RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 RHODO00212 210 aa15.43■□□□□ 0.06
COL9A3-213ENST00000489045 PHLDA3Q9Y5J5 127 aa15.43■□□□□ 0.06
COL9A3-213ENST00000489045 TPT1P13693 172 aaKnown RBP15.42■□□□□ 0.06
COL9A3-213ENST00000489045 FAM74A4Q5TZK3 123 aa15.42■□□□□ 0.06
COL9A3-213ENST00000489045 SCO2A0A1W2PP80 73 aa15.41■□□□□ 0.06
COL9A3-213ENST00000489045 M0R381 172 aa15.41■□□□□ 0.06
COL9A3-213ENST00000489045 Q8N3U1 123 aa15.41■□□□□ 0.06
COL9A3-213ENST00000489045 A0A087WWL8 130 aa15.4■□□□□ 0.06
COL9A3-213ENST00000489045 PFDN1O60925 122 aa15.4■□□□□ 0.06
COL9A3-213ENST00000489045 SFRP2Q96HF1 295 aa15.4■□□□□ 0.06
COL9A3-213ENST00000489045 LRCOL1A6NCL2 159 aa15.39■□□□□ 0.05
COL9A3-213ENST00000489045 S100A9P06702 114 aaKnown RBP15.39■□□□□ 0.05
COL9A3-213ENST00000489045 H2AFB1P0C5Y9 115 aa15.39■□□□□ 0.05
COL9A3-213ENST00000489045 KRTAP10-1P60331 282 aa15.39■□□□□ 0.05
COL9A3-213ENST00000489045 EIF5AP63241 154 aaKnown RBP15.39■□□□□ 0.05
COL9A3-213ENST00000489045 LAGE3Q14657 143 aa15.38■□□□□ 0.05
COL9A3-213ENST00000489045 ZFP82Q8N141 532 aa15.38■□□□□ 0.05
COL9A3-213ENST00000489045 TMUB2Q71RG4 321 aa15.37■□□□□ 0.05
COL9A3-213ENST00000489045 GCSHP23434 173 aa15.36■□□□□ 0.05
COL9A3-213ENST00000489045 XGP55808 180 aa15.36■□□□□ 0.05
COL9A3-213ENST00000489045 RPL19P84098 196 aaKnown RBP15.36■□□□□ 0.05
COL9A3-213ENST00000489045 BAGE2Q86Y30 109 aa15.36■□□□□ 0.05
COL9A3-213ENST00000489045 MLST8Q9BVC4 326 aa15.36■□□□□ 0.05
COL9A3-213ENST00000489045 A0A087WWC5 75 aa15.35■□□□□ 0.05
COL9A3-213ENST00000489045 IGLV5-52A0A0A0MRZ9 124 aa15.33■□□□□ 0.04
COL9A3-213ENST00000489045 PRR27Q6MZM9 219 aa15.33■□□□□ 0.04
COL9A3-213ENST00000489045 DAZ4Q86SG3 579 aaKnown RBP15.33■□□□□ 0.04
COL9A3-213ENST00000489045 Q8N814 137 aa15.33■□□□□ 0.04
COL9A3-213ENST00000489045 NTN5Q8WTR8 489 aaPredicted RBP15.33■□□□□ 0.04
COL9A3-213ENST00000489045 DAZ3Q9NR90 486 aaKnown RBP15.33■□□□□ 0.04
COL9A3-213ENST00000489045 CXCL1P09341 107 aa15.32■□□□□ 0.04
COL9A3-213ENST00000489045 OR10AG1Q8NH19 301 aa15.32■□□□□ 0.04
COL9A3-213ENST00000489045 TM2D2Q9BX73 214 aa15.32■□□□□ 0.04
COL9A3-213ENST00000489045 CCL20P78556 96 aa15.31■□□□□ 0.04
COL9A3-213ENST00000489045 MANBALQ9NQG1 85 aa15.31■□□□□ 0.04
COL9A3-213ENST00000489045 GNG13Q9P2W3 67 aa15.31■□□□□ 0.04
COL9A3-213ENST00000489045 TRBV10-1A0A0K0K1A3 114 aa15.3■□□□□ 0.04
COL9A3-213ENST00000489045 EPM2AB3EWF7 344 aa15.3■□□□□ 0.04
COL9A3-213ENST00000489045 RPL35P42766 123 aaKnown RBP15.3■□□□□ 0.04
COL9A3-213ENST00000489045 RPL36AP83881 106 aaKnown RBP15.3■□□□□ 0.04
COL9A3-213ENST00000489045 RPL36ALQ969Q0 106 aaKnown RBP15.3■□□□□ 0.04
COL9A3-213ENST00000489045 TRAV8-3A0A0A6YYJ7 113 aa15.29■□□□□ 0.04
COL9A3-213ENST00000489045 SNAI2O43623 268 aa15.29■□□□□ 0.04
COL9A3-213ENST00000489045 TOR2AQ5JU69 321 aa15.29■□□□□ 0.04
COL9A3-213ENST00000489045 NIT1Q86X76 327 aa15.29■□□□□ 0.04
COL9A3-213ENST00000489045 DERL1Q9BUN8 251 aa15.29■□□□□ 0.04
COL9A3-213ENST00000489045 URGCP-MRPS24S4R325 110 aa15.29■□□□□ 0.04
COL9A3-213ENST00000489045 UBE2D3P61077 147 aa15.28■□□□□ 0.04
COL9A3-213ENST00000489045 UBE2D2P62837 147 aa15.28■□□□□ 0.04
COL9A3-213ENST00000489045 WFDC2Q14508 124 aa15.28■□□□□ 0.04
COL9A3-213ENST00000489045 ZNF56Q15929 161 aa15.28■□□□□ 0.04
COL9A3-213ENST00000489045 C11orf52Q96A22 123 aa15.28■□□□□ 0.04
COL9A3-213ENST00000489045 SSBP4Q9BWG4 385 aaPredicted RBP15.28■□□□□ 0.04
COL9A3-213ENST00000489045 TRBV7-3A0A075B6L6 115 aa15.27■□□□□ 0.04
COL9A3-213ENST00000489045 TRAV1-1A0A0B4J248 108 aa15.27■□□□□ 0.04
COL9A3-213ENST00000489045 MUC21A0A0G2JKD1 596 aa15.27■□□□□ 0.04
COL9A3-213ENST00000489045 MUC21A0A140T8X8 626 aa15.27■□□□□ 0.04
COL9A3-213ENST00000489045 RAB5CP51148 216 aa15.27■□□□□ 0.04
COL9A3-213ENST00000489045 RAB4BP61018 213 aa15.27■□□□□ 0.04
COL9A3-213ENST00000489045 OR5AL1P0C617 328 aa15.26■□□□□ 0.03
COL9A3-213ENST00000489045 SPANXN1Q5VSR9 72 aa15.26■□□□□ 0.03
COL9A3-213ENST00000489045 EIF5AL1Q6IS14 154 aaKnown RBP15.26■□□□□ 0.03
COL9A3-213ENST00000489045 FAT1Q14517 4588 aa15.25■□□□□ 0.03
COL9A3-213ENST00000489045 OR10G8Q8NGN5 311 aa15.25■□□□□ 0.03
COL9A3-213ENST00000489045 TEX46H3BTG2 121 aa15.24■□□□□ 0.03
COL9A3-213ENST00000489045 LECT2O14960 151 aa15.24■□□□□ 0.03
COL9A3-213ENST00000489045 SULT1A2P50226 295 aa15.24■□□□□ 0.03
COL9A3-213ENST00000489045 SSTP61278 116 aa15.24■□□□□ 0.03
COL9A3-213ENST00000489045 HAMPP81172 84 aa15.24■□□□□ 0.03
COL9A3-213ENST00000489045 CENPWQ5EE01 88 aa15.24■□□□□ 0.03
COL9A3-213ENST00000489045 TCTE3Q8IZS6 198 aa15.24■□□□□ 0.03
COL9A3-213ENST00000489045 NEXN-AS1Q8NBZ9 246 aa15.24■□□□□ 0.03
COL9A3-213ENST00000489045 KLK12Q9UKR0 248 aa15.24■□□□□ 0.03
COL9A3-213ENST00000489045 Q5VSD8 79 aa15.23■□□□□ 0.03
COL9A3-213ENST00000489045 DNAJC30Q96LL9 226 aa15.23■□□□□ 0.03
COL9A3-213ENST00000489045 TMEM70Q9BUB7 260 aa15.23■□□□□ 0.03
COL9A3-213ENST00000489045 A0A087WX48 190 aa15.22■□□□□ 0.03
COL9A3-213ENST00000489045 FRZBQ92765 325 aa15.22■□□□□ 0.03
COL9A3-213ENST00000489045 RMI2Q96E14 147 aa15.22■□□□□ 0.03
COL9A3-213ENST00000489045 CHCHD7Q9BUK0 85 aa15.22■□□□□ 0.03
COL9A3-213ENST00000489045 COX11Q9Y6N1 276 aa15.22■□□□□ 0.03
COL9A3-213ENST00000489045 IGLV2-8P01709 118 aa15.21■□□□□ 0.03
COL9A3-213ENST00000489045 SMR3BP02814 79 aaPredicted RBP15.21■□□□□ 0.03
COL9A3-213ENST00000489045 KCNIP4Q6PIL6 250 aa15.21■□□□□ 0.03
COL9A3-213ENST00000489045 IGKV2D-24A0A075B6R9 120 aa15.2■□□□□ 0.02
COL9A3-213ENST00000489045 TRBV6-8A0A0A6YYG3 113 aa15.2■□□□□ 0.02
COL9A3-213ENST00000489045 F5H697 171 aa15.2■□□□□ 0.02
COL9A3-213ENST00000489045 GZMBP10144 247 aa15.2■□□□□ 0.02
COL9A3-213ENST00000489045 MEF2BQ02080 365 aaPredicted RBP15.2■□□□□ 0.02
COL9A3-213ENST00000489045 BAALCQ8WXS3 180 aa15.2■□□□□ 0.02
COL9A3-213ENST00000489045 UBE2WQ96B02 151 aa15.2■□□□□ 0.02
COL9A3-213ENST00000489045 AP1S3Q96PC3 154 aa15.2■□□□□ 0.02
COL9A3-213ENST00000489045 RAB19A4D1S5 217 aa15.19■□□□□ 0.02
COL9A3-213ENST00000489045 GNG4P50150 75 aa15.19■□□□□ 0.02
COL9A3-213ENST00000489045 ELOBQ15370 118 aa15.19■□□□□ 0.02
COL9A3-213ENST00000489045 TPPP3Q9BW30 176 aa15.19■□□□□ 0.02
COL9A3-213ENST00000489045 KIF25-AS1Q9Y6Z4 181 aa15.19■□□□□ 0.02
COL9A3-213ENST00000489045 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.18■□□□□ 0.02
COL9A3-213ENST00000489045 RBFOX3A6NFN3 312 aa15.18■□□□□ 0.02
COL9A3-213ENST00000489045 PDE6DO43924 150 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms