RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 RPP21Q9H633 154 aaKnown RBP6.14□□□□□ -1.43
SMKR1-202ENST00000488846 K7EQD1 137 aa6.13□□□□□ -1.43
SMKR1-202ENST00000488846 RHODO00212 210 aa6.13□□□□□ -1.43
SMKR1-202ENST00000488846 CTRLP40313 264 aa6.13□□□□□ -1.43
SMKR1-202ENST00000488846 CEBPGP53567 150 aa6.13□□□□□ -1.43
SMKR1-202ENST00000488846 RPL23P62829 140 aaKnown RBP6.13□□□□□ -1.43
SMKR1-202ENST00000488846 MRPL23Q16540 153 aaKnown RBP6.13□□□□□ -1.43
SMKR1-202ENST00000488846 Q6ZSN1 163 aa6.13□□□□□ -1.43
SMKR1-202ENST00000488846 UPK3BQ9BT76 320 aa6.13□□□□□ -1.43
SMKR1-202ENST00000488846 OSTCQ9NRP0 149 aa6.13□□□□□ -1.43
SMKR1-202ENST00000488846 NAT8Q9UHE5 227 aa6.13□□□□□ -1.43
SMKR1-202ENST00000488846 ICOSQ9Y6W8 199 aa6.13□□□□□ -1.43
SMKR1-202ENST00000488846 DNAH10Q8IVF4 4471 aa6.13□□□□□ -1.43
SMKR1-202ENST00000488846 FAM231BA6NCW3 169 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 M0R381 172 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 LINC00694P0DN24 101 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 CCL18P55774 89 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 LINC00315P59091 139 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 CACNG7P62955 275 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 RHOHQ15669 191 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 ESRGQ1W209 222 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 SOHLH1Q5JUK2 328 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 ZNRF2Q8NHG8 242 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 GTSF1Q8WW33 167 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 ISOC2Q96AB3 205 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 LINC00588Q9Y4M8 146 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 KIF25-AS1Q9Y6Z4 181 aa6.12□□□□□ -1.43
SMKR1-202ENST00000488846 A8MWL6 223 aa6.11□□□□□ -1.43
SMKR1-202ENST00000488846 GATCO43716 136 aaKnown RBP6.11□□□□□ -1.43
SMKR1-202ENST00000488846 GYPEP15421 78 aa6.11□□□□□ -1.43
SMKR1-202ENST00000488846 TIRAPP58753 221 aa6.11□□□□□ -1.43
SMKR1-202ENST00000488846 ERVFC1-1P60608 527 aa6.11□□□□□ -1.43
SMKR1-202ENST00000488846 SPANXN1Q5VSR9 72 aa6.11□□□□□ -1.43
SMKR1-202ENST00000488846 LYZL1Q6UWQ5 148 aa6.11□□□□□ -1.43
SMKR1-202ENST00000488846 NEGR1Q7Z3B1 354 aa6.11□□□□□ -1.43
SMKR1-202ENST00000488846 SH2D6Q7Z4S9 175 aa6.11□□□□□ -1.43
SMKR1-202ENST00000488846 PRADC1Q9BSG0 188 aa6.11□□□□□ -1.43
SMKR1-202ENST00000488846 GFRA4Q9GZZ7 299 aa6.11□□□□□ -1.43
SMKR1-202ENST00000488846 MRPS16Q9Y3D3 137 aaKnown RBP6.11□□□□□ -1.43
SMKR1-202ENST00000488846 V9GYV3 84 aa6.11□□□□□ -1.43
SMKR1-202ENST00000488846 FAT2Q9NYQ8 4349 aa6.11□□□□□ -1.43
SMKR1-202ENST00000488846 FRAS1Q86XX4 4008 aa6.1□□□□□ -1.43
SMKR1-202ENST00000488846 A0A087WWL8 130 aa6.1□□□□□ -1.43
SMKR1-202ENST00000488846 IGHV3-73A0A0B4J1V6 119 aa6.1□□□□□ -1.43
SMKR1-202ENST00000488846 LOC100131303A0A0U1RQF7 123 aa6.1□□□□□ -1.43
SMKR1-202ENST00000488846 SRIP30626 198 aa6.1□□□□□ -1.43
SMKR1-202ENST00000488846 RAB4BP61018 213 aa6.1□□□□□ -1.43
SMKR1-202ENST00000488846 UQCC3Q6UW78 93 aa6.1□□□□□ -1.43
SMKR1-202ENST00000488846 LYPD5Q6UWN5 251 aa6.1□□□□□ -1.43
SMKR1-202ENST00000488846 TSKUQ8WUA8 353 aa6.1□□□□□ -1.43
SMKR1-202ENST00000488846 AP1S3Q96PC3 154 aa6.1□□□□□ -1.43
SMKR1-202ENST00000488846 MSRB1Q9NZV6 116 aa6.1□□□□□ -1.43
SMKR1-202ENST00000488846 MUC21A0A0G2JKD1 596 aa6.09□□□□□ -1.43
SMKR1-202ENST00000488846 TRBV10-1A0A0K0K1A3 114 aa6.09□□□□□ -1.43
SMKR1-202ENST00000488846 MUC21A0A140T8X8 626 aa6.09□□□□□ -1.43
SMKR1-202ENST00000488846 LINC00862A6NCI5 91 aa6.09□□□□□ -1.43
SMKR1-202ENST00000488846 NTF3P20783 257 aa6.09□□□□□ -1.43
SMKR1-202ENST00000488846 FAM74A4Q5TZK3 123 aa6.09□□□□□ -1.43
SMKR1-202ENST00000488846 Q6ZR54 194 aa6.09□□□□□ -1.43
SMKR1-202ENST00000488846 UBE2DNLQ8IWF7 75 aa6.09□□□□□ -1.43
SMKR1-202ENST00000488846 C14orf178Q8N769 122 aaPredicted RBP6.09□□□□□ -1.43
SMKR1-202ENST00000488846 C15orf54Q8N8G6 183 aa6.09□□□□□ -1.43
SMKR1-202ENST00000488846 OR10G8Q8NGN5 311 aa6.09□□□□□ -1.43
SMKR1-202ENST00000488846 Q9UF83 564 aa6.09□□□□□ -1.43
SMKR1-202ENST00000488846 DNAH17Q9UFH2 4485 aa6.09□□□□□ -1.44
SMKR1-202ENST00000488846 A6NJY4 79 aa6.08□□□□□ -1.44
SMKR1-202ENST00000488846 TRGC1P0CF51 173 aa6.08□□□□□ -1.44
SMKR1-202ENST00000488846 PNRC1Q12796 327 aaPredicted RBP6.08□□□□□ -1.44
SMKR1-202ENST00000488846 ADIRFQ15847 76 aa6.08□□□□□ -1.44
SMKR1-202ENST00000488846 TPPP3Q9BW30 176 aa6.08□□□□□ -1.44
SMKR1-202ENST00000488846 Q9H8V8 135 aa6.08□□□□□ -1.44
SMKR1-202ENST00000488846 SMIM27A0A1W2PRY6 76 aa6.07□□□□□ -1.44
SMKR1-202ENST00000488846 HIGD1CA8MV81 97 aa6.07□□□□□ -1.44
SMKR1-202ENST00000488846 EVI2AP22794 236 aa6.07□□□□□ -1.44
SMKR1-202ENST00000488846 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
SMKR1-202ENST00000488846 LCE2CQ5TA81 110 aa6.07□□□□□ -1.44
SMKR1-202ENST00000488846 DPH3P1Q9H4G8 78 aa6.07□□□□□ -1.44
SMKR1-202ENST00000488846 TRBV7-3A0A075B6L6 115 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 NBDYA0A0U1RRE5 68 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 A0A1B0GUT8 65 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 TMEM218A2RU14 115 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 M0QY20 66 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 SMIM17P0DL12 118 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 ADCYAP1P18509 176 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 SSTP61278 116 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 TWIST1Q15672 202 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 NEXN-AS1Q8NBZ9 246 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 NUP35Q8NFH5 326 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 ATP6V0E2Q8NHE4 81 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 PGLYRP4Q96LB8 373 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 GTSF1LQ9H1H1 148 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 NAT8BQ9UHF3 227 aa6.06□□□□□ -1.44
SMKR1-202ENST00000488846 GAGE12JA6NER3 117 aa6.05□□□□□ -1.44
SMKR1-202ENST00000488846 SIVA1O15304 175 aa6.05□□□□□ -1.44
SMKR1-202ENST00000488846 BTF3P20290 206 aaKnown RBP6.05□□□□□ -1.44
SMKR1-202ENST00000488846 UBE2D3P61077 147 aa6.05□□□□□ -1.44
SMKR1-202ENST00000488846 UBE2D2P62837 147 aa6.05□□□□□ -1.44
SMKR1-202ENST00000488846 RPL36AP83881 106 aaKnown RBP6.05□□□□□ -1.44
SMKR1-202ENST00000488846 GAGE1Q13065 139 aa6.05□□□□□ -1.44
SMKR1-202ENST00000488846 GAGE4Q13068 117 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms