RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 GP9P14770 177 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 SS18Q15532 418 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 MRPL55Q7Z7F7 128 aaKnown RBP5.24□□□□□ -1.57
VPS13B-205ENST00000493587 RNF185Q96GF1 192 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 GHRHP01286 108 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 IGLV2-11P01706 119 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 WT1P19544 449 aaPredicted RBP5.24□□□□□ -1.57
VPS13B-205ENST00000493587 PAPPA-AS1Q5QFB9 102 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 TMEM200BQ69YZ2 307 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 COPS9Q8WXC6 57 aa5.24□□□□□ -1.57
VPS13B-205ENST00000493587 IGKV2-40A0A087WW87 121 aaPredicted RBP5.23□□□□□ -1.57
VPS13B-205ENST00000493587 M0R1W7 72 aa5.23□□□□□ -1.57
VPS13B-205ENST00000493587 IGKV2D-40P01614 121 aaPredicted RBP5.23□□□□□ -1.57
VPS13B-205ENST00000493587 IGHG2P01859 326 aa5.23□□□□□ -1.57
VPS13B-205ENST00000493587 MAGEA5P43359 124 aa5.23□□□□□ -1.57
VPS13B-205ENST00000493587 NDPQ00604 133 aa5.23□□□□□ -1.57
VPS13B-205ENST00000493587 C9orf139Q6ZV77 190 aa5.23□□□□□ -1.57
VPS13B-205ENST00000493587 C5orf38Q86SI9 138 aa5.23□□□□□ -1.57
VPS13B-205ENST00000493587 DYNAPQ8N1N2 210 aa5.23□□□□□ -1.57
VPS13B-205ENST00000493587 HES7Q9BYE0 225 aa5.23□□□□□ -1.57
VPS13B-205ENST00000493587 NDUFC2-KCTD14E9PQ53 114 aa5.23□□□□□ -1.57
VPS13B-205ENST00000493587 MGPP08493 103 aa5.23□□□□□ -1.57
VPS13B-205ENST00000493587 SAA1P0DJI8 122 aaPredicted RBP5.23□□□□□ -1.57
VPS13B-205ENST00000493587 SAA2P0DJI9 122 aaPredicted RBP5.23□□□□□ -1.57
VPS13B-205ENST00000493587 Q96MF0 132 aa5.23□□□□□ -1.57
VPS13B-205ENST00000493587 MRPL36Q9P0J6 103 aaKnown RBP5.23□□□□□ -1.57
VPS13B-205ENST00000493587 ZNF503-AS2A6NEH8 195 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 ADARB2-AS1A8MUL3 147 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 LY6LH3BQJ8 138 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 ZNF561-AS1K7EIQ3 104 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 DAZ2Q13117 558 aaKnown RBP5.22□□□□□ -1.57
VPS13B-205ENST00000493587 ATP1A1-AS1Q5TC04 95 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 SPINK14Q6IE38 97 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 TIMM21Q9BVV7 248 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 DAZ3Q9NR90 486 aaKnown RBP5.22□□□□□ -1.57
VPS13B-205ENST00000493587 INAFM2P0DMQ5 153 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 COX6B1P14854 86 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 NRACQ8N912 160 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 SMIM2Q9BVW6 85 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 RELNP78509 3460 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 RP1L1Q8IWN7 2480 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-205ENST00000493587 TRAV23DV6A0A075B6W5 121 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 LST1O00453 97 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 TRGV3P03979 118 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 IGKV1-16P04430 117 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 C4orf48Q5BLP8 95 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 IGFL2Q6UWQ7 119 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 CACNA1GO43497 2377 aa5.22□□□□□ -1.57
VPS13B-205ENST00000493587 SORL1Q92673 2214 aa5.21□□□□□ -1.57
VPS13B-205ENST00000493587 TMEM223A0PJW6 202 aa5.21□□□□□ -1.57
VPS13B-205ENST00000493587 FAM223BA6NKX1 122 aa5.21□□□□□ -1.57
VPS13B-205ENST00000493587 TSPEAR-AS2P59090 65 aa5.21□□□□□ -1.57
VPS13B-205ENST00000493587 SNRPD3P62318 126 aaKnown RBP5.21□□□□□ -1.57
VPS13B-205ENST00000493587 FAM110DQ8TAY7 271 aaPredicted RBP5.21□□□□□ -1.57
VPS13B-205ENST00000493587 ZZEF1O43149 2961 aa5.21□□□□□ -1.58
VPS13B-205ENST00000493587 CGB1A6NKQ9 187 aa5.21□□□□□ -1.58
VPS13B-205ENST00000493587 I3L3M4 83 aa5.21□□□□□ -1.58
VPS13B-205ENST00000493587 BAALC-AS2P0C853 105 aa5.21□□□□□ -1.58
VPS13B-205ENST00000493587 Q6ZSV7 163 aa5.21□□□□□ -1.58
VPS13B-205ENST00000493587 LINC00474Q9P2X8 69 aa5.21□□□□□ -1.58
VPS13B-205ENST00000493587 DCHS2Q6V1P9 2916 aa5.21□□□□□ -1.58
VPS13B-205ENST00000493587 DOPEY2Q9Y3R5 2298 aa5.21□□□□□ -1.58
VPS13B-205ENST00000493587 IGKV1D-37A0A075B6S9 117 aa5.21□□□□□ -1.58
VPS13B-205ENST00000493587 SOSTDC1Q6X4U4 206 aa5.21□□□□□ -1.58
VPS13B-205ENST00000493587 PRRC2AP48634 2157 aaKnown RBP5.2□□□□□ -1.58
VPS13B-205ENST00000493587 OVOL3O00110 214 aa5.2□□□□□ -1.58
VPS13B-205ENST00000493587 WDR86Q86TI4 376 aa5.2□□□□□ -1.58
VPS13B-205ENST00000493587 FANCD2OSQ96PS1 177 aa5.2□□□□□ -1.58
VPS13B-205ENST00000493587 MOB4Q9Y3A3 225 aa5.2□□□□□ -1.58
VPS13B-205ENST00000493587 MAP1BP46821 2468 aaKnown RBP5.2□□□□□ -1.58
VPS13B-205ENST00000493587 PRRC2CQ9Y520 2896 aaKnown RBP5.2□□□□□ -1.58
VPS13B-205ENST00000493587 AVPP01185 164 aa5.2□□□□□ -1.58
VPS13B-205ENST00000493587 UPK3BQ9BT76 320 aa5.2□□□□□ -1.58
VPS13B-205ENST00000493587 PTPRQQ9UMZ3 2332 aa5.2□□□□□ -1.58
VPS13B-205ENST00000493587 PSMB8P28062 276 aa5.2□□□□□ -1.58
VPS13B-205ENST00000493587 DEFB121Q5J5C9 76 aa5.2□□□□□ -1.58
VPS13B-205ENST00000493587 FAM216BQ8N7L0 139 aa5.2□□□□□ -1.58
VPS13B-205ENST00000493587 DEFB124Q8NES8 71 aa5.2□□□□□ -1.58
VPS13B-205ENST00000493587 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-205ENST00000493587 M0R381 172 aa5.19□□□□□ -1.58
VPS13B-205ENST00000493587 SUMO2P61956 95 aaKnown RBP5.19□□□□□ -1.58
VPS13B-205ENST00000493587 WT1-ASQ06250 92 aa5.19□□□□□ -1.58
VPS13B-205ENST00000493587 TOMM6Q96B49 74 aa5.19□□□□□ -1.58
VPS13B-205ENST00000493587 TTTY12Q9BZ98 90 aa5.19□□□□□ -1.58
VPS13B-205ENST00000493587 IGLV2-18A0A075B6J9 118 aa5.18□□□□□ -1.58
VPS13B-205ENST00000493587 EIF4EBP3O60516 100 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-205ENST00000493587 FSTL3O95633 263 aa5.18□□□□□ -1.58
VPS13B-205ENST00000493587 S100A4P26447 101 aaKnown RBP5.18□□□□□ -1.58
VPS13B-205ENST00000493587 XCL1P47992 114 aa5.18□□□□□ -1.58
VPS13B-205ENST00000493587 IGFL4Q6B9Z1 124 aa5.18□□□□□ -1.58
VPS13B-205ENST00000493587 GFRALQ6UXV0 394 aa5.18□□□□□ -1.58
VPS13B-205ENST00000493587 STHQ8IWL8 128 aa5.18□□□□□ -1.58
VPS13B-205ENST00000493587 THAP8Q8NA92 274 aa5.18□□□□□ -1.58
VPS13B-205ENST00000493587 TMEM190Q8WZ59 177 aa5.18□□□□□ -1.58
VPS13B-205ENST00000493587 XCL2Q9UBD3 114 aa5.18□□□□□ -1.58
VPS13B-205ENST00000493587 FAM19A1Q7Z5A9 133 aa5.18□□□□□ -1.58
VPS13B-205ENST00000493587 KLF14Q8TD94 323 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-205ENST00000493587 ZNF625Q96I27 306 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-205ENST00000493587 ZNF71Q9NQZ8 489 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-205ENST00000493587 SNURFQ9Y675 71 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms