RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 KIR2DL5BQ8NHK3 375 aa5.45□□□□□ -1.54
CLDN1-202ENST00000490800 GNB1LQ9BYB4 327 aa5.45□□□□□ -1.54
CLDN1-202ENST00000490800 CNFNQ9BYD5 112 aa5.45□□□□□ -1.54
CLDN1-202ENST00000490800 CSTL1Q9H114 145 aa5.45□□□□□ -1.54
CLDN1-202ENST00000490800 XCL2Q9UBD3 114 aa5.45□□□□□ -1.54
CLDN1-202ENST00000490800 IGHV3-16A0A0C4DH30 117 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 C1orf196B1AJZ1 125 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 SNURFLB1AK76 121 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 F2Z2F3 143 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 H3BVH4 76 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 LY6G6CO95867 125 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 OR5AL1P0C617 328 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 RNASE3P12724 160 aaKnown RBP5.44□□□□□ -1.54
CLDN1-202ENST00000490800 ASIPP42127 132 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 CAMPP49913 170 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 NUTF2P61970 127 aaKnown RBP5.44□□□□□ -1.54
CLDN1-202ENST00000490800 COX19Q49B96 90 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 WDR73Q6P4I2 378 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 MORN3Q6PF18 240 aaPredicted RBP5.44□□□□□ -1.54
CLDN1-202ENST00000490800 CEMP1Q6PRD7 247 aaPredicted RBP5.44□□□□□ -1.54
CLDN1-202ENST00000490800 C1orf158Q8N1D5 194 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 GATD1Q8NB37 220 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 KCNS1Q96KK3 526 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 C20orf144Q9BQM9 153 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 LINC00467Q9BRT7 94 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 SCRT2Q9NQ03 307 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 TP53TG3Q9ULZ0 132 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 TRAPPC1Q9Y5R8 145 aa5.44□□□□□ -1.54
CLDN1-202ENST00000490800 MUC4Q99102 2169 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 IGHV4-4A0A075B6R2 117 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 A0A1B0GW15 77 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 HLA-DQA1P01909 254 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 MT-ND6P03923 174 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 S100A4P26447 101 aaKnown RBP5.43□□□□□ -1.54
CLDN1-202ENST00000490800 RAB4BP61018 213 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 SSTP61278 116 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 CACNG7P62955 275 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 FABP9Q0Z7S8 132 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 ZFP82Q8N141 532 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 OR10AG1Q8NH19 301 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 LINC00476Q8WZB0 136 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 FRZBQ92765 325 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 BORCS7Q96B45 105 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 C9orf85Q96MD7 179 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 LINC01587Q99440 93 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 MSRB1Q9NZV6 116 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 MDFICQ9P1T7 246 aa5.43□□□□□ -1.54
CLDN1-202ENST00000490800 TIMM8BQ9Y5J9 83 aaPredicted RBP5.43□□□□□ -1.54
CLDN1-202ENST00000490800 NUPR2A6NF83 97 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 CBY3A6NI87 242 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 NXPH4O95158 308 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 TNFRSF6BO95407 300 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 APCSP02743 223 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 PRM2P04554 102 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 S100A8P05109 93 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 NTF3P20783 257 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 RAB5BP61020 215 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 SLAQ13239 276 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 TWIST1Q15672 202 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 ZNF493Q6ZR52 646 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 TMEM256Q8N2U0 113 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 CSNK1G2-AS1Q8NCQ2 148 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 OR11H2Q8NH07 326 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 DKK2Q9UBU2 259 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 ALMS1Q8TCU4 4167 aa5.42□□□□□ -1.54
CLDN1-202ENST00000490800 HIST1H2BKO60814 126 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 HIST1H2BJP06899 126 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 TRGC1P0CF51 173 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 HIST1H2BOP23527 126 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 HIST1H2BBP33778 126 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 HIST1H2BDP58876 126 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 HIST1H2BCP62807 126 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 HIST2H2BEQ16778 126 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 KIAA1644Q3SXP7 199 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.41□□□□□ -1.54
CLDN1-202ENST00000490800 SPANXN1Q5VSR9 72 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 C11orf72Q8NBR9 251 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 PHLDA1Q8WV24 401 aaPredicted RBP5.41□□□□□ -1.54
CLDN1-202ENST00000490800 HIST1H2BHQ93079 126 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 HIST1H2BNQ99877 126 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 HIST1H2BMQ99879 126 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 C1QTNF4Q9BXJ3 329 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 KLK5Q9Y337 293 aaPredicted RBP5.41□□□□□ -1.54
CLDN1-202ENST00000490800 GOLT1BQ9Y3E0 138 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 PHLDA3Q9Y5J5 127 aa5.41□□□□□ -1.54
CLDN1-202ENST00000490800 IGHV3OR16-12A0A075B7B8 117 aa5.4□□□□□ -1.54
CLDN1-202ENST00000490800 M0R381 172 aa5.4□□□□□ -1.54
CLDN1-202ENST00000490800 DEFB4AO15263 64 aa5.4□□□□□ -1.54
CLDN1-202ENST00000490800 HTN1P15515 57 aa5.4□□□□□ -1.54
CLDN1-202ENST00000490800 AZU1P20160 251 aa5.4□□□□□ -1.54
CLDN1-202ENST00000490800 NANOS2P60321 138 aaKnown RBP5.4□□□□□ -1.54
CLDN1-202ENST00000490800 FAM104BQ5XKR9 115 aa5.4□□□□□ -1.54
CLDN1-202ENST00000490800 ZNF705AQ6ZN79 300 aaPredicted RBP5.4□□□□□ -1.54
CLDN1-202ENST00000490800 C11orf45Q8TAV5 145 aa5.4□□□□□ -1.54
CLDN1-202ENST00000490800 RNF185Q96GF1 192 aa5.4□□□□□ -1.54
CLDN1-202ENST00000490800 TMEM208Q9BTX3 173 aa5.4□□□□□ -1.54
CLDN1-202ENST00000490800 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
CLDN1-202ENST00000490800 TMEM191AQ9H0A3 160 aa5.4□□□□□ -1.54
CLDN1-202ENST00000490800 GSN-AS1Q9NRJ2 163 aa5.4□□□□□ -1.54
CLDN1-202ENST00000490800 EVI2AP22794 236 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms