RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 HRNRQ86YZ3 2850 aaPredicted RBP0.08□□□□□ -2.4
SEMA3A-207ENST00000490883 AKAP11Q9UKA4 1901 aa0.07□□□□□ -2.4
SEMA3A-207ENST00000490883 GVQW2A0A096LPI5 108 aaPredicted RBP0.07□□□□□ -2.4
SEMA3A-207ENST00000490883 F2Z2F3 143 aa0.07□□□□□ -2.4
SEMA3A-207ENST00000490883 IGLC6P0CF74 106 aa0.07□□□□□ -2.4
SEMA3A-207ENST00000490883 SSBP1Q04837 148 aaKnown RBP0.07□□□□□ -2.4
SEMA3A-207ENST00000490883 LINC01545Q5VT33 79 aa0.07□□□□□ -2.4
SEMA3A-207ENST00000490883 CYP2G1PQ6ZSU1 146 aa0.07□□□□□ -2.4
SEMA3A-207ENST00000490883 BPESC1Q9GZL8 116 aa0.07□□□□□ -2.4
SEMA3A-207ENST00000490883 SAR1AQ9NR31 198 aa0.07□□□□□ -2.4
SEMA3A-207ENST00000490883 ERCC6Q03468 1493 aa0.07□□□□□ -2.4
SEMA3A-207ENST00000490883 TNS1Q9HBL0 1735 aaKnown RBP0.07□□□□□ -2.4
SEMA3A-207ENST00000490883 ASXL3Q9C0F0 2248 aa0.06□□□□□ -2.4
SEMA3A-207ENST00000490883 SOGA1O94964 1423 aa0.06□□□□□ -2.4
SEMA3A-207ENST00000490883 NCOR2Q9Y618 2525 aa0.06□□□□□ -2.4
SEMA3A-207ENST00000490883 CKS1BP61024 79 aa0.06□□□□□ -2.4
SEMA3A-207ENST00000490883 MYH6P13533 1939 aa0.06□□□□□ -2.4
SEMA3A-207ENST00000490883 CDK13Q14004 1512 aaKnown RBP0.06□□□□□ -2.4
SEMA3A-207ENST00000490883 OVOS2A0A0J9YW53 1432 aa0.05□□□□□ -2.4
SEMA3A-207ENST00000490883 OVOS2Q6IE36 1432 aa0.05□□□□□ -2.4
SEMA3A-207ENST00000490883 ARPC5O15511 151 aa0.05□□□□□ -2.4
SEMA3A-207ENST00000490883 TSPAN19P0C672 248 aa0.05□□□□□ -2.4
SEMA3A-207ENST00000490883 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.05□□□□□ -2.4
SEMA3A-207ENST00000490883 BATF3Q9NR55 127 aa0.05□□□□□ -2.4
SEMA3A-207ENST00000490883 DMBT1Q9UGM3 2413 aaPredicted RBP0.05□□□□□ -2.4
SEMA3A-207ENST00000490883 TRAV12-3A0A0B4J271 114 aa0.04□□□□□ -2.4
SEMA3A-207ENST00000490883 FAM236AA0A1B0GUQ0 79 aa0.04□□□□□ -2.4
SEMA3A-207ENST00000490883 FAM236BA0A1B0GV22 79 aa0.04□□□□□ -2.4
SEMA3A-207ENST00000490883 C20orf197Q8N268 126 aa0.04□□□□□ -2.4
SEMA3A-207ENST00000490883 COX7B2Q8TF08 81 aa0.04□□□□□ -2.4
SEMA3A-207ENST00000490883 Q96NJ1 140 aa0.04□□□□□ -2.4
SEMA3A-207ENST00000490883 NDUFA12Q9UI09 145 aa0.04□□□□□ -2.4
SEMA3A-207ENST00000490883 ARHGEF10O15013 1369 aa0.04□□□□□ -2.4
SEMA3A-207ENST00000490883 DISP2A7MBM2 1401 aa0.04□□□□□ -2.4
SEMA3A-207ENST00000490883 PHIPQ8WWQ0 1821 aa0.03□□□□□ -2.4
SEMA3A-207ENST00000490883 LINC00694P0DN24 101 aa0.03□□□□□ -2.4
SEMA3A-207ENST00000490883 SPCS2Q15005 226 aa0.03□□□□□ -2.4
SEMA3A-207ENST00000490883 Q5BKY6 102 aa0.03□□□□□ -2.4
SEMA3A-207ENST00000490883 C4orf33Q8N1A6 199 aa0.03□□□□□ -2.4
SEMA3A-207ENST00000490883 VSTM2AQ8TAG5 236 aa0.03□□□□□ -2.4
SEMA3A-207ENST00000490883 SMIM11BQ8TCY0 68 aa0.03□□□□□ -2.4
SEMA3A-207ENST00000490883 SSPOA2VEC9 5147 aa0.03□□□□□ -2.41
SEMA3A-207ENST00000490883 CACNA1CQ13936 2221 aa0.02□□□□□ -2.41
SEMA3A-207ENST00000490883 PITX3O75364 302 aa0.02□□□□□ -2.41
SEMA3A-207ENST00000490883 COX4I1P13073 169 aa0.02□□□□□ -2.41
SEMA3A-207ENST00000490883 MIC13Q5XKP0 118 aa0.02□□□□□ -2.41
SEMA3A-207ENST00000490883 CELSR1Q9NYQ6 3014 aa0.02□□□□□ -2.41
SEMA3A-207ENST00000490883 TRBV7-1A0A0A6YYK4 115 aa0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 NCR2O95944 276 aa0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 SPINK1P00995 79 aa0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 SMIM3Q9BZL3 60 aa0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 GSKIPQ9P0R6 139 aa0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 COL7A1Q02388 2944 aa0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 SSC5DA1L4H1 1573 aa0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 LAMC3Q9Y6N6 1575 aa0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 AHCTF1Q8WYP5 2266 aa0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 UNC79Q9P2D8 2635 aa0□□□□□ -2.41
SEMA3A-207ENST00000490883 M0R129 80 aa0□□□□□ -2.41
SEMA3A-207ENST00000490883 COX6A2Q02221 97 aa0□□□□□ -2.41
SEMA3A-207ENST00000490883 FAM74A4Q5TZK3 123 aa0□□□□□ -2.41
SEMA3A-207ENST00000490883 SLC48A1Q6P1K1 146 aa0□□□□□ -2.41
SEMA3A-207ENST00000490883 CTAGE3PQ8IX95 158 aa0□□□□□ -2.41
SEMA3A-207ENST00000490883 TMEM242Q9NWH2 141 aa0□□□□□ -2.41
SEMA3A-207ENST00000490883 V9GYV3 84 aa0□□□□□ -2.41
SEMA3A-207ENST00000490883 MUC22E2RYF6 1773 aaPredicted RBP-0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 PRG4Q92954 1404 aaPredicted RBP-0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 J3QR89 54 aa-0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 M0R2Z0 102 aa-0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 PIRTP0C851 137 aa-0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 ALX1Q15699 326 aa-0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 SPANXN1Q5VSR9 72 aa-0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 PARP14Q460N5 1801 aa-0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 LAMB1P07942 1786 aa-0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 NRXN2Q9P2S2 1712 aa-0.01□□□□□ -2.41
SEMA3A-207ENST00000490883 ADGRB1O14514 1584 aa-0.02□□□□□ -2.41
SEMA3A-207ENST00000490883 LOC105371267A0A1B0GV96 52 aa-0.02□□□□□ -2.41
SEMA3A-207ENST00000490883 NMBP08949 121 aa-0.02□□□□□ -2.41
SEMA3A-207ENST00000490883 C9orf116Q5BN46 136 aaPredicted RBP-0.02□□□□□ -2.41
SEMA3A-207ENST00000490883 UNC13AQ9UPW8 1703 aa-0.02□□□□□ -2.41
SEMA3A-207ENST00000490883 UNC13BO14795 1591 aa-0.02□□□□□ -2.41
SEMA3A-207ENST00000490883 APODP05090 189 aa-0.03□□□□□ -2.41
SEMA3A-207ENST00000490883 Q6ZRX8 168 aa-0.03□□□□□ -2.41
SEMA3A-207ENST00000490883 LZICQ8WZA0 190 aa-0.03□□□□□ -2.41
SEMA3A-207ENST00000490883 CHD9Q3L8U1 2897 aa-0.04□□□□□ -2.42
SEMA3A-207ENST00000490883 Q6ZUT4 128 aa-0.04□□□□□ -2.42
SEMA3A-207ENST00000490883 UBR5O95071 2799 aaPredicted RBP-0.04□□□□□ -2.42
SEMA3A-207ENST00000490883 ARFGEF1Q9Y6D6 1849 aa-0.04□□□□□ -2.42
SEMA3A-207ENST00000490883 HIVEP3Q5T1R4 2406 aa-0.05□□□□□ -2.42
SEMA3A-207ENST00000490883 TRGV1A0A0A0MS02 117 aa-0.05□□□□□ -2.42
SEMA3A-207ENST00000490883 ACYP2P14621 99 aa-0.05□□□□□ -2.42
SEMA3A-207ENST00000490883 INSL4Q14641 139 aa-0.05□□□□□ -2.42
SEMA3A-207ENST00000490883 MAFIPQ8WZ33 124 aa-0.05□□□□□ -2.42
SEMA3A-207ENST00000490883 RPRMQ9NS64 109 aa-0.05□□□□□ -2.42
SEMA3A-207ENST00000490883 CEP152O94986 1710 aa-0.06□□□□□ -2.42
SEMA3A-207ENST00000490883 CLPSL1A2RUU4 121 aa-0.06□□□□□ -2.42
SEMA3A-207ENST00000490883 TMEM14DPA8MWL7 114 aa-0.06□□□□□ -2.42
SEMA3A-207ENST00000490883 NPFFO15130 113 aa-0.06□□□□□ -2.42
SEMA3A-207ENST00000490883 UBE2G1P62253 170 aa-0.06□□□□□ -2.42
SEMA3A-207ENST00000490883 C10orf82Q8WW14 230 aa-0.06□□□□□ -2.42
SEMA3A-207ENST00000490883 IBTKQ9P2D0 1353 aaPredicted RBP-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms