RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 LINC00694P0DN24 101 aa18.29■□□□□ 0.52
SH3GL3-204ENST00000492099 CCL20P78556 96 aa18.29■□□□□ 0.52
SH3GL3-204ENST00000492099 FAM74A4Q5TZK3 123 aa18.29■□□□□ 0.52
SH3GL3-204ENST00000492099 CXCL1P09341 107 aa18.28■□□□□ 0.52
SH3GL3-204ENST00000492099 C14orf178Q8N769 122 aaPredicted RBP18.28■□□□□ 0.52
SH3GL3-204ENST00000492099 IBA57-AS1B1ANH7 110 aa18.27■□□□□ 0.52
SH3GL3-204ENST00000492099 SULT1A2P50226 295 aa18.27■□□□□ 0.52
SH3GL3-204ENST00000492099 A0A087WTM6 91 aa18.26■□□□□ 0.51
SH3GL3-204ENST00000492099 A0A087WWL8 130 aa18.26■□□□□ 0.51
SH3GL3-204ENST00000492099 C1QBP02746 253 aa18.26■□□□□ 0.51
SH3GL3-204ENST00000492099 RPL35P42766 123 aaKnown RBP18.26■□□□□ 0.51
SH3GL3-204ENST00000492099 C11orf52Q96A22 123 aa18.26■□□□□ 0.51
SH3GL3-204ENST00000492099 PCLOQ9Y6V0 5065 aa18.25■□□□□ 0.51
SH3GL3-204ENST00000492099 CDPF1Q6NVV7 123 aa18.25■□□□□ 0.51
SH3GL3-204ENST00000492099 Q6ZNX1 250 aa18.25■□□□□ 0.51
SH3GL3-204ENST00000492099 SLC51BQ86UW2 128 aa18.25■□□□□ 0.51
SH3GL3-204ENST00000492099 Q9UF83 564 aa18.25■□□□□ 0.51
SH3GL3-204ENST00000492099 A0A087WWC5 75 aa18.24■□□□□ 0.51
SH3GL3-204ENST00000492099 IGHV3-30P01768 117 aa18.24■□□□□ 0.51
SH3GL3-204ENST00000492099 IGHV3-33P01772 117 aa18.24■□□□□ 0.51
SH3GL3-204ENST00000492099 IGHV3-30-3P0DP02 117 aa18.24■□□□□ 0.51
SH3GL3-204ENST00000492099 IGHV3-30-5P0DP03 117 aa18.24■□□□□ 0.51
SH3GL3-204ENST00000492099 RPL19P84098 196 aaKnown RBP18.24■□□□□ 0.51
SH3GL3-204ENST00000492099 PRR27Q6MZM9 219 aa18.24■□□□□ 0.51
SH3GL3-204ENST00000492099 TRBV10-1A0A0K0K1A3 114 aa18.21■□□□□ 0.51
SH3GL3-204ENST00000492099 PSCAO43653 123 aa18.21■□□□□ 0.51
SH3GL3-204ENST00000492099 DERL1Q9BUN8 251 aa18.21■□□□□ 0.51
SH3GL3-204ENST00000492099 SSBP4Q9BWG4 385 aaPredicted RBP18.21■□□□□ 0.51
SH3GL3-204ENST00000492099 HSPG2P98160 4391 aa18.21■□□□□ 0.51
SH3GL3-204ENST00000492099 SNAI2O43623 268 aa18.2■□□□□ 0.5
SH3GL3-204ENST00000492099 IFNA1P01562 189 aa18.2■□□□□ 0.5
SH3GL3-204ENST00000492099 OR5AL1P0C617 328 aa18.2■□□□□ 0.5
SH3GL3-204ENST00000492099 LAGE3Q14657 143 aa18.2■□□□□ 0.5
SH3GL3-204ENST00000492099 OR10AG1Q8NH19 301 aa18.2■□□□□ 0.5
SH3GL3-204ENST00000492099 PDE6DO43924 150 aa18.19■□□□□ 0.5
SH3GL3-204ENST00000492099 MEF2BQ02080 365 aaPredicted RBP18.19■□□□□ 0.5
SH3GL3-204ENST00000492099 RPL36AP83881 106 aaKnown RBP18.18■□□□□ 0.5
SH3GL3-204ENST00000492099 CENPWQ5EE01 88 aa18.18■□□□□ 0.5
SH3GL3-204ENST00000492099 RPL36ALQ969Q0 106 aaKnown RBP18.18■□□□□ 0.5
SH3GL3-204ENST00000492099 Q9HAA7 133 aa18.18■□□□□ 0.5
SH3GL3-204ENST00000492099 DNAH5Q8TE73 4624 aa18.18■□□□□ 0.5
SH3GL3-204ENST00000492099 RAB4BP61018 213 aa18.17■□□□□ 0.5
SH3GL3-204ENST00000492099 SPANXN1Q5VSR9 72 aa18.17■□□□□ 0.5
SH3GL3-204ENST00000492099 AKAP14Q86UN6 197 aa18.17■□□□□ 0.5
SH3GL3-204ENST00000492099 MAPKAPK5-AS1Q8N8E1 139 aa18.17■□□□□ 0.5
SH3GL3-204ENST00000492099 SMIM12Q96EX1 92 aa18.17■□□□□ 0.5
SH3GL3-204ENST00000492099 DAZAP1Q96EP5 407 aaKnown RBP18.16■□□□□ 0.5
SH3GL3-204ENST00000492099 TRBV7-3A0A075B6L6 115 aa18.15■□□□□ 0.5
SH3GL3-204ENST00000492099 FUSP35637 526 aaKnown RBP eCLIP18.15■□□□□ 0.5
SH3GL3-204ENST00000492099 BCL2P10415 239 aa18.14■□□□□ 0.49
SH3GL3-204ENST00000492099 TAGLN2P37802 199 aaKnown RBP18.14■□□□□ 0.49
SH3GL3-204ENST00000492099 GNG4P50150 75 aa18.14■□□□□ 0.49
SH3GL3-204ENST00000492099 TOR2AQ5JU69 321 aa18.14■□□□□ 0.49
SH3GL3-204ENST00000492099 TM2D2Q9BX73 214 aa18.14■□□□□ 0.49
SH3GL3-204ENST00000492099 VAX2Q9UIW0 290 aa18.14■□□□□ 0.49
SH3GL3-204ENST00000492099 APOBP04114 4563 aaKnown RBP18.13■□□□□ 0.49
SH3GL3-204ENST00000492099 LRCOL1A6NCL2 159 aa18.13■□□□□ 0.49
SH3GL3-204ENST00000492099 IGLV2-8P01709 118 aa18.13■□□□□ 0.49
SH3GL3-204ENST00000492099 ZNF56Q15929 161 aa18.13■□□□□ 0.49
SH3GL3-204ENST00000492099 OR10G8Q8NGN5 311 aa18.13■□□□□ 0.49
SH3GL3-204ENST00000492099 MED9Q9NWA0 146 aa18.13■□□□□ 0.49
SH3GL3-204ENST00000492099 TRAV8-3A0A0A6YYJ7 113 aa18.12■□□□□ 0.49
SH3GL3-204ENST00000492099 MUC21A0A0G2JKD1 596 aa18.12■□□□□ 0.49
SH3GL3-204ENST00000492099 MUC21A0A140T8X8 626 aa18.12■□□□□ 0.49
SH3GL3-204ENST00000492099 RAB19A4D1S5 217 aa18.12■□□□□ 0.49
SH3GL3-204ENST00000492099 RPS20P60866 119 aaKnown RBP18.12■□□□□ 0.49
SH3GL3-204ENST00000492099 UBE2D3P61077 147 aa18.12■□□□□ 0.49
SH3GL3-204ENST00000492099 UBE2D2P62837 147 aa18.12■□□□□ 0.49
SH3GL3-204ENST00000492099 Q8N3U1 123 aa18.12■□□□□ 0.49
SH3GL3-204ENST00000492099 KRTAP4-5Q9BYR2 181 aa18.12■□□□□ 0.49
SH3GL3-204ENST00000492099 URGCP-MRPS24S4R325 110 aa18.12■□□□□ 0.49
SH3GL3-204ENST00000492099 DAZ4Q86SG3 579 aaKnown RBP18.11■□□□□ 0.49
SH3GL3-204ENST00000492099 C9orf62Q8N4C0 152 aa18.11■□□□□ 0.49
SH3GL3-204ENST00000492099 BIN3Q9NQY0 253 aa18.11■□□□□ 0.49
SH3GL3-204ENST00000492099 DAZ3Q9NR90 486 aaKnown RBP18.11■□□□□ 0.49
SH3GL3-204ENST00000492099 hCG_2014768A0A024R1R8 64 aa18.1■□□□□ 0.49
SH3GL3-204ENST00000492099 C19orf71A6NCJ1 209 aa18.1■□□□□ 0.49
SH3GL3-204ENST00000492099 NIT1Q86X76 327 aa18.1■□□□□ 0.49
SH3GL3-204ENST00000492099 Q8N1X5 172 aa18.1■□□□□ 0.49
SH3GL3-204ENST00000492099 OR2D3Q8NGH3 330 aa18.1■□□□□ 0.49
SH3GL3-204ENST00000492099 SMIM17P0DL12 118 aa18.09■□□□□ 0.49
SH3GL3-204ENST00000492099 SSTP61278 116 aa18.09■□□□□ 0.49
SH3GL3-204ENST00000492099 XKRY2A2RUG3 117 aa18.08■□□□□ 0.48
SH3GL3-204ENST00000492099 F5H697 171 aa18.08■□□□□ 0.48
SH3GL3-204ENST00000492099 FER1L6-AS1Q8NA97 138 aa18.08■□□□□ 0.48
SH3GL3-204ENST00000492099 NEXN-AS1Q8NBZ9 246 aa18.08■□□□□ 0.48
SH3GL3-204ENST00000492099 NTN5Q8WTR8 489 aaPredicted RBP18.08■□□□□ 0.48
SH3GL3-204ENST00000492099 AP1S3Q96PC3 154 aa18.08■□□□□ 0.48
SH3GL3-204ENST00000492099 CHCHD7Q9BUK0 85 aa18.08■□□□□ 0.48
SH3GL3-204ENST00000492099 P01737 135 aa18.07■□□□□ 0.48
SH3GL3-204ENST00000492099 IGLC6P0CF74 106 aa18.07■□□□□ 0.48
SH3GL3-204ENST00000492099 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.07■□□□□ 0.48
SH3GL3-204ENST00000492099 TPPP3Q9BW30 176 aa18.07■□□□□ 0.48
SH3GL3-204ENST00000492099 TRBV20OR9-2A0A075B6H5 130 aa18.06■□□□□ 0.48
SH3GL3-204ENST00000492099 GZMBP10144 247 aa18.06■□□□□ 0.48
SH3GL3-204ENST00000492099 GCSHP23434 173 aa18.06■□□□□ 0.48
SH3GL3-204ENST00000492099 KCNIP4Q6PIL6 250 aa18.06■□□□□ 0.48
SH3GL3-204ENST00000492099 Q8N814 137 aa18.06■□□□□ 0.48
SH3GL3-204ENST00000492099 COX11Q9Y6N1 276 aa18.06■□□□□ 0.48
SH3GL3-204ENST00000492099 KIF25-AS1Q9Y6Z4 181 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms