXYD3Q14802 87 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 LPAL2Q16609 132 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 Q6ZR03 302 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 ZNF826PQ6ZT77 177 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 Q8N6K4 173 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 CELA1Q9UNI1 258 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 PLXNA3P51805 1871 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 GON4LQ3T8J9 2241 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 DIDO1Q9BTC0 2240 aaKnown RBP2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 IGLV3-9A0A075B6K5 115 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV1OR15-1A0A075B7D0 117 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 CPSF4LA6NMK7 179 aaKnown RBP2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 C16orf90A8MZG2 172 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 C5orf67F2Z3F1 127 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 C3orf84H3BNL1 204 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 PRSS2P07478 247 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 CISD3P0C7P0 127 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 IL9P15248 144 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 ZNF32P17041 273 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 ASB16-AS1Q495Z4 193 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 CXCL17Q6UXB2 119 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 KRTAP2-2Q9BYT5 123 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 FGF22Q9HCT0 170 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 SMAD5-AS1Q9Y6J3 95 aa2.2□□□□□ -2.06
SNRNP48-202ENST00000496946 LCTP09848 1927 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 KIAA1549LQ6ZVL6 1849 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 A0A096LNJ9 63 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 TRAV22A0A0B4J277 110 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV3-38A0A0C4DH36 116 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 TRBV10-3A0A0K0K1G6 114 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 HCG22E2RYF7 251 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 PLNP26678 52 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 Q1RN00 199 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 C15orf32Q32M92 178 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 FAM72AQ5TYM5 149 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 DEFB132Q7Z7B7 95 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 CYYR1Q96J86 154 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 CYP4F30PQ9H0H9 118 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 SND1-IT1Q9HBX3 110 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 TCF20Q9UGU0 1960 aaKnown RBP2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 HEATR1Q9H583 2144 aaKnown RBP2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 IGLV3-12A0A075B6K2 115 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 IGLV5-52A0A0A0MRZ9 124 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 IGKV6D-21A0A0A0MT36 114 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 IGKV3D-7A0A0C4DH55 119 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 ZNF815PA8K554 130 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 C19orf84I3L1E1 186 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 PLXNB1O43157 2135 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 ADAMTSL4-AS1Q5T5F5 129 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 Q6ZRP5 223 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 RMI2Q96E14 147 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 PRAC1Q96KF2 57 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 CCL28Q9NRJ3 127 aa2.19□□□□□ -2.06
SNRNP48-202ENST00000496946 A0A087WVE0 104 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 A0A087X002 238 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 IGKV6-21A0A0C4DH24 114 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 A0A1B0GW54 56 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 HIGD1CA8MV81 97 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 SH2D1AO60880 128 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 PRSS1P07477 247 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 PRB4P10163 310 aaPredicted RBP2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 EDDM3BP56851 147 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 KRTAP27-1Q3LI81 207 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 FAM167A-AS1Q96KT0 104 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms