RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 MCRIP2Q9BUT9 160 aaKnown RBP12.43□□□□□ -0.42
LMNA-216ENST00000496738 GFRA4Q9GZZ7 299 aa12.43□□□□□ -0.42
LMNA-216ENST00000496738 SNURFLB1AK76 121 aa12.43□□□□□ -0.42
LMNA-216ENST00000496738 ANXA2RQ3ZCQ2 193 aa12.42□□□□□ -0.42
LMNA-216ENST00000496738 BAGE3Q86Y29 109 aa12.42□□□□□ -0.42
LMNA-216ENST00000496738 A8MTW9 85 aa12.42□□□□□ -0.42
LMNA-216ENST00000496738 TIMM8BQ9Y5J9 83 aaPredicted RBP12.42□□□□□ -0.42
LMNA-216ENST00000496738 TRRAPQ9Y4A5 3859 aa12.41□□□□□ -0.42
LMNA-216ENST00000496738 TRAV9-2A0A087WT02 112 aa12.41□□□□□ -0.42
LMNA-216ENST00000496738 A0A1B0GW15 77 aa12.41□□□□□ -0.42
LMNA-216ENST00000496738 CRXO43186 299 aaPredicted RBP12.41□□□□□ -0.42
LMNA-216ENST00000496738 KIAA1644Q3SXP7 199 aa12.41□□□□□ -0.42
LMNA-216ENST00000496738 LYZL1Q6UWQ5 148 aa12.41□□□□□ -0.42
LMNA-216ENST00000496738 TRPT1Q86TN4 253 aaKnown RBP12.41□□□□□ -0.42
LMNA-216ENST00000496738 MRPL18Q9H0U6 180 aaKnown RBP12.41□□□□□ -0.42
LMNA-216ENST00000496738 SS18L2Q9UHA2 77 aa12.41□□□□□ -0.42
LMNA-216ENST00000496738 ARMS2P0C7Q2 107 aa12.41□□□□□ -0.42
LMNA-216ENST00000496738 C3orf79P0CE67 100 aa12.41□□□□□ -0.42
LMNA-216ENST00000496738 RBMY1A1P0DJD3 496 aaKnown RBP12.41□□□□□ -0.42
LMNA-216ENST00000496738 RBMY1CP0DJD4 496 aa12.41□□□□□ -0.42
LMNA-216ENST00000496738 RPL35AP18077 110 aaKnown RBP12.41□□□□□ -0.42
LMNA-216ENST00000496738 CAMPP49913 170 aa12.41□□□□□ -0.42
LMNA-216ENST00000496738 CMC4P56277 68 aaPredicted RBP12.41□□□□□ -0.42
LMNA-216ENST00000496738 RBMY1FQ15415 496 aaKnown RBP12.41□□□□□ -0.42
LMNA-216ENST00000496738 OXLD1Q5BKU9 147 aa12.41□□□□□ -0.42
LMNA-216ENST00000496738 GTSCR1Q86UQ5 136 aa12.41□□□□□ -0.42
LMNA-216ENST00000496738 MDFIQ99750 246 aa12.41□□□□□ -0.42
LMNA-216ENST00000496738 GNRH2O43555 120 aa12.4□□□□□ -0.42
LMNA-216ENST00000496738 ZNF324O75467 553 aaPredicted RBP12.4□□□□□ -0.42
LMNA-216ENST00000496738 NUDT3O95989 172 aa12.4□□□□□ -0.42
LMNA-216ENST00000496738 COL6A5A8TX70 2615 aa12.4□□□□□ -0.42
LMNA-216ENST00000496738 NOTCH3Q9UM47 2321 aa12.4□□□□□ -0.42
LMNA-216ENST00000496738 FAM231BA6NCW3 169 aa12.4□□□□□ -0.42
LMNA-216ENST00000496738 GAGE12HA6NDE8 117 aa12.4□□□□□ -0.42
LMNA-216ENST00000496738 SPRY2O43597 315 aa12.4□□□□□ -0.42
LMNA-216ENST00000496738 GNB1LQ9BYB4 327 aa12.4□□□□□ -0.42
LMNA-216ENST00000496738 TMEM136Q6ZRR5 245 aa12.39□□□□□ -0.43
LMNA-216ENST00000496738 XCL2Q9UBD3 114 aa12.39□□□□□ -0.43
LMNA-216ENST00000496738 F2Z2F3 143 aa12.39□□□□□ -0.43
LMNA-216ENST00000496738 IGLC6P0CF74 106 aa12.39□□□□□ -0.43
LMNA-216ENST00000496738 FOXA3P55318 350 aaPredicted RBP12.39□□□□□ -0.43
LMNA-216ENST00000496738 FAM159AQ6UWV7 190 aa12.39□□□□□ -0.43
LMNA-216ENST00000496738 SPATA25Q9BR10 227 aa12.39□□□□□ -0.43
LMNA-216ENST00000496738 H3BVH4 76 aa12.38□□□□□ -0.43
LMNA-216ENST00000496738 HTN1P15515 57 aa12.38□□□□□ -0.43
LMNA-216ENST00000496738 MT-ND6P03923 174 aa12.38□□□□□ -0.43
LMNA-216ENST00000496738 AMTP48728 403 aa12.38□□□□□ -0.43
LMNA-216ENST00000496738 COX19Q49B96 90 aa12.38□□□□□ -0.43
LMNA-216ENST00000496738 A0A1B0GUT8 65 aa12.37□□□□□ -0.43
LMNA-216ENST00000496738 K7EP34 96 aa12.37□□□□□ -0.43
LMNA-216ENST00000496738 PRM2P04554 102 aa12.37□□□□□ -0.43
LMNA-216ENST00000496738 ATOH7Q8N100 152 aa12.37□□□□□ -0.43
LMNA-216ENST00000496738 A0A1B0GXF2 115 aa12.37□□□□□ -0.43
LMNA-216ENST00000496738 HBBP68871 147 aa12.37□□□□□ -0.43
LMNA-216ENST00000496738 BORCS7Q96B45 105 aa12.37□□□□□ -0.43
LMNA-216ENST00000496738 HLA-DQA1P01909 254 aa12.36□□□□□ -0.43
LMNA-216ENST00000496738 S100A4P26447 101 aaKnown RBP12.36□□□□□ -0.43
LMNA-216ENST00000496738 ASIPP42127 132 aa12.36□□□□□ -0.43
LMNA-216ENST00000496738 KCNS1Q96KK3 526 aa12.36□□□□□ -0.43
LMNA-216ENST00000496738 RASL11AQ6T310 242 aa12.36□□□□□ -0.43
LMNA-216ENST00000496738 ATP5L2Q7Z4Y8 100 aa12.36□□□□□ -0.43
LMNA-216ENST00000496738 OR10AG1Q8NH19 301 aa12.36□□□□□ -0.43
LMNA-216ENST00000496738 IGHV1OR15-1A0A075B7D0 117 aa12.35□□□□□ -0.43
LMNA-216ENST00000496738 INSP01308 110 aa12.35□□□□□ -0.43
LMNA-216ENST00000496738 MSRB1Q9NZV6 116 aa12.35□□□□□ -0.43
LMNA-216ENST00000496738 IGHV3OR16-12A0A075B7B8 117 aa12.35□□□□□ -0.43
LMNA-216ENST00000496738 MRPL16Q9NX20 251 aaKnown RBP12.35□□□□□ -0.43
LMNA-216ENST00000496738 WIPF1O43516 503 aa12.34□□□□□ -0.43
LMNA-216ENST00000496738 RIGQ13278 110 aa12.34□□□□□ -0.43
LMNA-216ENST00000496738 TWIST1Q15672 202 aa12.34□□□□□ -0.43
LMNA-216ENST00000496738 Q8N1Y9 231 aa12.34□□□□□ -0.43
LMNA-216ENST00000496738 TEX48A0A1B0GUV7 120 aa12.33□□□□□ -0.43
LMNA-216ENST00000496738 SIVA1O15304 175 aa12.33□□□□□ -0.43
LMNA-216ENST00000496738 APCSP02743 223 aa12.33□□□□□ -0.43
LMNA-216ENST00000496738 NTF3P20783 257 aa12.33□□□□□ -0.43
LMNA-216ENST00000496738 BOD1L2Q8IYS8 172 aa12.33□□□□□ -0.43
LMNA-216ENST00000496738 OR5A1Q8NGJ0 315 aa12.33□□□□□ -0.43
LMNA-216ENST00000496738 RNASE3P12724 160 aaKnown RBP12.33□□□□□ -0.44
LMNA-216ENST00000496738 LINC01587Q99440 93 aa12.33□□□□□ -0.44
LMNA-216ENST00000496738 ST20Q9HBF5 79 aa12.33□□□□□ -0.44
LMNA-216ENST00000496738 MDFICQ9P1T7 246 aa12.33□□□□□ -0.44
LMNA-216ENST00000496738 GIG44P09565 113 aaPredicted RBP12.32□□□□□ -0.44
LMNA-216ENST00000496738 KRTAP10-11P60412 298 aa12.32□□□□□ -0.44
LMNA-216ENST00000496738 OR10J3Q5JRS4 329 aa12.32□□□□□ -0.44
LMNA-216ENST00000496738 M0R381 172 aa12.31□□□□□ -0.44
LMNA-216ENST00000496738 PMCHP20382 165 aa12.31□□□□□ -0.44
LMNA-216ENST00000496738 RPL32P62910 135 aaKnown RBP12.31□□□□□ -0.44
LMNA-216ENST00000496738 SPANXN1Q5VSR9 72 aa12.31□□□□□ -0.44
LMNA-216ENST00000496738 IGHV3-16A0A0C4DH30 117 aa12.31□□□□□ -0.44
LMNA-216ENST00000496738 SNAI2O43623 268 aa12.31□□□□□ -0.44
LMNA-216ENST00000496738 OR5AL1P0C617 328 aa12.31□□□□□ -0.44
LMNA-216ENST00000496738 C1orf158Q8N1D5 194 aa12.31□□□□□ -0.44
LMNA-216ENST00000496738 C9orf118A6NHY6 69 aa12.3□□□□□ -0.44
LMNA-216ENST00000496738 PHLDA3Q9Y5J5 127 aa12.3□□□□□ -0.44
LMNA-216ENST00000496738 SRIP30626 198 aa12.3□□□□□ -0.44
LMNA-216ENST00000496738 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.29□□□□□ -0.44
LMNA-216ENST00000496738 RPL24P83731 157 aaKnown RBP12.29□□□□□ -0.44
LMNA-216ENST00000496738 CNFNQ9BYD5 112 aa12.29□□□□□ -0.44
LMNA-216ENST00000496738 TP73-AS1Q9UF72 201 aa12.29□□□□□ -0.44
LMNA-216ENST00000496738 SEC11AP67812 179 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms