RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 OR5AL1P0C617 328 aa11.02□□□□□ -0.65
SATB1-217ENST00000493952 Q9UF83 564 aa11.02□□□□□ -0.65
SATB1-217ENST00000493952 LINC00694P0DN24 101 aa11.01□□□□□ -0.65
SATB1-217ENST00000493952 GZMBP10144 247 aa11.01□□□□□ -0.65
SATB1-217ENST00000493952 TIRAPP58753 221 aa11.01□□□□□ -0.65
SATB1-217ENST00000493952 TOR2AQ5JU69 321 aa11.01□□□□□ -0.65
SATB1-217ENST00000493952 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
SATB1-217ENST00000493952 DAZAP1Q96EP5 407 aaKnown RBP11.01□□□□□ -0.65
SATB1-217ENST00000493952 GAGE12JA6NER3 117 aa11□□□□□ -0.65
SATB1-217ENST00000493952 TMEM250H0YL14 139 aa11□□□□□ -0.65
SATB1-217ENST00000493952 IGLC6P0CF74 106 aa11□□□□□ -0.65
SATB1-217ENST00000493952 TNP2Q05952 138 aa11□□□□□ -0.65
SATB1-217ENST00000493952 GAGE1Q13065 139 aa11□□□□□ -0.65
SATB1-217ENST00000493952 GAGE4Q13068 117 aa11□□□□□ -0.65
SATB1-217ENST00000493952 GAGE5Q13069 117 aa11□□□□□ -0.65
SATB1-217ENST00000493952 GAGE13Q4V321 117 aa11□□□□□ -0.65
SATB1-217ENST00000493952 K7EN84 100 aa10.99□□□□□ -0.65
SATB1-217ENST00000493952 P01737 135 aa10.99□□□□□ -0.65
SATB1-217ENST00000493952 LINC00315P59091 139 aa10.99□□□□□ -0.65
SATB1-217ENST00000493952 SPANXN1Q5VSR9 72 aa10.99□□□□□ -0.65
SATB1-217ENST00000493952 ATP6V0E2Q8NHE4 81 aa10.99□□□□□ -0.65
SATB1-217ENST00000493952 OCC1Q8TAD7 63 aa10.99□□□□□ -0.65
SATB1-217ENST00000493952 FAM210AQ96ND0 272 aa10.99□□□□□ -0.65
SATB1-217ENST00000493952 BIN3Q9NQY0 253 aa10.99□□□□□ -0.65
SATB1-217ENST00000493952 LY96Q9Y6Y9 160 aa10.99□□□□□ -0.65
SATB1-217ENST00000493952 DNAH10OSP0CZ25 163 aa10.98□□□□□ -0.65
SATB1-217ENST00000493952 RPS20P60866 119 aaKnown RBP10.98□□□□□ -0.65
SATB1-217ENST00000493952 SSTP61278 116 aa10.98□□□□□ -0.65
SATB1-217ENST00000493952 NUDT10Q8NFP7 164 aa10.98□□□□□ -0.65
SATB1-217ENST00000493952 NUDT11Q96G61 164 aa10.98□□□□□ -0.65
SATB1-217ENST00000493952 EIF5A2Q9GZV4 153 aaKnown RBP10.98□□□□□ -0.65
SATB1-217ENST00000493952 GTSF1LQ9H1H1 148 aa10.98□□□□□ -0.65
SATB1-217ENST00000493952 BTF3P20290 206 aaKnown RBP10.97□□□□□ -0.65
SATB1-217ENST00000493952 CEBPGP53567 150 aa10.97□□□□□ -0.65
SATB1-217ENST00000493952 TEX261Q6UWH6 196 aa10.97□□□□□ -0.65
SATB1-217ENST00000493952 FER1L6-AS1Q8NA97 138 aa10.97□□□□□ -0.65
SATB1-217ENST00000493952 TPPP3Q9BW30 176 aa10.97□□□□□ -0.65
SATB1-217ENST00000493952 RNASE7Q9H1E1 156 aaKnown RBP10.97□□□□□ -0.65
SATB1-217ENST00000493952 EVI2AP22794 236 aa10.96□□□□□ -0.65
SATB1-217ENST00000493952 OR10J3Q5JRS4 329 aa10.96□□□□□ -0.65
SATB1-217ENST00000493952 LELP1Q5T871 98 aa10.96□□□□□ -0.65
SATB1-217ENST00000493952 TRAV9-2A0A087WT02 112 aa10.95□□□□□ -0.66
SATB1-217ENST00000493952 TRAV8-6A0A0B4J262 113 aa10.95□□□□□ -0.66
SATB1-217ENST00000493952 IGHV3-38A0A0C4DH36 116 aa10.95□□□□□ -0.66
SATB1-217ENST00000493952 XKRY2A2RUG3 117 aa10.95□□□□□ -0.66
SATB1-217ENST00000493952 NDUFS6O75380 124 aaKnown RBP10.95□□□□□ -0.66
SATB1-217ENST00000493952 ZNF56Q15929 161 aa10.95□□□□□ -0.66
SATB1-217ENST00000493952 Q6ZRN7 208 aaPredicted RBP10.95□□□□□ -0.66
SATB1-217ENST00000493952 TNFRSF18Q9Y5U5 241 aa10.95□□□□□ -0.66
SATB1-217ENST00000493952 PKHD1P08F94 4074 aa10.95□□□□□ -0.66
SATB1-217ENST00000493952 SRP19P09132 144 aaKnown RBP10.94□□□□□ -0.66
SATB1-217ENST00000493952 RAB4BP61018 213 aa10.94□□□□□ -0.66
SATB1-217ENST00000493952 AP1S3Q96PC3 154 aa10.94□□□□□ -0.66
SATB1-217ENST00000493952 RPP21Q9H633 154 aaKnown RBP10.94□□□□□ -0.66
SATB1-217ENST00000493952 MSRB1Q9NZV6 116 aa10.94□□□□□ -0.66
SATB1-217ENST00000493952 KIF25-AS1Q9Y6Z4 181 aa10.94□□□□□ -0.66
SATB1-217ENST00000493952 TRBV10-1A0A0K0K1A3 114 aa10.93□□□□□ -0.66
SATB1-217ENST00000493952 K7EP13 123 aa10.93□□□□□ -0.66
SATB1-217ENST00000493952 CACNG7P62955 275 aa10.93□□□□□ -0.66
SATB1-217ENST00000493952 LINC01556Q5JQF7 62 aa10.93□□□□□ -0.66
SATB1-217ENST00000493952 LYZL1Q6UWQ5 148 aa10.93□□□□□ -0.66
SATB1-217ENST00000493952 SMIM7Q9BQ49 75 aa10.93□□□□□ -0.66
SATB1-217ENST00000493952 DNAH11Q96DT5 4516 aa10.93□□□□□ -0.66
SATB1-217ENST00000493952 F2Z2F3 143 aa10.92□□□□□ -0.66
SATB1-217ENST00000493952 CTRLP40313 264 aa10.92□□□□□ -0.66
SATB1-217ENST00000493952 RPL36AP83881 106 aaKnown RBP10.92□□□□□ -0.66
SATB1-217ENST00000493952 RPL36ALQ969Q0 106 aaKnown RBP10.92□□□□□ -0.66
SATB1-217ENST00000493952 TRBV7-3A0A075B6L6 115 aa10.91□□□□□ -0.66
SATB1-217ENST00000493952 ZNF727A8MUV8 499 aa10.91□□□□□ -0.66
SATB1-217ENST00000493952 F5H697 171 aa10.91□□□□□ -0.66
SATB1-217ENST00000493952 SMIM17P0DL12 118 aa10.91□□□□□ -0.66
SATB1-217ENST00000493952 UBE2D3P61077 147 aa10.91□□□□□ -0.66
SATB1-217ENST00000493952 UBE2D2P62837 147 aa10.91□□□□□ -0.66
SATB1-217ENST00000493952 C10orf126Q8N4M7 172 aa10.91□□□□□ -0.66
SATB1-217ENST00000493952 NEXN-AS1Q8NBZ9 246 aa10.91□□□□□ -0.66
SATB1-217ENST00000493952 OR10G8Q8NGN5 311 aa10.91□□□□□ -0.66
SATB1-217ENST00000493952 DYNC1H1Q14204 4646 aaKnown RBP10.9□□□□□ -0.66
SATB1-217ENST00000493952 A0A087WWC5 75 aa10.9□□□□□ -0.66
SATB1-217ENST00000493952 IGHV3-30P01768 117 aa10.9□□□□□ -0.66
SATB1-217ENST00000493952 IGHV3-33P01772 117 aa10.9□□□□□ -0.66
SATB1-217ENST00000493952 MGPP08493 103 aa10.9□□□□□ -0.66
SATB1-217ENST00000493952 IGHV3-30-3P0DP02 117 aa10.9□□□□□ -0.66
SATB1-217ENST00000493952 IGHV3-30-5P0DP03 117 aa10.9□□□□□ -0.66
SATB1-217ENST00000493952 FAM231DQ6ZW35 169 aa10.9□□□□□ -0.66
SATB1-217ENST00000493952 LINC01551Q86U37 167 aa10.9□□□□□ -0.66
SATB1-217ENST00000493952 Q8N3U1 123 aa10.9□□□□□ -0.66
SATB1-217ENST00000493952 GTSF1Q8WW33 167 aa10.9□□□□□ -0.66
SATB1-217ENST00000493952 GATCO43716 136 aaKnown RBP10.89□□□□□ -0.67
SATB1-217ENST00000493952 NTF3P20783 257 aa10.89□□□□□ -0.67
SATB1-217ENST00000493952 NFE4Q86UQ8 179 aa10.89□□□□□ -0.67
SATB1-217ENST00000493952 C9JQL5 133 aa10.88□□□□□ -0.67
SATB1-217ENST00000493952 TRGC1P0CF51 173 aa10.88□□□□□ -0.67
SATB1-217ENST00000493952 ERVFC1-1P60608 527 aa10.88□□□□□ -0.67
SATB1-217ENST00000493952 SRSF3P84103 164 aaKnown RBP10.88□□□□□ -0.67
SATB1-217ENST00000493952 CNFNQ9BYD5 112 aa10.88□□□□□ -0.67
SATB1-217ENST00000493952 IBA57-AS1B1ANH7 110 aa10.87□□□□□ -0.67
SATB1-217ENST00000493952 SUMO4Q6EEV6 95 aa10.87□□□□□ -0.67
SATB1-217ENST00000493952 WDR73Q6P4I2 378 aa10.87□□□□□ -0.67
SATB1-217ENST00000493952 TWIST1Q15672 202 aa10.86□□□□□ -0.67
SATB1-217ENST00000493952 CT83Q5H943 113 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms