RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 GATA1P15976 413 aaPredicted RBP11.34□□□□□ -0.59
SF3A1-209ENST00000496189 RHOHQ15669 191 aa11.34□□□□□ -0.59
SF3A1-209ENST00000496189 ZFP2Q6ZN57 461 aa11.34□□□□□ -0.59
SF3A1-209ENST00000496189 UPK3BQ9BT76 320 aa11.34□□□□□ -0.59
SF3A1-209ENST00000496189 TPPP3Q9BW30 176 aa11.34□□□□□ -0.59
SF3A1-209ENST00000496189 NAT8Q9UHE5 227 aa11.34□□□□□ -0.59
SF3A1-209ENST00000496189 C1orf134Q5TEV5 83 aa11.33□□□□□ -0.6
SF3A1-209ENST00000496189 C15orf54Q8N8G6 183 aa11.33□□□□□ -0.6
SF3A1-209ENST00000496189 SFRP2Q96HF1 295 aa11.33□□□□□ -0.6
SF3A1-209ENST00000496189 IGHV3-73A0A0B4J1V6 119 aa11.32□□□□□ -0.6
SF3A1-209ENST00000496189 TRBV6-4A0A1B0GX49 114 aa11.32□□□□□ -0.6
SF3A1-209ENST00000496189 A8MWL6 223 aa11.32□□□□□ -0.6
SF3A1-209ENST00000496189 GZMBP10144 247 aa11.32□□□□□ -0.6
SF3A1-209ENST00000496189 CACNG7P62955 275 aa11.32□□□□□ -0.6
SF3A1-209ENST00000496189 Q6ZR54 194 aa11.32□□□□□ -0.6
SF3A1-209ENST00000496189 OR10AG1Q8NH19 301 aa11.32□□□□□ -0.6
SF3A1-209ENST00000496189 NACAE9PAV3 2078 aa11.32□□□□□ -0.6
SF3A1-209ENST00000496189 NXPH4O95158 308 aa11.31□□□□□ -0.6
SF3A1-209ENST00000496189 IGLC6P0CF74 106 aa11.31□□□□□ -0.6
SF3A1-209ENST00000496189 ADIRFQ15847 76 aa11.31□□□□□ -0.6
SF3A1-209ENST00000496189 CT83Q5H943 113 aa11.31□□□□□ -0.6
SF3A1-209ENST00000496189 SLC25A29Q8N8R3 303 aa11.31□□□□□ -0.6
SF3A1-209ENST00000496189 OSTCQ9NRP0 149 aa11.31□□□□□ -0.6
SF3A1-209ENST00000496189 SIVA1O15304 175 aa11.3□□□□□ -0.6
SF3A1-209ENST00000496189 SMIM17P0DL12 118 aa11.3□□□□□ -0.6
SF3A1-209ENST00000496189 RPL23P62829 140 aaKnown RBP11.3□□□□□ -0.6
SF3A1-209ENST00000496189 FAM74A4Q5TZK3 123 aa11.3□□□□□ -0.6
SF3A1-209ENST00000496189 LYPD5Q6UWN5 251 aa11.3□□□□□ -0.6
SF3A1-209ENST00000496189 SSTP61278 116 aa11.29□□□□□ -0.6
SF3A1-209ENST00000496189 WDR73Q6P4I2 378 aa11.29□□□□□ -0.6
SF3A1-209ENST00000496189 UQCC3Q6UW78 93 aa11.29□□□□□ -0.6
SF3A1-209ENST00000496189 LYZL1Q6UWQ5 148 aa11.29□□□□□ -0.6
SF3A1-209ENST00000496189 ISOC2Q96AB3 205 aa11.29□□□□□ -0.6
SF3A1-209ENST00000496189 AP1S3Q96PC3 154 aa11.29□□□□□ -0.6
SF3A1-209ENST00000496189 JPT2Q9H910 190 aa11.29□□□□□ -0.6
SF3A1-209ENST00000496189 TRAV9-2A0A087WT02 112 aa11.28□□□□□ -0.6
SF3A1-209ENST00000496189 A0A087WWL8 130 aa11.28□□□□□ -0.6
SF3A1-209ENST00000496189 MUC21A0A0G2JKD1 596 aa11.28□□□□□ -0.6
SF3A1-209ENST00000496189 MUC21A0A140T8X8 626 aa11.28□□□□□ -0.6
SF3A1-209ENST00000496189 CTRLP40313 264 aa11.28□□□□□ -0.6
SF3A1-209ENST00000496189 C6orf223Q8N319 242 aa11.28□□□□□ -0.6
SF3A1-209ENST00000496189 BORCS7Q96B45 105 aa11.28□□□□□ -0.6
SF3A1-209ENST00000496189 SAMD10Q9BYL1 202 aa11.28□□□□□ -0.6
SF3A1-209ENST00000496189 LOC100131303A0A0U1RQF7 123 aa11.27□□□□□ -0.61
SF3A1-209ENST00000496189 PRSS29PA6NIE9 313 aa11.27□□□□□ -0.61
SF3A1-209ENST00000496189 TRGC1P0CF51 173 aa11.27□□□□□ -0.61
SF3A1-209ENST00000496189 OR10G8Q8NGN5 311 aa11.27□□□□□ -0.61
SF3A1-209ENST00000496189 GFRA4Q9GZZ7 299 aa11.27□□□□□ -0.61
SF3A1-209ENST00000496189 FAM231BA6NCW3 169 aa11.26□□□□□ -0.61
SF3A1-209ENST00000496189 CRYGDP07320 174 aa11.26□□□□□ -0.61
SF3A1-209ENST00000496189 UFSP1Q6NVU6 142 aa11.26□□□□□ -0.61
SF3A1-209ENST00000496189 TSKUQ8WUA8 353 aa11.26□□□□□ -0.61
SF3A1-209ENST00000496189 TRAV8-6A0A0B4J262 113 aa11.25□□□□□ -0.61
SF3A1-209ENST00000496189 BTF3P20290 206 aaKnown RBP11.25□□□□□ -0.61
SF3A1-209ENST00000496189 NTF3P20783 257 aa11.25□□□□□ -0.61
SF3A1-209ENST00000496189 RAB4BP61018 213 aa11.25□□□□□ -0.61
SF3A1-209ENST00000496189 PNRC1Q12796 327 aaPredicted RBP11.25□□□□□ -0.61
SF3A1-209ENST00000496189 TWIST1Q15672 202 aa11.25□□□□□ -0.61
SF3A1-209ENST00000496189 SMIM15Q7Z3B0 74 aa11.25□□□□□ -0.61
SF3A1-209ENST00000496189 C14orf178Q8N769 122 aaPredicted RBP11.25□□□□□ -0.61
SF3A1-209ENST00000496189 ATP6V0E2Q8NHE4 81 aa11.25□□□□□ -0.61
SF3A1-209ENST00000496189 GTSF1Q8WW33 167 aa11.25□□□□□ -0.61
SF3A1-209ENST00000496189 F5H697 171 aa11.24□□□□□ -0.61
SF3A1-209ENST00000496189 K7EP13 123 aa11.24□□□□□ -0.61
SF3A1-209ENST00000496189 RTL8CO15255 209 aa11.24□□□□□ -0.61
SF3A1-209ENST00000496189 EVI2AP22794 236 aa11.24□□□□□ -0.61
SF3A1-209ENST00000496189 FOXA3P55318 350 aaPredicted RBP11.24□□□□□ -0.61
SF3A1-209ENST00000496189 TIRAPP58753 221 aa11.24□□□□□ -0.61
SF3A1-209ENST00000496189 ZNF56Q15929 161 aa11.24□□□□□ -0.61
SF3A1-209ENST00000496189 COMMD7Q86VX2 200 aa11.24□□□□□ -0.61
SF3A1-209ENST00000496189 CNFNQ9BYD5 112 aa11.24□□□□□ -0.61
SF3A1-209ENST00000496189 OR10J3Q5JRS4 329 aa11.23□□□□□ -0.61
SF3A1-209ENST00000496189 Q6ZSN1 163 aa11.23□□□□□ -0.61
SF3A1-209ENST00000496189 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.23□□□□□ -0.61
SF3A1-209ENST00000496189 PGLYRP4Q96LB8 373 aa11.23□□□□□ -0.61
SF3A1-209ENST00000496189 V9GYV3 84 aa11.23□□□□□ -0.61
SF3A1-209ENST00000496189 TRBV10-1A0A0K0K1A3 114 aa11.22□□□□□ -0.61
SF3A1-209ENST00000496189 LINC00862A6NCI5 91 aa11.22□□□□□ -0.61
SF3A1-209ENST00000496189 GAGE12JA6NER3 117 aa11.22□□□□□ -0.61
SF3A1-209ENST00000496189 HIGD1CA8MV81 97 aa11.22□□□□□ -0.61
SF3A1-209ENST00000496189 PPP1R2P9O14990 202 aa11.22□□□□□ -0.61
SF3A1-209ENST00000496189 EPPK1P58107 5090 aaKnown RBP11.22□□□□□ -0.61
SF3A1-209ENST00000496189 GAGE1Q13065 139 aa11.22□□□□□ -0.61
SF3A1-209ENST00000496189 GAGE4Q13068 117 aa11.22□□□□□ -0.61
SF3A1-209ENST00000496189 GAGE5Q13069 117 aa11.22□□□□□ -0.61
SF3A1-209ENST00000496189 GAGE13Q4V321 117 aa11.22□□□□□ -0.61
SF3A1-209ENST00000496189 GTSF1LQ9H1H1 148 aa11.22□□□□□ -0.61
SF3A1-209ENST00000496189 MSRB1Q9NZV6 116 aa11.22□□□□□ -0.61
SF3A1-209ENST00000496189 A0A1B0GUT8 65 aa11.21□□□□□ -0.61
SF3A1-209ENST00000496189 TMEM218A2RU14 115 aa11.21□□□□□ -0.61
SF3A1-209ENST00000496189 F8W036 122 aa11.21□□□□□ -0.61
SF3A1-209ENST00000496189 RPL36AP83881 106 aaKnown RBP11.21□□□□□ -0.61
SF3A1-209ENST00000496189 C10orf126Q8N4M7 172 aa11.21□□□□□ -0.61
SF3A1-209ENST00000496189 RPL36ALQ969Q0 106 aaKnown RBP11.21□□□□□ -0.61
SF3A1-209ENST00000496189 DPH3P1Q9H4G8 78 aa11.21□□□□□ -0.61
SF3A1-209ENST00000496189 NAT8BQ9UHF3 227 aa11.21□□□□□ -0.61
SF3A1-209ENST00000496189 DNAH10Q8IVF4 4471 aa11.2□□□□□ -0.62
SF3A1-209ENST00000496189 H7C1H1 209 aa11.2□□□□□ -0.62
SF3A1-209ENST00000496189 MGPP08493 103 aa11.2□□□□□ -0.62
SF3A1-209ENST00000496189 LELP1Q5T871 98 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms