RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 TPPP3Q9BW30 176 aa9.95□□□□□ -0.82
SRGAP3-208ENST00000490348 CIDEAO60543 219 aa9.94□□□□□ -0.82
SRGAP3-208ENST00000490348 GYPEP15421 78 aa9.94□□□□□ -0.82
SRGAP3-208ENST00000490348 SSTP61278 116 aa9.94□□□□□ -0.82
SRGAP3-208ENST00000490348 RNF212Q495C1 297 aa9.94□□□□□ -0.82
SRGAP3-208ENST00000490348 UQCC3Q6UW78 93 aa9.94□□□□□ -0.82
SRGAP3-208ENST00000490348 GTSF1Q8WW33 167 aa9.94□□□□□ -0.82
SRGAP3-208ENST00000490348 Q9UF83 564 aa9.94□□□□□ -0.82
SRGAP3-208ENST00000490348 ICOSQ9Y6W8 199 aa9.94□□□□□ -0.82
SRGAP3-208ENST00000490348 TRBV6-4A0A1B0GX49 114 aa9.93□□□□□ -0.82
SRGAP3-208ENST00000490348 ERVFC1-1P60608 527 aa9.93□□□□□ -0.82
SRGAP3-208ENST00000490348 RPL23P62829 140 aaKnown RBP9.93□□□□□ -0.82
SRGAP3-208ENST00000490348 TMEM241Q24JQ0 296 aa9.93□□□□□ -0.82
SRGAP3-208ENST00000490348 FAM74A4Q5TZK3 123 aa9.93□□□□□ -0.82
SRGAP3-208ENST00000490348 SPANXN1Q5VSR9 72 aa9.93□□□□□ -0.82
SRGAP3-208ENST00000490348 LYZL1Q6UWQ5 148 aa9.93□□□□□ -0.82
SRGAP3-208ENST00000490348 MSRB1Q9NZV6 116 aa9.93□□□□□ -0.82
SRGAP3-208ENST00000490348 XKRY2A2RUG3 117 aa9.92□□□□□ -0.82
SRGAP3-208ENST00000490348 CTRLP40313 264 aa9.92□□□□□ -0.82
SRGAP3-208ENST00000490348 SOHLH1Q5JUK2 328 aa9.92□□□□□ -0.82
SRGAP3-208ENST00000490348 UBE2DNLQ8IWF7 75 aa9.92□□□□□ -0.82
SRGAP3-208ENST00000490348 C14orf178Q8N769 122 aaPredicted RBP9.92□□□□□ -0.82
SRGAP3-208ENST00000490348 ISOC2Q96AB3 205 aa9.92□□□□□ -0.82
SRGAP3-208ENST00000490348 FAT2Q9NYQ8 4349 aa9.92□□□□□ -0.82
SRGAP3-208ENST00000490348 GATCO43716 136 aaKnown RBP9.92□□□□□ -0.82
SRGAP3-208ENST00000490348 MRPL23Q16540 153 aaKnown RBP9.92□□□□□ -0.82
SRGAP3-208ENST00000490348 NAT8Q9UHE5 227 aa9.92□□□□□ -0.82
SRGAP3-208ENST00000490348 KIF25-AS1Q9Y6Z4 181 aa9.92□□□□□ -0.82
SRGAP3-208ENST00000490348 A0A1W2PPQ1 181 aa9.91□□□□□ -0.82
SRGAP3-208ENST00000490348 RHODO00212 210 aa9.91□□□□□ -0.82
SRGAP3-208ENST00000490348 CCL18P55774 89 aa9.91□□□□□ -0.82
SRGAP3-208ENST00000490348 RHOHQ15669 191 aa9.91□□□□□ -0.82
SRGAP3-208ENST00000490348 CT83Q5H943 113 aa9.91□□□□□ -0.82
SRGAP3-208ENST00000490348 ZNRF2Q8NHG8 242 aa9.91□□□□□ -0.82
SRGAP3-208ENST00000490348 CNFNQ9BYD5 112 aa9.91□□□□□ -0.82
SRGAP3-208ENST00000490348 OSTCQ9NRP0 149 aa9.91□□□□□ -0.82
SRGAP3-208ENST00000490348 F2Z2F3 143 aa9.9□□□□□ -0.82
SRGAP3-208ENST00000490348 SRIP30626 198 aa9.9□□□□□ -0.82
SRGAP3-208ENST00000490348 LINC00315P59091 139 aa9.9□□□□□ -0.82
SRGAP3-208ENST00000490348 ADIRFQ15847 76 aa9.9□□□□□ -0.82
SRGAP3-208ENST00000490348 V9GYV3 84 aa9.9□□□□□ -0.82
SRGAP3-208ENST00000490348 EPPK1P58107 5090 aaKnown RBP9.9□□□□□ -0.83
SRGAP3-208ENST00000490348 LOC105371267A0A1B0GV96 52 aa9.89□□□□□ -0.83
SRGAP3-208ENST00000490348 LINC00694P0DN24 101 aa9.89□□□□□ -0.83
SRGAP3-208ENST00000490348 FAM3BP58499 235 aaPredicted RBP9.89□□□□□ -0.83
SRGAP3-208ENST00000490348 LYPD5Q6UWN5 251 aa9.89□□□□□ -0.83
SRGAP3-208ENST00000490348 NEGR1Q7Z3B1 354 aa9.89□□□□□ -0.83
SRGAP3-208ENST00000490348 PRADC1Q9BSG0 188 aa9.89□□□□□ -0.83
SRGAP3-208ENST00000490348 IGLV2-18A0A075B6J9 118 aa9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 A8MWL6 223 aa9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 SCO1O75880 301 aa9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 NTF3P20783 257 aa9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 FOXA3P55318 350 aaPredicted RBP9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 CACNG7P62955 275 aa9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 AP1S3Q96PC3 154 aa9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 UPK3BQ9BT76 320 aa9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 MRPS16Q9Y3D3 137 aaKnown RBP9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 HECTD4Q9Y4D8 3996 aa9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 DNAH17Q9UFH2 4485 aa9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 EVI2AP22794 236 aa9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 WDR73Q6P4I2 378 aa9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 TSKUQ8WUA8 353 aa9.88□□□□□ -0.83
SRGAP3-208ENST00000490348 PGLYRP4Q96LB8 373 aa9.87□□□□□ -0.83
SRGAP3-208ENST00000490348 GAGE12JA6NER3 117 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 HIGD1CA8MV81 97 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 M0R2N4 97 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 ADCYAP1P18509 176 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 RAB4BP61018 213 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 GAGE1Q13065 139 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 GAGE4Q13068 117 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 GAGE5Q13069 117 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 ZNF56Q15929 161 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 GAGE13Q4V321 117 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 Q6ZR54 194 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 C15orf54Q8N8G6 183 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 OR10G8Q8NGN5 311 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 GFRA4Q9GZZ7 299 aa9.86□□□□□ -0.83
SRGAP3-208ENST00000490348 TWIST1Q15672 202 aa9.85□□□□□ -0.83
SRGAP3-208ENST00000490348 Q9H8V8 135 aa9.85□□□□□ -0.83
SRGAP3-208ENST00000490348 FAM231BA6NCW3 169 aa9.84□□□□□ -0.83
SRGAP3-208ENST00000490348 SH2D6Q7Z4S9 175 aa9.84□□□□□ -0.83
SRGAP3-208ENST00000490348 KRTAP1-5Q9BYS1 174 aa9.84□□□□□ -0.83
SRGAP3-208ENST00000490348 APOC3P02656 99 aa9.84□□□□□ -0.83
SRGAP3-208ENST00000490348 SMIM17P0DL12 118 aa9.84□□□□□ -0.83
SRGAP3-208ENST00000490348 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.84□□□□□ -0.83
SRGAP3-208ENST00000490348 NUP35Q8NFH5 326 aa9.84□□□□□ -0.83
SRGAP3-208ENST00000490348 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
SRGAP3-208ENST00000490348 TRBV10-1A0A0K0K1A3 114 aa9.83□□□□□ -0.84
SRGAP3-208ENST00000490348 SMIM27A0A1W2PRY6 76 aa9.83□□□□□ -0.84
SRGAP3-208ENST00000490348 TMEM218A2RU14 115 aa9.83□□□□□ -0.84
SRGAP3-208ENST00000490348 F5H697 171 aa9.83□□□□□ -0.84
SRGAP3-208ENST00000490348 MGPP08493 103 aa9.83□□□□□ -0.84
SRGAP3-208ENST00000490348 TRGC1P0CF51 173 aa9.83□□□□□ -0.84
SRGAP3-208ENST00000490348 TIRAPP58753 221 aa9.83□□□□□ -0.84
SRGAP3-208ENST00000490348 SUMO4Q6EEV6 95 aa9.83□□□□□ -0.84
SRGAP3-208ENST00000490348 SVBPQ8N300 66 aa9.83□□□□□ -0.84
SRGAP3-208ENST00000490348 NEXN-AS1Q8NBZ9 246 aa9.83□□□□□ -0.84
SRGAP3-208ENST00000490348 PKHD1P08F94 4074 aa9.82□□□□□ -0.84
SRGAP3-208ENST00000490348 NBDYA0A0U1RRE5 68 aa9.82□□□□□ -0.84
SRGAP3-208ENST00000490348 M0QY20 66 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms