RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 WDR73Q6P4I2 378 aa7.28□□□□□ -1.24
SKA1-204ENST00000488454 LYZL1Q6UWQ5 148 aa7.28□□□□□ -1.24
SKA1-204ENST00000488454 OR10AG1Q8NH19 301 aa7.28□□□□□ -1.24
SKA1-204ENST00000488454 PGLYRP4Q96LB8 373 aa7.28□□□□□ -1.24
SKA1-204ENST00000488454 GFRA4Q9GZZ7 299 aa7.28□□□□□ -1.24
SKA1-204ENST00000488454 V9GYV3 84 aa7.28□□□□□ -1.24
SKA1-204ENST00000488454 IGLL5B9A064 214 aa7.27□□□□□ -1.25
SKA1-204ENST00000488454 RS1O15537 224 aa7.27□□□□□ -1.25
SKA1-204ENST00000488454 SMIM17P0DL12 118 aa7.27□□□□□ -1.25
SKA1-204ENST00000488454 FOXA3P55318 350 aaPredicted RBP7.27□□□□□ -1.25
SKA1-204ENST00000488454 TWIST1Q15672 202 aa7.27□□□□□ -1.25
SKA1-204ENST00000488454 RNF212Q495C1 297 aa7.27□□□□□ -1.25
SKA1-204ENST00000488454 SLC7A5P1Q8MH63 180 aa7.27□□□□□ -1.25
SKA1-204ENST00000488454 GTSF1Q8WW33 167 aa7.27□□□□□ -1.25
SKA1-204ENST00000488454 FAM210BQ96KR6 192 aa7.27□□□□□ -1.25
SKA1-204ENST00000488454 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
SKA1-204ENST00000488454 STAB2Q8WWQ8 2551 aa7.26□□□□□ -1.25
SKA1-204ENST00000488454 HIGD1CA8MV81 97 aa7.26□□□□□ -1.25
SKA1-204ENST00000488454 RHODO00212 210 aa7.26□□□□□ -1.25
SKA1-204ENST00000488454 NTF3P20783 257 aa7.26□□□□□ -1.25
SKA1-204ENST00000488454 C10orf91Q5T1B1 145 aa7.26□□□□□ -1.25
SKA1-204ENST00000488454 CFAP126Q5VTH2 177 aa7.26□□□□□ -1.25
SKA1-204ENST00000488454 SMIM15Q7Z3B0 74 aa7.26□□□□□ -1.25
SKA1-204ENST00000488454 ZNF479Q96JC4 524 aa7.26□□□□□ -1.25
SKA1-204ENST00000488454 NAT8BQ9UHF3 227 aa7.26□□□□□ -1.25
SKA1-204ENST00000488454 HHLA3Q9XRX5 114 aa7.26□□□□□ -1.25
SKA1-204ENST00000488454 CARHSP1Q9Y2V2 147 aaKnown RBP7.26□□□□□ -1.25
SKA1-204ENST00000488454 IGHV4-4A0A075B6R2 117 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 IGHV3-73A0A0B4J1V6 119 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 A0A1B0GUT8 65 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 SMIM27A0A1W2PRY6 76 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 NXPH4O95158 308 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 APOC3P02656 99 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 TRGC1P0CF51 173 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 CTRLP40313 264 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 RIGQ13278 110 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 FAM74A4Q5TZK3 123 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 ZFP2Q6ZN57 461 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 POM121L12Q8N7R1 296 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 AP1S3Q96PC3 154 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 CTDSP1Q9GZU7 261 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 PRO0255Q9UI72 69 aa7.25□□□□□ -1.25
SKA1-204ENST00000488454 TRAV26-1A0A087WT03 109 aa7.24□□□□□ -1.25
SKA1-204ENST00000488454 A0A087WWL8 130 aa7.24□□□□□ -1.25
SKA1-204ENST00000488454 SNAPINO95295 136 aa7.24□□□□□ -1.25
SKA1-204ENST00000488454 HOXA5P20719 270 aa7.24□□□□□ -1.25
SKA1-204ENST00000488454 TCTAP57738 103 aa7.24□□□□□ -1.25
SKA1-204ENST00000488454 FHL2Q14192 279 aa7.24□□□□□ -1.25
SKA1-204ENST00000488454 CASC10Q5T4H9 136 aa7.24□□□□□ -1.25
SKA1-204ENST00000488454 TMEM88Q6PEY1 159 aa7.24□□□□□ -1.25
SKA1-204ENST00000488454 SVBPQ8N300 66 aa7.24□□□□□ -1.25
SKA1-204ENST00000488454 C14orf178Q8N769 122 aaPredicted RBP7.24□□□□□ -1.25
SKA1-204ENST00000488454 CLRN3Q8NCR9 226 aa7.24□□□□□ -1.25
SKA1-204ENST00000488454 NUP35Q8NFH5 326 aa7.24□□□□□ -1.25
SKA1-204ENST00000488454 SAMD10Q9BYL1 202 aa7.24□□□□□ -1.25
SKA1-204ENST00000488454 JPT2Q9H910 190 aa7.24□□□□□ -1.25
SKA1-204ENST00000488454 A0A0J9YY99 117 aa7.23□□□□□ -1.25
SKA1-204ENST00000488454 C7orf77A4D0Y5 90 aa7.23□□□□□ -1.25
SKA1-204ENST00000488454 F5H697 171 aa7.23□□□□□ -1.25
SKA1-204ENST00000488454 CRYGDP07320 174 aa7.23□□□□□ -1.25
SKA1-204ENST00000488454 RHEBQ15382 184 aa7.23□□□□□ -1.25
SKA1-204ENST00000488454 C15orf53Q8NAA6 179 aa7.23□□□□□ -1.25
SKA1-204ENST00000488454 PRADC1Q9BSG0 188 aa7.23□□□□□ -1.25
SKA1-204ENST00000488454 CNFNQ9BYD5 112 aa7.23□□□□□ -1.25
SKA1-204ENST00000488454 RPS10P5Q9NQ39 176 aa7.23□□□□□ -1.25
SKA1-204ENST00000488454 MSRB1Q9NZV6 116 aa7.23□□□□□ -1.25
SKA1-204ENST00000488454 TRBV6-4A0A1B0GX49 114 aa7.22□□□□□ -1.25
SKA1-204ENST00000488454 H3BNG1 76 aa7.22□□□□□ -1.25
SKA1-204ENST00000488454 NUDT3O95989 172 aa7.22□□□□□ -1.25
SKA1-204ENST00000488454 GATA1P15976 413 aaPredicted RBP7.22□□□□□ -1.25
SKA1-204ENST00000488454 S100PP25815 95 aa7.22□□□□□ -1.25
SKA1-204ENST00000488454 CRYBA4P53673 196 aa7.22□□□□□ -1.25
SKA1-204ENST00000488454 RAB4BP61018 213 aa7.22□□□□□ -1.25
SKA1-204ENST00000488454 ZNF56Q15929 161 aa7.22□□□□□ -1.25
SKA1-204ENST00000488454 KCNIP4Q6PIL6 250 aa7.22□□□□□ -1.25
SKA1-204ENST00000488454 IMMP2LQ96T52 175 aa7.22□□□□□ -1.25
SKA1-204ENST00000488454 MUC4Q99102 2169 aa7.21□□□□□ -1.26
SKA1-204ENST00000488454 A0A087WWC5 75 aa7.21□□□□□ -1.26
SKA1-204ENST00000488454 A0A1B0GW15 77 aa7.21□□□□□ -1.26
SKA1-204ENST00000488454 S100A8P05109 93 aa7.21□□□□□ -1.26
SKA1-204ENST00000488454 MGPP08493 103 aa7.21□□□□□ -1.26
SKA1-204ENST00000488454 EVI2AP22794 236 aa7.21□□□□□ -1.26
SKA1-204ENST00000488454 FAM3BP58499 235 aaPredicted RBP7.21□□□□□ -1.26
SKA1-204ENST00000488454 RHOHQ15669 191 aa7.21□□□□□ -1.26
SKA1-204ENST00000488454 UFSP1Q6NVU6 142 aa7.21□□□□□ -1.26
SKA1-204ENST00000488454 SLC25A29Q8N8R3 303 aa7.21□□□□□ -1.26
SKA1-204ENST00000488454 DPH3P1Q9H4G8 78 aa7.21□□□□□ -1.26
SKA1-204ENST00000488454 TMEM242Q9NWH2 141 aa7.21□□□□□ -1.26
SKA1-204ENST00000488454 GYPEP15421 78 aa7.2□□□□□ -1.26
SKA1-204ENST00000488454 CAMPP49913 170 aa7.2□□□□□ -1.26
SKA1-204ENST00000488454 MRPL23Q16540 153 aaKnown RBP7.2□□□□□ -1.26
SKA1-204ENST00000488454 LCE4AQ5TA78 99 aa7.2□□□□□ -1.26
SKA1-204ENST00000488454 VSIG2Q96IQ7 327 aa7.2□□□□□ -1.26
SKA1-204ENST00000488454 BTF3L4Q96K17 158 aa7.2□□□□□ -1.26
SKA1-204ENST00000488454 ICOSQ9Y6W8 199 aa7.2□□□□□ -1.26
SKA1-204ENST00000488454 H7C1H1 209 aa7.19□□□□□ -1.26
SKA1-204ENST00000488454 K7EQD1 137 aa7.19□□□□□ -1.26
SKA1-204ENST00000488454 SRIP30626 198 aa7.19□□□□□ -1.26
SKA1-204ENST00000488454 HBBP68871 147 aa7.19□□□□□ -1.26
SKA1-204ENST00000488454 MRPL54Q6P161 138 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms