RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 GAGE12JA6NER3 117 aa12.01□□□□□ -0.49
HDAC4-211ENST00000494800 CRYGDP07320 174 aa12.01□□□□□ -0.49
HDAC4-211ENST00000494800 GAGE1Q13065 139 aa12.01□□□□□ -0.49
HDAC4-211ENST00000494800 GAGE4Q13068 117 aa12.01□□□□□ -0.49
HDAC4-211ENST00000494800 GAGE5Q13069 117 aa12.01□□□□□ -0.49
HDAC4-211ENST00000494800 GAGE13Q4V321 117 aa12.01□□□□□ -0.49
HDAC4-211ENST00000494800 LELP1Q5T871 98 aa12.01□□□□□ -0.49
HDAC4-211ENST00000494800 SPANXN1Q5VSR9 72 aa12.01□□□□□ -0.49
HDAC4-211ENST00000494800 ALKAL2Q6UX46 152 aa12.01□□□□□ -0.49
HDAC4-211ENST00000494800 Q6ZSN1 163 aa12.01□□□□□ -0.49
HDAC4-211ENST00000494800 ZNF575Q86XF7 245 aa12.01□□□□□ -0.49
HDAC4-211ENST00000494800 XKRY2A2RUG3 117 aa12□□□□□ -0.49
HDAC4-211ENST00000494800 OR5AL1P0C617 328 aa12□□□□□ -0.49
HDAC4-211ENST00000494800 RPS20P60866 119 aaKnown RBP12□□□□□ -0.49
HDAC4-211ENST00000494800 MSRB1Q9NZV6 116 aa12□□□□□ -0.49
HDAC4-211ENST00000494800 A0A087WWC5 75 aa11.99□□□□□ -0.49
HDAC4-211ENST00000494800 RAB19A4D1S5 217 aa11.99□□□□□ -0.49
HDAC4-211ENST00000494800 EREGO14944 169 aa11.99□□□□□ -0.49
HDAC4-211ENST00000494800 SNAI2O43623 268 aa11.99□□□□□ -0.49
HDAC4-211ENST00000494800 LINC01556Q5JQF7 62 aa11.99□□□□□ -0.49
HDAC4-211ENST00000494800 C14orf178Q8N769 122 aaPredicted RBP11.99□□□□□ -0.49
HDAC4-211ENST00000494800 OR10AG1Q8NH19 301 aa11.99□□□□□ -0.49
HDAC4-211ENST00000494800 TRBV10-1A0A0K0K1A3 114 aa11.98□□□□□ -0.49
HDAC4-211ENST00000494800 C16orf90A8MZG2 172 aa11.98□□□□□ -0.49
HDAC4-211ENST00000494800 P01737 135 aa11.98□□□□□ -0.49
HDAC4-211ENST00000494800 SSBP4Q9BWG4 385 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-211ENST00000494800 PKD1P98161 4303 aa11.97□□□□□ -0.49
HDAC4-211ENST00000494800 SMIM17P0DL12 118 aa11.97□□□□□ -0.49
HDAC4-211ENST00000494800 ERVFC1-1P60608 527 aa11.97□□□□□ -0.49
HDAC4-211ENST00000494800 RPL36AP83881 106 aaKnown RBP11.97□□□□□ -0.49
HDAC4-211ENST00000494800 ZNF56Q15929 161 aa11.97□□□□□ -0.49
HDAC4-211ENST00000494800 OR2D3Q8NGH3 330 aa11.97□□□□□ -0.49
HDAC4-211ENST00000494800 RPL36ALQ969Q0 106 aaKnown RBP11.97□□□□□ -0.49
HDAC4-211ENST00000494800 TPPP3Q9BW30 176 aa11.97□□□□□ -0.49
HDAC4-211ENST00000494800 IGLV2-8P01709 118 aa11.96□□□□□ -0.49
HDAC4-211ENST00000494800 LINC00694P0DN24 101 aa11.96□□□□□ -0.49
HDAC4-211ENST00000494800 RAB4BP61018 213 aa11.96□□□□□ -0.49
HDAC4-211ENST00000494800 AP1S3Q96PC3 154 aa11.96□□□□□ -0.49
HDAC4-211ENST00000494800 PKHD1P08F94 4074 aa11.95□□□□□ -0.5
HDAC4-211ENST00000494800 A0A1B0GVG6 124 aa11.95□□□□□ -0.5
HDAC4-211ENST00000494800 C19orf71A6NCJ1 209 aa11.95□□□□□ -0.5
HDAC4-211ENST00000494800 RBFOX3A6NFN3 312 aa11.95□□□□□ -0.5
HDAC4-211ENST00000494800 NKX2-5P52952 324 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-211ENST00000494800 Q6ZRN7 208 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-211ENST00000494800 SPATA12Q7Z6I5 190 aa11.95□□□□□ -0.5
HDAC4-211ENST00000494800 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-211ENST00000494800 FER1L6-AS1Q8NA97 138 aa11.95□□□□□ -0.5
HDAC4-211ENST00000494800 TRBV20OR9-2A0A075B6H5 130 aa11.94□□□□□ -0.5
HDAC4-211ENST00000494800 MUC21A0A0G2JKD1 596 aa11.94□□□□□ -0.5
HDAC4-211ENST00000494800 MUC21A0A140T8X8 626 aa11.94□□□□□ -0.5
HDAC4-211ENST00000494800 F5H697 171 aa11.94□□□□□ -0.5
HDAC4-211ENST00000494800 TMEM250H0YL14 139 aa11.94□□□□□ -0.5
HDAC4-211ENST00000494800 SSTP61278 116 aa11.94□□□□□ -0.5
HDAC4-211ENST00000494800 TNFRSF18Q9Y5U5 241 aa11.94□□□□□ -0.5
HDAC4-211ENST00000494800 TRBV7-3A0A075B6L6 115 aa11.93□□□□□ -0.5
HDAC4-211ENST00000494800 F2Z2F3 143 aa11.93□□□□□ -0.5
HDAC4-211ENST00000494800 PSCAO43653 123 aa11.93□□□□□ -0.5
HDAC4-211ENST00000494800 IGHV3-30P01768 117 aa11.93□□□□□ -0.5
HDAC4-211ENST00000494800 IGHV3-33P01772 117 aa11.93□□□□□ -0.5
HDAC4-211ENST00000494800 IGHV3-30-3P0DP02 117 aa11.93□□□□□ -0.5
HDAC4-211ENST00000494800 IGHV3-30-5P0DP03 117 aa11.93□□□□□ -0.5
HDAC4-211ENST00000494800 CACNG7P62955 275 aa11.93□□□□□ -0.5
HDAC4-211ENST00000494800 LYPD6BQ8NI32 183 aa11.93□□□□□ -0.5
HDAC4-211ENST00000494800 URGCP-MRPS24S4R325 110 aa11.93□□□□□ -0.5
HDAC4-211ENST00000494800 IBA57-AS1B1ANH7 110 aa11.92□□□□□ -0.5
HDAC4-211ENST00000494800 GZMBP10144 247 aa11.92□□□□□ -0.5
HDAC4-211ENST00000494800 Q9UF83 564 aa11.92□□□□□ -0.5
HDAC4-211ENST00000494800 IGLC6P0CF74 106 aa11.91□□□□□ -0.5
HDAC4-211ENST00000494800 LAGE3Q14657 143 aa11.91□□□□□ -0.5
HDAC4-211ENST00000494800 TOR2AQ5JU69 321 aa11.91□□□□□ -0.5
HDAC4-211ENST00000494800 KCNIP4Q6PIL6 250 aa11.91□□□□□ -0.5
HDAC4-211ENST00000494800 EIF5A2Q9GZV4 153 aaKnown RBP11.91□□□□□ -0.5
HDAC4-211ENST00000494800 CEBPGP53567 150 aa11.9□□□□□ -0.5
HDAC4-211ENST00000494800 UBE2D3P61077 147 aa11.9□□□□□ -0.5
HDAC4-211ENST00000494800 UBE2D2P62837 147 aa11.9□□□□□ -0.5
HDAC4-211ENST00000494800 OR10G8Q8NGN5 311 aa11.9□□□□□ -0.5
HDAC4-211ENST00000494800 TRGC1P0CF51 173 aa11.89□□□□□ -0.51
HDAC4-211ENST00000494800 NUDT10Q8NFP7 164 aa11.89□□□□□ -0.51
HDAC4-211ENST00000494800 OCC1Q8TAD7 63 aa11.89□□□□□ -0.51
HDAC4-211ENST00000494800 NUDT11Q96G61 164 aa11.89□□□□□ -0.51
HDAC4-211ENST00000494800 RPP21Q9H633 154 aaKnown RBP11.89□□□□□ -0.51
HDAC4-211ENST00000494800 Q9HAA7 133 aa11.89□□□□□ -0.51
HDAC4-211ENST00000494800 PGPEP1Q9NXJ5 209 aa11.89□□□□□ -0.51
HDAC4-211ENST00000494800 DNAH11Q96DT5 4516 aa11.88□□□□□ -0.51
HDAC4-211ENST00000494800 H7C1H1 209 aa11.88□□□□□ -0.51
HDAC4-211ENST00000494800 TM2D2Q9BX73 214 aa11.88□□□□□ -0.51
HDAC4-211ENST00000494800 A0A087WTM6 91 aa11.87□□□□□ -0.51
HDAC4-211ENST00000494800 A0A087WX48 190 aa11.87□□□□□ -0.51
HDAC4-211ENST00000494800 TRAV8-3A0A0A6YYJ7 113 aa11.87□□□□□ -0.51
HDAC4-211ENST00000494800 NDUFS6O75380 124 aaKnown RBP11.87□□□□□ -0.51
HDAC4-211ENST00000494800 MGPP08493 103 aa11.87□□□□□ -0.51
HDAC4-211ENST00000494800 KRTAP10-2P60368 255 aa11.87□□□□□ -0.51
HDAC4-211ENST00000494800 CDPF1Q6NVV7 123 aa11.87□□□□□ -0.51
HDAC4-211ENST00000494800 LYZL1Q6UWQ5 148 aa11.87□□□□□ -0.51
HDAC4-211ENST00000494800 NEXN-AS1Q8NBZ9 246 aa11.87□□□□□ -0.51
HDAC4-211ENST00000494800 RNASE7Q9H1E1 156 aaKnown RBP11.87□□□□□ -0.51
HDAC4-211ENST00000494800 K7EN84 100 aa11.86□□□□□ -0.51
HDAC4-211ENST00000494800 ELOBQ15370 118 aa11.86□□□□□ -0.51
HDAC4-211ENST00000494800 TMEM97Q5BJF2 176 aa11.86□□□□□ -0.51
HDAC4-211ENST00000494800 WDR73Q6P4I2 378 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms