RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 SIGMAR1Q99720 223 aa13.87□□□□□ -0.19
TSPAN4-212ENST00000494815 ZFAND2AQ8N6M9 145 aa13.86□□□□□ -0.19
TSPAN4-212ENST00000494815 ZMAT4Q9H898 229 aa13.86□□□□□ -0.19
TSPAN4-212ENST00000494815 HIGD1BQ9P298 99 aa13.86□□□□□ -0.19
TSPAN4-212ENST00000494815 F6UB75 175 aa13.86□□□□□ -0.19
TSPAN4-212ENST00000494815 CD28P10747 220 aa13.86□□□□□ -0.19
TSPAN4-212ENST00000494815 DEFB1P60022 68 aa13.86□□□□□ -0.19
TSPAN4-212ENST00000494815 FHL3Q13643 280 aa13.86□□□□□ -0.19
TSPAN4-212ENST00000494815 ZNF575Q86XF7 245 aa13.86□□□□□ -0.19
TSPAN4-212ENST00000494815 DLX4Q92988 240 aaPredicted RBP13.86□□□□□ -0.19
TSPAN4-212ENST00000494815 RNF185Q96GF1 192 aa13.86□□□□□ -0.19
TSPAN4-212ENST00000494815 DUX3Q96PT4 197 aa13.86□□□□□ -0.19
TSPAN4-212ENST00000494815 FABP2P12104 132 aa13.85□□□□□ -0.19
TSPAN4-212ENST00000494815 TSSC4Q9Y5U2 329 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-212ENST00000494815 SMIM13P0DJ93 91 aa13.85□□□□□ -0.19
TSPAN4-212ENST00000494815 FCER1GP30273 86 aa13.85□□□□□ -0.19
TSPAN4-212ENST00000494815 ODF1Q14990 250 aa13.85□□□□□ -0.19
TSPAN4-212ENST00000494815 APRG1Q8IVJ8 170 aa13.85□□□□□ -0.19
TSPAN4-212ENST00000494815 C18orf15Q96N68 181 aa13.85□□□□□ -0.19
TSPAN4-212ENST00000494815 CNFNQ9BYD5 112 aa13.85□□□□□ -0.19
TSPAN4-212ENST00000494815 CUBNO60494 3623 aa13.84□□□□□ -0.19
TSPAN4-212ENST00000494815 ZNF688P0C7X2 276 aa13.84□□□□□ -0.19
TSPAN4-212ENST00000494815 RAX2Q96IS3 184 aa13.84□□□□□ -0.19
TSPAN4-212ENST00000494815 IGKV3D-20A0A0C4DH25 116 aa13.83□□□□□ -0.19
TSPAN4-212ENST00000494815 LEPP41159 167 aa13.83□□□□□ -0.19
TSPAN4-212ENST00000494815 CKS1BP61024 79 aa13.83□□□□□ -0.19
TSPAN4-212ENST00000494815 SAMD5Q5TGI4 173 aa13.83□□□□□ -0.19
TSPAN4-212ENST00000494815 CITED2Q99967 270 aaPredicted RBP13.83□□□□□ -0.19
TSPAN4-212ENST00000494815 NXT2Q9NPJ8 142 aaKnown RBP13.83□□□□□ -0.19
TSPAN4-212ENST00000494815 C11orf21Q9P2W6 132 aa13.83□□□□□ -0.19
TSPAN4-212ENST00000494815 TRAV2A0A0B4J234 112 aa13.83□□□□□ -0.2
TSPAN4-212ENST00000494815 PRR9Q5T870 116 aa13.83□□□□□ -0.2
TSPAN4-212ENST00000494815 C11orf44Q8N8P7 122 aa13.83□□□□□ -0.2
TSPAN4-212ENST00000494815 HHLA3Q9XRX5 114 aa13.83□□□□□ -0.2
TSPAN4-212ENST00000494815 IGKV2D-26A0A0A0MRZ7 120 aa13.82□□□□□ -0.2
TSPAN4-212ENST00000494815 TRAV21A0A0B4J279 112 aa13.82□□□□□ -0.2
TSPAN4-212ENST00000494815 MSRB1Q9NZV6 116 aa13.82□□□□□ -0.2
TSPAN4-212ENST00000494815 CCL24O00175 119 aa13.82□□□□□ -0.2
TSPAN4-212ENST00000494815 GCSHP23434 173 aa13.82□□□□□ -0.2
TSPAN4-212ENST00000494815 ODF3Q96PU9 254 aa13.82□□□□□ -0.2
TSPAN4-212ENST00000494815 INAFM1C9JVW0 142 aa13.81□□□□□ -0.2
TSPAN4-212ENST00000494815 TNFRSF6BO95407 300 aa13.81□□□□□ -0.2
TSPAN4-212ENST00000494815 FXYD2P54710 66 aa13.81□□□□□ -0.2
TSPAN4-212ENST00000494815 CHAC1Q9BUX1 264 aa13.81□□□□□ -0.2
TSPAN4-212ENST00000494815 A0A0J9YX75 114 aa13.81□□□□□ -0.2
TSPAN4-212ENST00000494815 A0A1W2PRX2 142 aa13.81□□□□□ -0.2
TSPAN4-212ENST00000494815 IGKCP01834 107 aa13.81□□□□□ -0.2
TSPAN4-212ENST00000494815 EVI2AP22794 236 aa13.81□□□□□ -0.2
TSPAN4-212ENST00000494815 PROK1P58294 105 aa13.81□□□□□ -0.2
TSPAN4-212ENST00000494815 HIST2H2BDQ6DRA6 164 aa13.81□□□□□ -0.2
TSPAN4-212ENST00000494815 GAS8-AS1O95177 125 aa13.8□□□□□ -0.2
TSPAN4-212ENST00000494815 DYNLRB2Q8TF09 96 aa13.8□□□□□ -0.2
TSPAN4-212ENST00000494815 SETD2Q9BYW2 2564 aaPredicted RBP13.8□□□□□ -0.2
TSPAN4-212ENST00000494815 KLLNB2CW77 178 aa13.79□□□□□ -0.2
TSPAN4-212ENST00000494815 PRSS1P07477 247 aa13.79□□□□□ -0.2
TSPAN4-212ENST00000494815 HLA-DRB4P13762 266 aa13.79□□□□□ -0.2
TSPAN4-212ENST00000494815 HLA-DRB4X5D2U9 266 aa13.79□□□□□ -0.2
TSPAN4-212ENST00000494815 NSD1Q96L73 2696 aaPredicted RBP13.79□□□□□ -0.2
TSPAN4-212ENST00000494815 ATP5LO75964 103 aa13.79□□□□□ -0.2
TSPAN4-212ENST00000494815 TMEM61Q8N0U2 210 aa13.79□□□□□ -0.2
TSPAN4-212ENST00000494815 J3KRW8 73 aa13.78□□□□□ -0.2
TSPAN4-212ENST00000494815 FOXI2Q6ZQN5 318 aa13.78□□□□□ -0.2
TSPAN4-212ENST00000494815 TRBV25-1A0A075B6N4 114 aa13.78□□□□□ -0.2
TSPAN4-212ENST00000494815 TEX48A0A1B0GUV7 120 aa13.78□□□□□ -0.2
TSPAN4-212ENST00000494815 DPM2O94777 84 aa13.78□□□□□ -0.2
TSPAN4-212ENST00000494815 DUSP14O95147 198 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-212ENST00000494815 RNASE4P34096 147 aaKnown RBP13.78□□□□□ -0.2
TSPAN4-212ENST00000494815 DEFB114Q30KQ6 69 aa13.78□□□□□ -0.2
TSPAN4-212ENST00000494815 Q8N8P6 123 aa13.78□□□□□ -0.2
TSPAN4-212ENST00000494815 PHLDA1Q8WV24 401 aaPredicted RBP13.78□□□□□ -0.2
TSPAN4-212ENST00000494815 TMEM158Q8WZ71 300 aa13.78□□□□□ -0.2
TSPAN4-212ENST00000494815 TTTY13Q9BZ97 58 aa13.78□□□□□ -0.2
TSPAN4-212ENST00000494815 SETXQ7Z333 2677 aaKnown RBP13.77□□□□□ -0.2
TSPAN4-212ENST00000494815 Q6ZQT7 251 aa13.77□□□□□ -0.21
TSPAN4-212ENST00000494815 HIVEP1P15822 2718 aa13.77□□□□□ -0.21
TSPAN4-212ENST00000494815 TM2D2Q9BX73 214 aa13.76□□□□□ -0.21
TSPAN4-212ENST00000494815 GAGE12HA6NDE8 117 aa13.76□□□□□ -0.21
TSPAN4-212ENST00000494815 CD300EQ496F6 205 aaPredicted RBP13.76□□□□□ -0.21
TSPAN4-212ENST00000494815 GTSCR1Q86UQ5 136 aa13.76□□□□□ -0.21
TSPAN4-212ENST00000494815 CEND1Q8N111 149 aa13.76□□□□□ -0.21
TSPAN4-212ENST00000494815 IGLV2-18A0A075B6J9 118 aa13.75□□□□□ -0.21
TSPAN4-212ENST00000494815 TRAV25A0A0B4J276 109 aa13.75□□□□□ -0.21
TSPAN4-212ENST00000494815 GATA1P15976 413 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-212ENST00000494815 ZC2HC1BQ5TFG8 222 aa13.75□□□□□ -0.21
TSPAN4-212ENST00000494815 K7ERJ3 54 aa13.75□□□□□ -0.21
TSPAN4-212ENST00000494815 SPAG8Q99932 426 aaPredicted RBP13.75□□□□□ -0.21
TSPAN4-212ENST00000494815 SPATA25Q9BR10 227 aa13.74□□□□□ -0.21
TSPAN4-212ENST00000494815 NHP2Q9NX24 153 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-212ENST00000494815 FN1P02751 2386 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-212ENST00000494815 IGHV4-4A0A075B6R2 117 aa13.73□□□□□ -0.21
TSPAN4-212ENST00000494815 CRLF1O75462 422 aa13.73□□□□□ -0.21
TSPAN4-212ENST00000494815 MED14OSP0DP75 135 aa13.73□□□□□ -0.21
TSPAN4-212ENST00000494815 RPL24P83731 157 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-212ENST00000494815 ANXA2RQ3ZCQ2 193 aa13.73□□□□□ -0.21
TSPAN4-212ENST00000494815 MRAP2Q96G30 205 aa13.73□□□□□ -0.21
TSPAN4-212ENST00000494815 ADARB2-AS1A8MUL3 147 aa13.72□□□□□ -0.21
TSPAN4-212ENST00000494815 ASIPP42127 132 aa13.72□□□□□ -0.21
TSPAN4-212ENST00000494815 DEFB131AP59861 70 aa13.72□□□□□ -0.21
TSPAN4-212ENST00000494815 ZNF479Q96JC4 524 aa13.72□□□□□ -0.21
TSPAN4-212ENST00000494815 SORL1Q92673 2214 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms