RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 LY96Q9Y6Y9 160 aa10.37□□□□□ -0.75
CXCL12-207ENST00000488591 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
CXCL12-207ENST00000488591 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
CXCL12-207ENST00000488591 ZNF727A8MUV8 499 aa10.36□□□□□ -0.75
CXCL12-207ENST00000488591 F2Z2F3 143 aa10.36□□□□□ -0.75
CXCL12-207ENST00000488591 NXPH4O95158 308 aa10.36□□□□□ -0.75
CXCL12-207ENST00000488591 CRYGDP07320 174 aa10.36□□□□□ -0.75
CXCL12-207ENST00000488591 SRP19P09132 144 aaKnown RBP10.36□□□□□ -0.75
CXCL12-207ENST00000488591 GZMBP10144 247 aa10.36□□□□□ -0.75
CXCL12-207ENST00000488591 SSTP61278 116 aa10.36□□□□□ -0.75
CXCL12-207ENST00000488591 PEA15Q15121 130 aa10.36□□□□□ -0.75
CXCL12-207ENST00000488591 C1orf134Q5TEV5 83 aa10.36□□□□□ -0.75
CXCL12-207ENST00000488591 Q6ZSN1 163 aa10.36□□□□□ -0.75
CXCL12-207ENST00000488591 LINC00336Q6ZUF6 198 aa10.36□□□□□ -0.75
CXCL12-207ENST00000488591 A0A1W2PPQ1 181 aa10.35□□□□□ -0.75
CXCL12-207ENST00000488591 K7EN84 100 aa10.35□□□□□ -0.75
CXCL12-207ENST00000488591 SIVA1O15304 175 aa10.35□□□□□ -0.75
CXCL12-207ENST00000488591 IGLC6P0CF74 106 aa10.35□□□□□ -0.75
CXCL12-207ENST00000488591 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
CXCL12-207ENST00000488591 CACNG7P62955 275 aa10.35□□□□□ -0.75
CXCL12-207ENST00000488591 RNASE7Q9H1E1 156 aaKnown RBP10.35□□□□□ -0.75
CXCL12-207ENST00000488591 RPP21Q9H633 154 aaKnown RBP10.35□□□□□ -0.75
CXCL12-207ENST00000488591 DNAH6Q9C0G6 4158 aa10.35□□□□□ -0.75
CXCL12-207ENST00000488591 TIRAPP58753 221 aa10.34□□□□□ -0.75
CXCL12-207ENST00000488591 RAB14P61106 215 aa10.34□□□□□ -0.75
CXCL12-207ENST00000488591 FAM74A3Q4VXF1 159 aa10.34□□□□□ -0.75
CXCL12-207ENST00000488591 ATP6V0E2Q8NHE4 81 aa10.34□□□□□ -0.75
CXCL12-207ENST00000488591 SMDT1Q9H4I9 107 aa10.34□□□□□ -0.75
CXCL12-207ENST00000488591 GAGE12JA6NER3 117 aa10.33□□□□□ -0.76
CXCL12-207ENST00000488591 GATCO43716 136 aaKnown RBP10.33□□□□□ -0.76
CXCL12-207ENST00000488591 ERVFC1-1P60608 527 aa10.33□□□□□ -0.76
CXCL12-207ENST00000488591 RAB4BP61018 213 aa10.33□□□□□ -0.76
CXCL12-207ENST00000488591 GAGE1Q13065 139 aa10.33□□□□□ -0.76
CXCL12-207ENST00000488591 GAGE4Q13068 117 aa10.33□□□□□ -0.76
CXCL12-207ENST00000488591 GAGE5Q13069 117 aa10.33□□□□□ -0.76
CXCL12-207ENST00000488591 GAGE13Q4V321 117 aa10.33□□□□□ -0.76
CXCL12-207ENST00000488591 FAM231DQ6ZW35 169 aa10.33□□□□□ -0.76
CXCL12-207ENST00000488591 C14orf178Q8N769 122 aaPredicted RBP10.33□□□□□ -0.76
CXCL12-207ENST00000488591 AP1S3Q96PC3 154 aa10.33□□□□□ -0.76
CXCL12-207ENST00000488591 TRAV9-2A0A087WT02 112 aa10.32□□□□□ -0.76
CXCL12-207ENST00000488591 TRAV8-6A0A0B4J262 113 aa10.32□□□□□ -0.76
CXCL12-207ENST00000488591 F5H697 171 aa10.32□□□□□ -0.76
CXCL12-207ENST00000488591 ZNF56Q15929 161 aa10.32□□□□□ -0.76
CXCL12-207ENST00000488591 LYZL1Q6UWQ5 148 aa10.32□□□□□ -0.76
CXCL12-207ENST00000488591 C6orf223Q8N319 242 aa10.32□□□□□ -0.76
CXCL12-207ENST00000488591 GTSF1LQ9H1H1 148 aa10.32□□□□□ -0.76
CXCL12-207ENST00000488591 TRBV10-1A0A0K0K1A3 114 aa10.31□□□□□ -0.76
CXCL12-207ENST00000488591 A8MWL6 223 aa10.31□□□□□ -0.76
CXCL12-207ENST00000488591 TMEM241Q24JQ0 296 aa10.31□□□□□ -0.76
CXCL12-207ENST00000488591 WDR73Q6P4I2 378 aa10.31□□□□□ -0.76
CXCL12-207ENST00000488591 LINC01551Q86U37 167 aa10.31□□□□□ -0.76
CXCL12-207ENST00000488591 K7EP13 123 aa10.3□□□□□ -0.76
CXCL12-207ENST00000488591 RTL8CO15255 209 aa10.3□□□□□ -0.76
CXCL12-207ENST00000488591 TRGC1P0CF51 173 aa10.3□□□□□ -0.76
CXCL12-207ENST00000488591 BTF3P20290 206 aaKnown RBP10.3□□□□□ -0.76
CXCL12-207ENST00000488591 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
CXCL12-207ENST00000488591 OR10J3Q5JRS4 329 aa10.3□□□□□ -0.76
CXCL12-207ENST00000488591 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
CXCL12-207ENST00000488591 PRSS29PA6NIE9 313 aa10.29□□□□□ -0.76
CXCL12-207ENST00000488591 NTF3P20783 257 aa10.29□□□□□ -0.76
CXCL12-207ENST00000488591 EVI2AP22794 236 aa10.29□□□□□ -0.76
CXCL12-207ENST00000488591 CTRLP40313 264 aa10.29□□□□□ -0.76
CXCL12-207ENST00000488591 CT83Q5H943 113 aa10.29□□□□□ -0.76
CXCL12-207ENST00000488591 LELP1Q5T871 98 aa10.29□□□□□ -0.76
CXCL12-207ENST00000488591 WFDC10BQ8IUB3 73 aa10.29□□□□□ -0.76
CXCL12-207ENST00000488591 C15orf54Q8N8G6 183 aa10.29□□□□□ -0.76
CXCL12-207ENST00000488591 TRBV7-3A0A075B6L6 115 aa10.28□□□□□ -0.76
CXCL12-207ENST00000488591 A0A087WWC5 75 aa10.28□□□□□ -0.76
CXCL12-207ENST00000488591 C9JQL5 133 aa10.28□□□□□ -0.76
CXCL12-207ENST00000488591 LINC00694P0DN24 101 aa10.28□□□□□ -0.76
CXCL12-207ENST00000488591 SRSF3P84103 164 aaKnown RBP10.28□□□□□ -0.76
CXCL12-207ENST00000488591 TWIST1Q15672 202 aa10.28□□□□□ -0.76
CXCL12-207ENST00000488591 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.28□□□□□ -0.76
CXCL12-207ENST00000488591 OSTCQ9NRP0 149 aa10.28□□□□□ -0.76
CXCL12-207ENST00000488591 MSRB1Q9NZV6 116 aa10.28□□□□□ -0.76
CXCL12-207ENST00000488591 Q9UF83 564 aa10.28□□□□□ -0.76
CXCL12-207ENST00000488591 NAT8Q9UHE5 227 aa10.28□□□□□ -0.76
CXCL12-207ENST00000488591 KIF25-AS1Q9Y6Z4 181 aa10.28□□□□□ -0.76
CXCL12-207ENST00000488591 IGHV3-38A0A0C4DH36 116 aa10.27□□□□□ -0.77
CXCL12-207ENST00000488591 MGPP08493 103 aa10.27□□□□□ -0.77
CXCL12-207ENST00000488591 DNAH10OSP0CZ25 163 aa10.27□□□□□ -0.77
CXCL12-207ENST00000488591 BORCS7Q96B45 105 aa10.27□□□□□ -0.77
CXCL12-207ENST00000488591 KRTAP1-5Q9BYS1 174 aa10.27□□□□□ -0.77
CXCL12-207ENST00000488591 H7C1H1 209 aa10.26□□□□□ -0.77
CXCL12-207ENST00000488591 ADIRFQ15847 76 aa10.26□□□□□ -0.77
CXCL12-207ENST00000488591 SMIM15Q7Z3B0 74 aa10.26□□□□□ -0.77
CXCL12-207ENST00000488591 C10orf126Q8N4M7 172 aa10.26□□□□□ -0.77
CXCL12-207ENST00000488591 OR10G8Q8NGN5 311 aa10.26□□□□□ -0.77
CXCL12-207ENST00000488591 GTSF1Q8WW33 167 aa10.26□□□□□ -0.77
CXCL12-207ENST00000488591 CNFNQ9BYD5 112 aa10.26□□□□□ -0.77
CXCL12-207ENST00000488591 DPH3P1Q9H4G8 78 aa10.26□□□□□ -0.77
CXCL12-207ENST00000488591 UBE2D3P61077 147 aa10.25□□□□□ -0.77
CXCL12-207ENST00000488591 RPL23P62829 140 aaKnown RBP10.25□□□□□ -0.77
CXCL12-207ENST00000488591 UBE2D2P62837 147 aa10.25□□□□□ -0.77
CXCL12-207ENST00000488591 TSKUQ8WUA8 353 aa10.25□□□□□ -0.77
CXCL12-207ENST00000488591 ISOC2Q96AB3 205 aa10.25□□□□□ -0.77
CXCL12-207ENST00000488591 PGLYRP4Q96LB8 373 aa10.25□□□□□ -0.77
CXCL12-207ENST00000488591 GFRA4Q9GZZ7 299 aa10.25□□□□□ -0.77
CXCL12-207ENST00000488591 FAM231BA6NCW3 169 aa10.24□□□□□ -0.77
CXCL12-207ENST00000488591 FOXA3P55318 350 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms