RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 TICRRQ7Z2Z1 1910 aa2.64□□□□□ -1.99
VPS8-224ENST00000488255 NUP214P35658 2090 aaPredicted RBP2.64□□□□□ -1.99
VPS8-224ENST00000488255 MYO18AQ92614 2054 aaKnown RBP2.64□□□□□ -1.99
VPS8-224ENST00000488255 KIF13AQ9H1H9 1805 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 KIF1AQ12756 1690 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 LOC107984156A0A0G2JMH3 177 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 TRBV10-2A0A0K0K1G8 114 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 TMEM223A0PJW6 202 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 A6NN06 94 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 H3BPC8 53 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 BAALC-AS2P0C853 105 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 C3orf79P0CE67 100 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 CCL3P10147 92 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 MOBPQ13875 183 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 C16orf47Q6ZP98 133 aaPredicted RBP2.63□□□□□ -1.99
VPS8-224ENST00000488255 ZNF818PQ6ZRF7 136 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 ZNF826PQ6ZT77 177 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 ARL17AQ8IVW1 177 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 NMES1Q9C002 83 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 ANAPC1Q9H1A4 1944 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 KIDINS220Q9ULH0 1771 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 CLTCQ00610 1675 aaKnown RBP2.63□□□□□ -1.99
VPS8-224ENST00000488255 TOPAZ1Q8N9V7 1692 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 DISP1Q96F81 1524 aa2.63□□□□□ -1.99
VPS8-224ENST00000488255 MADDQ8WXG6 1647 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 CC2D2AQ9P2K1 1620 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 TRBV7-3A0A075B6L6 115 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 TRAV23DV6A0A075B6W5 121 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 H3BMM0 161 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 GNRH2O43555 120 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 ERC2-IT1O76042 136 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 IGLV2-23P01705 113 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 PRH1P02810 166 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 HMGN2P05204 90 aaKnown RBP2.62□□□□□ -1.99
VPS8-224ENST00000488255 GCHFRP30047 84 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 C9orf116Q5BN46 136 aaPredicted RBP2.62□□□□□ -1.99
VPS8-224ENST00000488255 C3orf56Q8N813 242 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 TMEM254Q8TBM7 123 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 UBE2WQ96B02 151 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 FAM167A-AS1Q96KT0 104 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 ODF3Q96PU9 254 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 TXNDC17Q9BRA2 123 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 NDUFA12Q9UI09 145 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 PLXNA4Q9HCM2 1894 aa2.62□□□□□ -1.99
VPS8-224ENST00000488255 CEP170BQ9Y4F5 1589 aaPredicted RBP2.61□□□□□ -1.99
VPS8-224ENST00000488255 CABIN1Q9Y6J0 2220 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 TET2Q6N021 2002 aaPredicted RBP2.61□□□□□ -1.99
VPS8-224ENST00000488255 BIVM-ERCC5R4GMW8 1640 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 DSCAML1Q8TD84 2053 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 MYMXA0A1B0GTQ4 84 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 CEBPZOSA8MTT3 80 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 HMGA1P17096 107 aaKnown RBP2.61□□□□□ -1.99
VPS8-224ENST00000488255 PLGLAQ15195 96 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 ATXN8Q156A1 80 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 Q8N976 141 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 ABRACLQ9P1F3 81 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 MON2Q7Z3U7 1717 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 ABCC6O95255 1503 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 THADAQ6YHU6 1953 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 MICAL3Q7RTP6 2002 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 MAST1Q9Y2H9 1570 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 NUP98P52948 1817 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 ATG2BQ96BY7 2078 aa2.61□□□□□ -1.99
VPS8-224ENST00000488255 AHDC1Q5TGY3 1603 aaPredicted RBP2.6□□□□□ -1.99
VPS8-224ENST00000488255 RGPD1P0DJD0 1748 aa2.6□□□□□ -1.99
VPS8-224ENST00000488255 ARHGEF28Q8N1W1 1705 aaKnown RBP2.6□□□□□ -1.99
VPS8-224ENST00000488255 LAMB1P07942 1786 aa2.6□□□□□ -1.99
VPS8-224ENST00000488255 IGKV1D-17A0A075B6S4 117 aa2.6□□□□□ -1.99
VPS8-224ENST00000488255 TRAV7A0A075B6U4 112 aa2.6□□□□□ -1.99
VPS8-224ENST00000488255 IGHV3-15A0A0B4J1V0 119 aa2.6□□□□□ -1.99
VPS8-224ENST00000488255 ZNF815PA8K554 130 aa2.6□□□□□ -1.99
VPS8-224ENST00000488255 H7C2G1 150 aa2.6□□□□□ -1.99
VPS8-224ENST00000488255 IGLV3-25P01717 112 aa2.6□□□□□ -1.99
VPS8-224ENST00000488255 CCL5P13501 91 aa2.6□□□□□ -1.99
VPS8-224ENST00000488255 IFI27P40305 119 aaPredicted RBP2.6□□□□□ -1.99
VPS8-224ENST00000488255 RPL28P46779 137 aaKnown RBP2.6□□□□□ -1.99
VPS8-224ENST00000488255 DSCR4P56555 118 aaPredicted RBP2.6□□□□□ -1.99
VPS8-224ENST00000488255 SUPT4H1P63272 117 aaKnown RBP2.6□□□□□ -1.99
VPS8-224ENST00000488255 SDIM1Q6ZPB5 146 aa2.6□□□□□ -1.99
VPS8-224ENST00000488255 VMO1Q7Z5L0 202 aa2.6□□□□□ -1.99
VPS8-224ENST00000488255 TTTY13Q9BZ97 58 aa2.6□□□□□ -1.99
VPS8-224ENST00000488255 CDC42SE1Q9NRR8 79 aa2.6□□□□□ -1.99
VPS8-224ENST00000488255 PATJQ8NI35 1801 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 DOCK2Q92608 1830 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 TRPM2O94759 1503 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 ASXL1Q8IXJ9 1541 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 IGLV10-54A0A075B6I4 117 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 TRBV25-1A0A075B6N4 114 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 H7BZZ5 65 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 CRPP02741 224 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 EDDM3BP56851 147 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 KISS1Q15726 138 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 Q6ZS52 159 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 LINC01560Q8TB33 94 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 SMIM4Q8WVI0 70 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 C4orf3Q8WVX3 66 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 ICOSQ9Y6W8 199 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 KIAA0556O60303 1618 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 NESP48681 1621 aa2.59□□□□□ -1.99
VPS8-224ENST00000488255 MYO3AQ8NEV4 1616 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms