RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 H3BVH4 76 aa4.16□□□□□ -1.74
PTCH1-211ENST00000488809 ARL14EPLP0DKL9 152 aa4.16□□□□□ -1.74
PTCH1-211ENST00000488809 TPT1P13693 172 aaKnown RBP4.16□□□□□ -1.74
PTCH1-211ENST00000488809 CDC34P49427 236 aaPredicted RBP4.16□□□□□ -1.74
PTCH1-211ENST00000488809 UBE2D3P61077 147 aa4.16□□□□□ -1.74
PTCH1-211ENST00000488809 UBE2D2P62837 147 aa4.16□□□□□ -1.74
PTCH1-211ENST00000488809 CIRBPQ14011 172 aaKnown RBP4.16□□□□□ -1.74
PTCH1-211ENST00000488809 MPV17L2Q567V2 206 aa4.16□□□□□ -1.74
PTCH1-211ENST00000488809 SDIM1Q6ZPB5 146 aa4.16□□□□□ -1.74
PTCH1-211ENST00000488809 LINC01600Q96MT4 127 aa4.16□□□□□ -1.74
PTCH1-211ENST00000488809 SDHCQ99643 169 aaPredicted RBP4.16□□□□□ -1.74
PTCH1-211ENST00000488809 CHCHD5Q9BSY4 110 aa4.16□□□□□ -1.74
PTCH1-211ENST00000488809 JPT2Q9H910 190 aa4.16□□□□□ -1.74
PTCH1-211ENST00000488809 PHLDA3Q9Y5J5 127 aa4.16□□□□□ -1.74
PTCH1-211ENST00000488809 A0A087WWL8 130 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 IGKV3D-20A0A0C4DH25 116 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 hDV102S1A0JD36 115 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 PLA2G10O15496 165 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 PTTG1O95997 202 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 ARMS2P0C7Q2 107 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 CNBPP62633 177 aaKnown RBP4.15□□□□□ -1.75
PTCH1-211ENST00000488809 DNLZQ5SXM8 178 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 MZT2BQ6NZ67 158 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 REG3GQ6UW15 175 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 ZFP82Q8N141 532 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 OR10G8Q8NGN5 311 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 SFRP2Q96HF1 295 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 TMEM167BQ9NRX6 74 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 Q9UF83 564 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 HSPB11Q9Y547 144 aa4.15□□□□□ -1.75
PTCH1-211ENST00000488809 A0A087WYN8 130 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 PANO1I0J062 215 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 M0R381 172 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 PHOX2AO14813 284 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 HMGB3O15347 200 aaKnown RBP4.14□□□□□ -1.75
PTCH1-211ENST00000488809 EIF3GO75821 320 aaKnown RBP eCLIP4.14□□□□□ -1.75
PTCH1-211ENST00000488809 STAG3L2P0CL84 134 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 STAG3L3P0CL85 134 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 GZMBP10144 247 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 RPL12P30050 165 aaKnown RBP4.14□□□□□ -1.75
PTCH1-211ENST00000488809 RAB4BP61018 213 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 RAB2AP61019 212 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 SUMO1P63165 101 aaKnown RBP4.14□□□□□ -1.75
PTCH1-211ENST00000488809 ZNF56Q15929 161 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 WDR73Q6P4I2 378 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 SMIM3Q9BZL3 60 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 PRR34Q9NV39 138 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 EPDR1Q9UM22 224 aa4.14□□□□□ -1.75
PTCH1-211ENST00000488809 TRBV25-1A0A075B6N4 114 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 TRAV8-4A0A0B4J246 113 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 A0A0J9YXV3 536 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 H0YIZ8 118 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 GAS8-AS1O95177 125 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 SIX6O95475 246 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 CXorf1O96002 111 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 IFNA7P01567 189 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 P01737 135 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 MBP02144 154 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 GCHFRP30047 84 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 CLPSL2Q6UWE3 100 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 LINC00269Q8N2A0 174 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 SUN5Q8TC36 379 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 SPACA4Q8TDM5 124 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 PPP1R1CQ8WVI7 109 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 CCDC32Q9BV29 185 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 PKIGQ9Y2B9 76 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 KIF25-AS1Q9Y6Z4 181 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 ARL2-SNX15V9GYD0 113 aa4.13□□□□□ -1.75
PTCH1-211ENST00000488809 A0A1W2PRE2 83 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 A6NHS1 94 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 KRBOX1C9JBD0 128 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 M0R036 132 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 MPC2O95563 127 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 RBX1P62877 108 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 REG3AQ06141 175 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 FAM162BQ5T6X4 162 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 SPINK6Q6UWN8 80 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 NEXN-AS1Q8NBZ9 246 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 ENKURQ8TC29 256 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 GTSF1Q8WW33 167 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 NKX6-2Q9C056 277 aaPredicted RBP4.12□□□□□ -1.75
PTCH1-211ENST00000488809 PLAC8Q9NZF1 115 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 ZFP30Q9Y2G7 519 aa4.12□□□□□ -1.75
PTCH1-211ENST00000488809 IGLV10-54A0A075B6I4 117 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 TRAV34A0A0B4J273 112 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 IGHV1-24A0A0C4DH33 117 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 GRIFINA4D1Z8 144 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 PEX7O00628 323 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 CHTF8P0CG12 524 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 SMIM17P0DL12 118 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 UBE2G1P62253 170 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 PRR3P79522 188 aaKnown RBP4.11□□□□□ -1.75
PTCH1-211ENST00000488809 SERF2P84101 59 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 GAGE6Q13070 117 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 ODF1Q14990 250 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 CFAP161Q6P656 301 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 Q86TA4 180 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 RAB24Q969Q5 203 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 HIST1H2BAQ96A08 127 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 PSMG3Q9BT73 122 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms