RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TIRAPP58753 221 aa11.91□□□□□ -0.5
MDC1-206ENST00000489540 Q6ZSN1 163 aa11.91□□□□□ -0.5
MDC1-206ENST00000489540 OR2D3Q8NGH3 330 aa11.91□□□□□ -0.5
MDC1-206ENST00000489540 CRYGDP07320 174 aa11.9□□□□□ -0.5
MDC1-206ENST00000489540 TOR2AQ5JU69 321 aa11.9□□□□□ -0.5
MDC1-206ENST00000489540 SPANXN1Q5VSR9 72 aa11.9□□□□□ -0.5
MDC1-206ENST00000489540 OR10AG1Q8NH19 301 aa11.9□□□□□ -0.5
MDC1-206ENST00000489540 A0A087WWL8 130 aa11.89□□□□□ -0.51
MDC1-206ENST00000489540 FAM74A4Q5TZK3 123 aa11.89□□□□□ -0.51
MDC1-206ENST00000489540 OCC1Q8TAD7 63 aa11.89□□□□□ -0.51
MDC1-206ENST00000489540 DNAH2Q9P225 4427 aa11.88□□□□□ -0.51
MDC1-206ENST00000489540 BTF3P20290 206 aaKnown RBP11.88□□□□□ -0.51
MDC1-206ENST00000489540 C6orf223Q8N319 242 aa11.88□□□□□ -0.51
MDC1-206ENST00000489540 PRSS29PA6NIE9 313 aa11.87□□□□□ -0.51
MDC1-206ENST00000489540 FER1L6-AS1Q8NA97 138 aa11.87□□□□□ -0.51
MDC1-206ENST00000489540 NUDT10Q8NFP7 164 aa11.87□□□□□ -0.51
MDC1-206ENST00000489540 ATP6V0E2Q8NHE4 81 aa11.87□□□□□ -0.51
MDC1-206ENST00000489540 NUDT11Q96G61 164 aa11.87□□□□□ -0.51
MDC1-206ENST00000489540 TRAV9-2A0A087WT02 112 aa11.86□□□□□ -0.51
MDC1-206ENST00000489540 F2Z2F3 143 aa11.86□□□□□ -0.51
MDC1-206ENST00000489540 CEBPGP53567 150 aa11.86□□□□□ -0.51
MDC1-206ENST00000489540 C14orf178Q8N769 122 aaPredicted RBP11.86□□□□□ -0.51
MDC1-206ENST00000489540 MUC21A0A0G2JKD1 596 aa11.86□□□□□ -0.51
MDC1-206ENST00000489540 MUC21A0A140T8X8 626 aa11.86□□□□□ -0.51
MDC1-206ENST00000489540 K7EN84 100 aa11.86□□□□□ -0.51
MDC1-206ENST00000489540 IGLC6P0CF74 106 aa11.86□□□□□ -0.51
MDC1-206ENST00000489540 GZMBP10144 247 aa11.86□□□□□ -0.51
MDC1-206ENST00000489540 CACNG7P62955 275 aa11.86□□□□□ -0.51
MDC1-206ENST00000489540 TPPP3Q9BW30 176 aa11.86□□□□□ -0.51
MDC1-206ENST00000489540 GTSF1LQ9H1H1 148 aa11.86□□□□□ -0.51
MDC1-206ENST00000489540 LY96Q9Y6Y9 160 aa11.86□□□□□ -0.51
MDC1-206ENST00000489540 GAGE12JA6NER3 117 aa11.85□□□□□ -0.51
MDC1-206ENST00000489540 K7EP13 123 aa11.85□□□□□ -0.51
MDC1-206ENST00000489540 RAB4BP61018 213 aa11.85□□□□□ -0.51
MDC1-206ENST00000489540 GAGE1Q13065 139 aa11.85□□□□□ -0.51
MDC1-206ENST00000489540 GAGE4Q13068 117 aa11.85□□□□□ -0.51
MDC1-206ENST00000489540 GAGE5Q13069 117 aa11.85□□□□□ -0.51
MDC1-206ENST00000489540 GAGE13Q4V321 117 aa11.85□□□□□ -0.51
MDC1-206ENST00000489540 KRTAP1-5Q9BYS1 174 aa11.85□□□□□ -0.51
MDC1-206ENST00000489540 BIRC6Q9NR09 4857 aa11.85□□□□□ -0.51
MDC1-206ENST00000489540 TRAV8-6A0A0B4J262 113 aa11.84□□□□□ -0.51
MDC1-206ENST00000489540 TRBV10-1A0A0K0K1A3 114 aa11.84□□□□□ -0.51
MDC1-206ENST00000489540 SRP19P09132 144 aaKnown RBP11.84□□□□□ -0.51
MDC1-206ENST00000489540 SSTP61278 116 aa11.84□□□□□ -0.51
MDC1-206ENST00000489540 RNASE7Q9H1E1 156 aaKnown RBP11.84□□□□□ -0.51
MDC1-206ENST00000489540 RPP21Q9H633 154 aaKnown RBP11.84□□□□□ -0.51
MDC1-206ENST00000489540 DNAH10OSP0CZ25 163 aa11.83□□□□□ -0.52
MDC1-206ENST00000489540 SMIM17P0DL12 118 aa11.83□□□□□ -0.52
MDC1-206ENST00000489540 LINC00694P0DN24 101 aa11.83□□□□□ -0.52
MDC1-206ENST00000489540 EVI2AP22794 236 aa11.83□□□□□ -0.52
MDC1-206ENST00000489540 LELP1Q5T871 98 aa11.83□□□□□ -0.52
MDC1-206ENST00000489540 WFDC10BQ8IUB3 73 aa11.83□□□□□ -0.52
MDC1-206ENST00000489540 AP1S3Q96PC3 154 aa11.83□□□□□ -0.52
MDC1-206ENST00000489540 SMIM7Q9BQ49 75 aa11.83□□□□□ -0.52
MDC1-206ENST00000489540 FRAS1Q86XX4 4008 aa11.83□□□□□ -0.52
MDC1-206ENST00000489540 DNAH17Q9UFH2 4485 aa11.82□□□□□ -0.52
MDC1-206ENST00000489540 ZNF727A8MUV8 499 aa11.82□□□□□ -0.52
MDC1-206ENST00000489540 WDR73Q6P4I2 378 aa11.82□□□□□ -0.52
MDC1-206ENST00000489540 FAM231DQ6ZW35 169 aa11.82□□□□□ -0.52
MDC1-206ENST00000489540 COMMD7Q86VX2 200 aa11.82□□□□□ -0.52
MDC1-206ENST00000489540 Q9UF83 564 aa11.82□□□□□ -0.52
MDC1-206ENST00000489540 IGHV3-38A0A0C4DH36 116 aa11.81□□□□□ -0.52
MDC1-206ENST00000489540 RPL36AP83881 106 aaKnown RBP11.81□□□□□ -0.52
MDC1-206ENST00000489540 PEA15Q15121 130 aa11.81□□□□□ -0.52
MDC1-206ENST00000489540 ZNF56Q15929 161 aa11.81□□□□□ -0.52
MDC1-206ENST00000489540 OR10J3Q5JRS4 329 aa11.81□□□□□ -0.52
MDC1-206ENST00000489540 LYZL1Q6UWQ5 148 aa11.81□□□□□ -0.52
MDC1-206ENST00000489540 RPL36ALQ969Q0 106 aaKnown RBP11.81□□□□□ -0.52
MDC1-206ENST00000489540 SMDT1Q9H4I9 107 aa11.81□□□□□ -0.52
MDC1-206ENST00000489540 FAT2Q9NYQ8 4349 aa11.81□□□□□ -0.52
MDC1-206ENST00000489540 A0A087WWC5 75 aa11.8□□□□□ -0.52
MDC1-206ENST00000489540 A0A1B0GVY2 172 aa11.8□□□□□ -0.52
MDC1-206ENST00000489540 F5H697 171 aa11.8□□□□□ -0.52
MDC1-206ENST00000489540 GATCO43716 136 aaKnown RBP11.8□□□□□ -0.52
MDC1-206ENST00000489540 FAM74A3Q4VXF1 159 aa11.8□□□□□ -0.52
MDC1-206ENST00000489540 C10orf126Q8N4M7 172 aa11.8□□□□□ -0.52
MDC1-206ENST00000489540 KIF25-AS1Q9Y6Z4 181 aa11.8□□□□□ -0.52
MDC1-206ENST00000489540 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
MDC1-206ENST00000489540 ERVFC1-1P60608 527 aa11.79□□□□□ -0.52
MDC1-206ENST00000489540 LINC01551Q86U37 167 aa11.79□□□□□ -0.52
MDC1-206ENST00000489540 OR10G8Q8NGN5 311 aa11.79□□□□□ -0.52
MDC1-206ENST00000489540 MSRB1Q9NZV6 116 aa11.79□□□□□ -0.52
MDC1-206ENST00000489540 A8MWL6 223 aa11.78□□□□□ -0.52
MDC1-206ENST00000489540 TRGC1P0CF51 173 aa11.78□□□□□ -0.52
MDC1-206ENST00000489540 NTF3P20783 257 aa11.78□□□□□ -0.52
MDC1-206ENST00000489540 CTRLP40313 264 aa11.78□□□□□ -0.52
MDC1-206ENST00000489540 LINC00315P59091 139 aa11.78□□□□□ -0.52
MDC1-206ENST00000489540 LINC01556Q5JQF7 62 aa11.78□□□□□ -0.52
MDC1-206ENST00000489540 TNP2Q05952 138 aa11.77□□□□□ -0.52
MDC1-206ENST00000489540 TMEM241Q24JQ0 296 aa11.77□□□□□ -0.52
MDC1-206ENST00000489540 CT83Q5H943 113 aa11.77□□□□□ -0.52
MDC1-206ENST00000489540 NFE4Q86UQ8 179 aa11.77□□□□□ -0.52
MDC1-206ENST00000489540 CNFNQ9BYD5 112 aa11.77□□□□□ -0.52
MDC1-206ENST00000489540 UBE2D3P61077 147 aa11.77□□□□□ -0.53
MDC1-206ENST00000489540 UBE2D2P62837 147 aa11.77□□□□□ -0.53
MDC1-206ENST00000489540 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.77□□□□□ -0.53
MDC1-206ENST00000489540 C9JQL5 133 aa11.76□□□□□ -0.53
MDC1-206ENST00000489540 FOXA3P55318 350 aaPredicted RBP11.76□□□□□ -0.53
MDC1-206ENST00000489540 TWIST1Q15672 202 aa11.76□□□□□ -0.53
MDC1-206ENST00000489540 NEXN-AS1Q8NBZ9 246 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms