RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 ISOC2Q96AB3 205 aa11.85□□□□□ -0.51
SHROOM1-205ENST00000488072 BIN3Q9NQY0 253 aa11.85□□□□□ -0.51
SHROOM1-205ENST00000488072 A8MWV9 139 aa11.84□□□□□ -0.51
SHROOM1-205ENST00000488072 NAT8Q9UHE5 227 aa11.84□□□□□ -0.51
SHROOM1-205ENST00000488072 DNAH10Q8IVF4 4471 aa11.83□□□□□ -0.52
SHROOM1-205ENST00000488072 M0R2N4 97 aa11.83□□□□□ -0.52
SHROOM1-205ENST00000488072 PGLYRP4Q96LB8 373 aa11.83□□□□□ -0.52
SHROOM1-205ENST00000488072 ICOSQ9Y6W8 199 aa11.83□□□□□ -0.52
SHROOM1-205ENST00000488072 KIF25-AS1Q9Y6Z4 181 aa11.83□□□□□ -0.52
SHROOM1-205ENST00000488072 V9GYV3 84 aa11.83□□□□□ -0.52
SHROOM1-205ENST00000488072 H3BNG1 76 aa11.82□□□□□ -0.52
SHROOM1-205ENST00000488072 FOXA3P55318 350 aaPredicted RBP11.82□□□□□ -0.52
SHROOM1-205ENST00000488072 LINC00315P59091 139 aa11.82□□□□□ -0.52
SHROOM1-205ENST00000488072 FAM74A3Q4VXF1 159 aa11.82□□□□□ -0.52
SHROOM1-205ENST00000488072 PIK3CD-AS1Q5SR53 167 aa11.82□□□□□ -0.52
SHROOM1-205ENST00000488072 SMDT1Q9H4I9 107 aa11.82□□□□□ -0.52
SHROOM1-205ENST00000488072 OSTCQ9NRP0 149 aa11.82□□□□□ -0.52
SHROOM1-205ENST00000488072 GAGE12JA6NER3 117 aa11.81□□□□□ -0.52
SHROOM1-205ENST00000488072 ADCYAP1P18509 176 aa11.81□□□□□ -0.52
SHROOM1-205ENST00000488072 CTRLP40313 264 aa11.81□□□□□ -0.52
SHROOM1-205ENST00000488072 GAGE1Q13065 139 aa11.81□□□□□ -0.52
SHROOM1-205ENST00000488072 GAGE4Q13068 117 aa11.81□□□□□ -0.52
SHROOM1-205ENST00000488072 GAGE5Q13069 117 aa11.81□□□□□ -0.52
SHROOM1-205ENST00000488072 SLAQ13239 276 aa11.81□□□□□ -0.52
SHROOM1-205ENST00000488072 GAGE13Q4V321 117 aa11.81□□□□□ -0.52
SHROOM1-205ENST00000488072 ZFP2Q6ZN57 461 aa11.81□□□□□ -0.52
SHROOM1-205ENST00000488072 COMMD7Q86VX2 200 aa11.81□□□□□ -0.52
SHROOM1-205ENST00000488072 DNAH2Q9P225 4427 aa11.81□□□□□ -0.52
SHROOM1-205ENST00000488072 NTF3P20783 257 aa11.8□□□□□ -0.52
SHROOM1-205ENST00000488072 LYPD5Q6UWN5 251 aa11.8□□□□□ -0.52
SHROOM1-205ENST00000488072 ZNRF2Q8NHG8 242 aa11.8□□□□□ -0.52
SHROOM1-205ENST00000488072 TRBV6-4A0A1B0GX49 114 aa11.79□□□□□ -0.52
SHROOM1-205ENST00000488072 XKRY2A2RUG3 117 aa11.79□□□□□ -0.52
SHROOM1-205ENST00000488072 EVI2AP22794 236 aa11.79□□□□□ -0.52
SHROOM1-205ENST00000488072 MRPL23Q16540 153 aaKnown RBP11.79□□□□□ -0.52
SHROOM1-205ENST00000488072 OR10G8Q8NGN5 311 aa11.79□□□□□ -0.52
SHROOM1-205ENST00000488072 A0A1W2PPQ1 181 aa11.78□□□□□ -0.52
SHROOM1-205ENST00000488072 SRIP30626 198 aa11.78□□□□□ -0.52
SHROOM1-205ENST00000488072 CCL18P55774 89 aa11.78□□□□□ -0.52
SHROOM1-205ENST00000488072 RHOHQ15669 191 aa11.78□□□□□ -0.52
SHROOM1-205ENST00000488072 ZNF56Q15929 161 aa11.78□□□□□ -0.52
SHROOM1-205ENST00000488072 RNF212Q495C1 297 aa11.78□□□□□ -0.52
SHROOM1-205ENST00000488072 A8MWL6 223 aa11.77□□□□□ -0.53
SHROOM1-205ENST00000488072 MGPP08493 103 aa11.77□□□□□ -0.53
SHROOM1-205ENST00000488072 CACNG7P62955 275 aa11.77□□□□□ -0.53
SHROOM1-205ENST00000488072 TWIST1Q15672 202 aa11.77□□□□□ -0.53
SHROOM1-205ENST00000488072 NEGR1Q7Z3B1 354 aa11.77□□□□□ -0.53
SHROOM1-205ENST00000488072 TSKUQ8WUA8 353 aa11.77□□□□□ -0.53
SHROOM1-205ENST00000488072 PRADC1Q9BSG0 188 aa11.77□□□□□ -0.53
SHROOM1-205ENST00000488072 HIGD1CA8MV81 97 aa11.76□□□□□ -0.53
SHROOM1-205ENST00000488072 F2Z2F3 143 aa11.76□□□□□ -0.53
SHROOM1-205ENST00000488072 F5H697 171 aa11.76□□□□□ -0.53
SHROOM1-205ENST00000488072 RHODO00212 210 aa11.76□□□□□ -0.53
SHROOM1-205ENST00000488072 LINC00694P0DN24 101 aa11.76□□□□□ -0.53
SHROOM1-205ENST00000488072 CT83Q5H943 113 aa11.76□□□□□ -0.53
SHROOM1-205ENST00000488072 TMEM218A2RU14 115 aa11.75□□□□□ -0.53
SHROOM1-205ENST00000488072 LINC00862A6NCI5 91 aa11.75□□□□□ -0.53
SHROOM1-205ENST00000488072 CIDEAO60543 219 aa11.75□□□□□ -0.53
SHROOM1-205ENST00000488072 C15orf54Q8N8G6 183 aa11.75□□□□□ -0.53
SHROOM1-205ENST00000488072 NUP35Q8NFH5 326 aa11.75□□□□□ -0.53
SHROOM1-205ENST00000488072 AP1S3Q96PC3 154 aa11.75□□□□□ -0.53
SHROOM1-205ENST00000488072 CNFNQ9BYD5 112 aa11.75□□□□□ -0.53
SHROOM1-205ENST00000488072 KRTAP1-5Q9BYS1 174 aa11.75□□□□□ -0.53
SHROOM1-205ENST00000488072 MRPS16Q9Y3D3 137 aaKnown RBP11.75□□□□□ -0.53
SHROOM1-205ENST00000488072 SUMO4Q6EEV6 95 aa11.74□□□□□ -0.53
SHROOM1-205ENST00000488072 WFDC10BQ8IUB3 73 aa11.74□□□□□ -0.53
SHROOM1-205ENST00000488072 NEXN-AS1Q8NBZ9 246 aa11.74□□□□□ -0.53
SHROOM1-205ENST00000488072 TRAV26-2A0A0B4J265 109 aa11.73□□□□□ -0.53
SHROOM1-205ENST00000488072 IGHV3-38A0A0C4DH36 116 aa11.73□□□□□ -0.53
SHROOM1-205ENST00000488072 GAS8-AS1O95177 125 aa11.73□□□□□ -0.53
SHROOM1-205ENST00000488072 RAB4BP61018 213 aa11.73□□□□□ -0.53
SHROOM1-205ENST00000488072 DEFB104AQ8WTQ1 72 aa11.73□□□□□ -0.53
SHROOM1-205ENST00000488072 Q9H8V8 135 aa11.73□□□□□ -0.53
SHROOM1-205ENST00000488072 DNAH17Q9UFH2 4485 aa11.72□□□□□ -0.53
SHROOM1-205ENST00000488072 SMIM17P0DL12 118 aa11.72□□□□□ -0.53
SHROOM1-205ENST00000488072 WDR73Q6P4I2 378 aa11.72□□□□□ -0.53
SHROOM1-205ENST00000488072 UQCC3Q6UW78 93 aa11.72□□□□□ -0.53
SHROOM1-205ENST00000488072 Q8N3U1 123 aa11.72□□□□□ -0.53
SHROOM1-205ENST00000488072 ATP6V0E2Q8NHE4 81 aa11.72□□□□□ -0.53
SHROOM1-205ENST00000488072 F8W036 122 aa11.71□□□□□ -0.53
SHROOM1-205ENST00000488072 M0QY20 66 aa11.71□□□□□ -0.53
SHROOM1-205ENST00000488072 Q6ZR54 194 aa11.71□□□□□ -0.53
SHROOM1-205ENST00000488072 GFRA4Q9GZZ7 299 aa11.71□□□□□ -0.53
SHROOM1-205ENST00000488072 SMIM27A0A1W2PRY6 76 aa11.7□□□□□ -0.54
SHROOM1-205ENST00000488072 TRGC1P0CF51 173 aa11.7□□□□□ -0.54
SHROOM1-205ENST00000488072 UPK3BQ9BT76 320 aa11.7□□□□□ -0.54
SHROOM1-205ENST00000488072 DPH3P1Q9H4G8 78 aa11.7□□□□□ -0.54
SHROOM1-205ENST00000488072 NBDYA0A0U1RRE5 68 aa11.69□□□□□ -0.54
SHROOM1-205ENST00000488072 A0A1B0GUT8 65 aa11.69□□□□□ -0.54
SHROOM1-205ENST00000488072 FAM3BP58499 235 aaPredicted RBP11.69□□□□□ -0.54
SHROOM1-205ENST00000488072 UBE2D3P61077 147 aa11.69□□□□□ -0.54
SHROOM1-205ENST00000488072 UBE2D2P62837 147 aa11.69□□□□□ -0.54
SHROOM1-205ENST00000488072 GATD1Q8NB37 220 aa11.69□□□□□ -0.54
SHROOM1-205ENST00000488072 MRPL54Q6P161 138 aaKnown RBP11.68□□□□□ -0.54
SHROOM1-205ENST00000488072 RPL39LQ96EH5 51 aaKnown RBP11.68□□□□□ -0.54
SHROOM1-205ENST00000488072 RNF185Q96GF1 192 aa11.68□□□□□ -0.54
SHROOM1-205ENST00000488072 GTSF1LQ9H1H1 148 aa11.68□□□□□ -0.54
SHROOM1-205ENST00000488072 NAT8BQ9UHF3 227 aa11.68□□□□□ -0.54
SHROOM1-205ENST00000488072 TNFRSF18Q9Y5U5 241 aa11.68□□□□□ -0.54
SHROOM1-205ENST00000488072 FAT2Q9NYQ8 4349 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms