RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 IGHV3-30P01768 117 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 IGHV3-33P01772 117 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 ORM1P02763 201 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 NMBP08949 121 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 OR10J4P0C629 311 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 NBEAP1P0C6P0 100 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 IGHV3-30-3P0DP02 117 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 IGHV3-30-5P0DP03 117 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 FGF7P21781 194 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 RPL29P47914 159 aaKnown RBP3.39□□□□□ -1.87
PTCD3-219ENST00000494323 ZNF138P52744 262 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 BAXQ07812 192 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 TMEM183BQ1AE95 376 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 TMEM183AQ8IXX5 376 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 C10orf126Q8N4M7 172 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 OR4C5Q8NGB2 326 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 TXNDC17Q9BRA2 123 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 SLC25A2Q9BXI2 301 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 SLC25A31Q9H0C2 315 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 UQCC1Q9NVA1 299 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 TMEM14CQ9P0S9 112 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 PRELID1Q9Y255 219 aa3.39□□□□□ -1.87
PTCD3-219ENST00000494323 UBE2L5PA0A1B0GUS4 154 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 NAP1L6A6NFF2 107 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 IBA57-AS1B1ANH7 110 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 C9JCJ5 164 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 LECT2O14960 151 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 IL7P13232 177 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 GATA1P15976 413 aaPredicted RBP3.38□□□□□ -1.87
PTCD3-219ENST00000494323 S100A11P31949 105 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 RANP62826 216 aaKnown RBP3.38□□□□□ -1.87
PTCD3-219ENST00000494323 ASAH1Q13510 395 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 PDE6HQ13956 83 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 WFDC2Q14508 124 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 OR10J3Q5JRS4 329 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 MIR17HGQ75NE6 70 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 OR10G4Q8NGN3 311 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 ENKURQ8TC29 256 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 DEFB104AQ8WTQ1 72 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 MITD1Q8WV92 249 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 FAM167A-AS1Q96KT0 104 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 OR51M1Q9H341 326 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 DHRS4-AS1Q9P1J3 65 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 NAGKQ9UJ70 344 aa3.38□□□□□ -1.87
PTCD3-219ENST00000494323 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-219ENST00000494323 TRAV6A0A075B6T7 132 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 IGHV3-73A0A0B4J1V6 119 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 TRAV8-6A0A0B4J262 113 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 TRAV4A0A0B4J268 109 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 IGSF23A1L1A6 192 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 LYRM1O43325 122 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 PFDN1O60925 122 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 EIF3GO75821 320 aaKnown RBP eCLIP3.37□□□□□ -1.87
PTCD3-219ENST00000494323 BTCP35070 178 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 TAGLN2P37802 199 aaKnown RBP3.37□□□□□ -1.87
PTCD3-219ENST00000494323 CSN1S1P47710 185 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 SULT1A1P50225 295 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 S100A10P60903 97 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 ZNF266Q14584 549 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 LAGE3Q14657 143 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 HIGD2BQ4VC39 106 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 LINC01556Q5JQF7 62 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 TMEM252Q8N6L7 170 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 BAALCQ8WXS3 180 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 FXYD5Q96DB9 178 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 PHYHIPLQ96FC7 376 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 HYLS1Q96M11 299 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 SDHCQ99643 169 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-219ENST00000494323 SEC22CQ9BRL7 303 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 PAXXQ9BUH6 204 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 NPCDR1Q9BY65 106 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 VCX2Q9H322 139 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 C11orf1Q9H5F2 150 aa3.37□□□□□ -1.87
PTCD3-219ENST00000494323 FAM240BA0A1B0GVZ2 78 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 M0R2P5 195 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 PLA2G10O15496 165 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 C1QBP02746 253 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 PFN1P07737 140 aaKnown RBP3.36□□□□□ -1.87
PTCD3-219ENST00000494323 PVALBP20472 110 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-219ENST00000494323 HBG1P69891 147 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 HBG2P69892 147 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 IL15RAQ13261 267 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 ATP6V1FQ16864 119 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 Q6AWC8 147 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 UFSP1Q6NVU6 142 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 DPPA3Q6W0C5 159 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 SCXQ7RTU7 201 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 SH2D6Q7Z4S9 175 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 SLC25A29Q8N8R3 303 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 C2orf50Q96LR7 162 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 NMES1Q9C002 83 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 LYRM2Q9NU23 88 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-219ENST00000494323 RPH3ALQ9UNE2 315 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 UBR4Q5T4S7 5183 aa3.36□□□□□ -1.87
PTCD3-219ENST00000494323 IGKV3D-20A0A0C4DH25 116 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 RBAKDNA6NC62 111 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 PGPA6NDG6 321 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 RBFOX3A6NFN3 312 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 OR7C2O60412 319 aa3.35□□□□□ -1.87
PTCD3-219ENST00000494323 TCRBP04435 133 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms