RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 C10orf126Q8N4M7 172 aa9.43□□□□□ -0.9
VTI1A-206ENST00000489142 SYT8Q8NBV8 401 aa9.43□□□□□ -0.9
VTI1A-206ENST00000489142 EIF5AP63241 154 aaKnown RBP9.42□□□□□ -0.9
VTI1A-206ENST00000489142 PIK3CD-AS1Q5SR53 167 aa9.42□□□□□ -0.9
VTI1A-206ENST00000489142 PRR27Q6MZM9 219 aa9.42□□□□□ -0.9
VTI1A-206ENST00000489142 SCRT2Q9NQ03 307 aa9.42□□□□□ -0.9
VTI1A-206ENST00000489142 GNG13Q9P2W3 67 aa9.42□□□□□ -0.9
VTI1A-206ENST00000489142 APOBP04114 4563 aaKnown RBP9.41□□□□□ -0.9
VTI1A-206ENST00000489142 MUC21A0A0G2JKD1 596 aa9.41□□□□□ -0.9
VTI1A-206ENST00000489142 MUC21A0A140T8X8 626 aa9.41□□□□□ -0.9
VTI1A-206ENST00000489142 K7EP13 123 aa9.41□□□□□ -0.9
VTI1A-206ENST00000489142 BAGE2Q86Y30 109 aa9.41□□□□□ -0.9
VTI1A-206ENST00000489142 SFRP2Q96HF1 295 aa9.41□□□□□ -0.9
VTI1A-206ENST00000489142 DERL1Q9BUN8 251 aa9.41□□□□□ -0.9
VTI1A-206ENST00000489142 ABCA13Q86UQ4 5058 aa9.41□□□□□ -0.9
VTI1A-206ENST00000489142 IBA57-AS1B1ANH7 110 aa9.4□□□□□ -0.9
VTI1A-206ENST00000489142 PSCAO43653 123 aa9.4□□□□□ -0.9
VTI1A-206ENST00000489142 SSTP61278 116 aa9.4□□□□□ -0.9
VTI1A-206ENST00000489142 ZFP82Q8N141 532 aa9.4□□□□□ -0.9
VTI1A-206ENST00000489142 OR10AG1Q8NH19 301 aa9.4□□□□□ -0.9
VTI1A-206ENST00000489142 RHODO00212 210 aa9.39□□□□□ -0.91
VTI1A-206ENST00000489142 S100A9P06702 114 aaKnown RBP9.39□□□□□ -0.91
VTI1A-206ENST00000489142 RPL35P42766 123 aaKnown RBP9.39□□□□□ -0.91
VTI1A-206ENST00000489142 MLST8Q9BVC4 326 aa9.39□□□□□ -0.91
VTI1A-206ENST00000489142 PGPEP1Q9NXJ5 209 aa9.39□□□□□ -0.91
VTI1A-206ENST00000489142 KRTAP10-1P60331 282 aa9.38□□□□□ -0.91
VTI1A-206ENST00000489142 MANBALQ9NQG1 85 aa9.38□□□□□ -0.91
VTI1A-206ENST00000489142 hCG_2014768A0A024R1R8 64 aa9.37□□□□□ -0.91
VTI1A-206ENST00000489142 LRCOL1A6NCL2 159 aa9.37□□□□□ -0.91
VTI1A-206ENST00000489142 CDPF1Q6NVV7 123 aa9.37□□□□□ -0.91
VTI1A-206ENST00000489142 DAZ4Q86SG3 579 aaKnown RBP9.37□□□□□ -0.91
VTI1A-206ENST00000489142 TCTE3Q8IZS6 198 aa9.37□□□□□ -0.91
VTI1A-206ENST00000489142 DAZ3Q9NR90 486 aaKnown RBP9.37□□□□□ -0.91
VTI1A-206ENST00000489142 RAB19A4D1S5 217 aa9.36□□□□□ -0.91
VTI1A-206ENST00000489142 CENPWQ5EE01 88 aa9.36□□□□□ -0.91
VTI1A-206ENST00000489142 Q8N1X5 172 aa9.36□□□□□ -0.91
VTI1A-206ENST00000489142 TRAV1-1A0A0B4J248 108 aa9.35□□□□□ -0.91
VTI1A-206ENST00000489142 GZMBP10144 247 aa9.35□□□□□ -0.91
VTI1A-206ENST00000489142 SULT1A2P50226 295 aa9.35□□□□□ -0.91
VTI1A-206ENST00000489142 ZNF56Q15929 161 aa9.35□□□□□ -0.91
VTI1A-206ENST00000489142 C11orf52Q96A22 123 aa9.35□□□□□ -0.91
VTI1A-206ENST00000489142 DNAJC30Q96LL9 226 aa9.35□□□□□ -0.91
VTI1A-206ENST00000489142 RBFOX3A6NFN3 312 aa9.34□□□□□ -0.91
VTI1A-206ENST00000489142 LECT2O14960 151 aa9.34□□□□□ -0.91
VTI1A-206ENST00000489142 SNAI2O43623 268 aa9.34□□□□□ -0.91
VTI1A-206ENST00000489142 IGLV2-8P01709 118 aa9.34□□□□□ -0.91
VTI1A-206ENST00000489142 C1QBP02746 253 aa9.34□□□□□ -0.91
VTI1A-206ENST00000489142 RAB5CP51148 216 aa9.34□□□□□ -0.91
VTI1A-206ENST00000489142 HAMPP81172 84 aa9.34□□□□□ -0.91
VTI1A-206ENST00000489142 WFDC2Q14508 124 aa9.34□□□□□ -0.91
VTI1A-206ENST00000489142 SPANXN1Q5VSR9 72 aa9.34□□□□□ -0.91
VTI1A-206ENST00000489142 EIF5AL1Q6IS14 154 aaKnown RBP9.34□□□□□ -0.91
VTI1A-206ENST00000489142 TPPP3Q9BW30 176 aa9.34□□□□□ -0.91
VTI1A-206ENST00000489142 A0A087WWC5 75 aa9.33□□□□□ -0.92
VTI1A-206ENST00000489142 IGLV5-52A0A0A0MRZ9 124 aa9.33□□□□□ -0.92
VTI1A-206ENST00000489142 CXCL1P09341 107 aa9.33□□□□□ -0.92
VTI1A-206ENST00000489142 XGP55808 180 aa9.33□□□□□ -0.92
VTI1A-206ENST00000489142 UBE2D3P61077 147 aa9.33□□□□□ -0.92
VTI1A-206ENST00000489142 UBE2D2P62837 147 aa9.33□□□□□ -0.92
VTI1A-206ENST00000489142 RPL36AP83881 106 aaKnown RBP9.33□□□□□ -0.92
VTI1A-206ENST00000489142 LAGE3Q14657 143 aa9.33□□□□□ -0.92
VTI1A-206ENST00000489142 Q6ZNX1 250 aa9.33□□□□□ -0.92
VTI1A-206ENST00000489142 RPL36ALQ969Q0 106 aaKnown RBP9.33□□□□□ -0.92
VTI1A-206ENST00000489142 BOLA1Q9Y3E2 137 aa9.33□□□□□ -0.92
VTI1A-206ENST00000489142 TRBV7-3A0A075B6L6 115 aa9.32□□□□□ -0.92
VTI1A-206ENST00000489142 F5H697 171 aa9.32□□□□□ -0.92
VTI1A-206ENST00000489142 TEX46H3BTG2 121 aa9.32□□□□□ -0.92
VTI1A-206ENST00000489142 OR5AL1P0C617 328 aa9.32□□□□□ -0.92
VTI1A-206ENST00000489142 GCSHP23434 173 aa9.32□□□□□ -0.92
VTI1A-206ENST00000489142 RAB4BP61018 213 aa9.32□□□□□ -0.92
VTI1A-206ENST00000489142 MEF2BQ02080 365 aaPredicted RBP9.32□□□□□ -0.92
VTI1A-206ENST00000489142 SLC51BQ86UW2 128 aa9.32□□□□□ -0.92
VTI1A-206ENST00000489142 NIT1Q86X76 327 aa9.32□□□□□ -0.92
VTI1A-206ENST00000489142 Q8N814 137 aa9.32□□□□□ -0.92
VTI1A-206ENST00000489142 NEXN-AS1Q8NBZ9 246 aa9.32□□□□□ -0.92
VTI1A-206ENST00000489142 SSBP4Q9BWG4 385 aaPredicted RBP9.32□□□□□ -0.92
VTI1A-206ENST00000489142 URGCP-MRPS24S4R325 110 aa9.32□□□□□ -0.92
VTI1A-206ENST00000489142 TRBV10-1A0A0K0K1A3 114 aa9.31□□□□□ -0.92
VTI1A-206ENST00000489142 BCL2P10415 239 aa9.31□□□□□ -0.92
VTI1A-206ENST00000489142 GNG4P50150 75 aa9.31□□□□□ -0.92
VTI1A-206ENST00000489142 AKAP14Q86UN6 197 aa9.31□□□□□ -0.92
VTI1A-206ENST00000489142 OR2D3Q8NGH3 330 aa9.31□□□□□ -0.92
VTI1A-206ENST00000489142 MED9Q9NWA0 146 aa9.31□□□□□ -0.92
VTI1A-206ENST00000489142 KLK12Q9UKR0 248 aa9.31□□□□□ -0.92
VTI1A-206ENST00000489142 TRBV20OR9-2A0A075B6H5 130 aa9.3□□□□□ -0.92
VTI1A-206ENST00000489142 IFNA1P01562 189 aa9.3□□□□□ -0.92
VTI1A-206ENST00000489142 MGPP08493 103 aa9.3□□□□□ -0.92
VTI1A-206ENST00000489142 C9orf62Q8N4C0 152 aa9.3□□□□□ -0.92
VTI1A-206ENST00000489142 DAZAP1Q96EP5 407 aaKnown RBP9.3□□□□□ -0.92
VTI1A-206ENST00000489142 TM2D2Q9BX73 214 aa9.3□□□□□ -0.92
VTI1A-206ENST00000489142 TRAV8-3A0A0A6YYJ7 113 aa9.29□□□□□ -0.92
VTI1A-206ENST00000489142 C19orf71A6NCJ1 209 aa9.29□□□□□ -0.92
VTI1A-206ENST00000489142 PDE6DO43924 150 aa9.29□□□□□ -0.92
VTI1A-206ENST00000489142 IGLC6P0CF74 106 aa9.29□□□□□ -0.92
VTI1A-206ENST00000489142 FER1L6-AS1Q8NA97 138 aa9.29□□□□□ -0.92
VTI1A-206ENST00000489142 OR10G8Q8NGN5 311 aa9.29□□□□□ -0.92
VTI1A-206ENST00000489142 BAALCQ8WXS3 180 aa9.29□□□□□ -0.92
VTI1A-206ENST00000489142 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-206ENST00000489142 IGKV2D-24A0A075B6R9 120 aa9.28□□□□□ -0.92
VTI1A-206ENST00000489142 A0A087WX48 190 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 1681.3 ms