RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 CRYGDP07320 174 aa12.46□□□□□ -0.41
COL1A1-207ENST00000486572 TIRAPP58753 221 aa12.46□□□□□ -0.41
COL1A1-207ENST00000486572 SPANXN1Q5VSR9 72 aa12.46□□□□□ -0.41
COL1A1-207ENST00000486572 C6orf223Q8N319 242 aa12.46□□□□□ -0.41
COL1A1-207ENST00000486572 FRAS1Q86XX4 4008 aa12.46□□□□□ -0.42
COL1A1-207ENST00000486572 MUC21A0A0G2JKD1 596 aa12.45□□□□□ -0.42
COL1A1-207ENST00000486572 MUC21A0A140T8X8 626 aa12.45□□□□□ -0.42
COL1A1-207ENST00000486572 K7EN84 100 aa12.45□□□□□ -0.42
COL1A1-207ENST00000486572 IGLC6P0CF74 106 aa12.45□□□□□ -0.42
COL1A1-207ENST00000486572 GZMBP10144 247 aa12.45□□□□□ -0.42
COL1A1-207ENST00000486572 CEBPGP53567 150 aa12.45□□□□□ -0.42
COL1A1-207ENST00000486572 C14orf178Q8N769 122 aaPredicted RBP12.45□□□□□ -0.42
COL1A1-207ENST00000486572 FER1L6-AS1Q8NA97 138 aa12.45□□□□□ -0.42
COL1A1-207ENST00000486572 OCC1Q8TAD7 63 aa12.45□□□□□ -0.42
COL1A1-207ENST00000486572 WFDC10BQ8IUB3 73 aa12.44□□□□□ -0.42
COL1A1-207ENST00000486572 NUDT10Q8NFP7 164 aa12.44□□□□□ -0.42
COL1A1-207ENST00000486572 NUDT11Q96G61 164 aa12.44□□□□□ -0.42
COL1A1-207ENST00000486572 TPPP3Q9BW30 176 aa12.44□□□□□ -0.42
COL1A1-207ENST00000486572 GAGE12JA6NER3 117 aa12.43□□□□□ -0.42
COL1A1-207ENST00000486572 LINC00694P0DN24 101 aa12.43□□□□□ -0.42
COL1A1-207ENST00000486572 GAGE1Q13065 139 aa12.43□□□□□ -0.42
COL1A1-207ENST00000486572 GAGE4Q13068 117 aa12.43□□□□□ -0.42
COL1A1-207ENST00000486572 GAGE5Q13069 117 aa12.43□□□□□ -0.42
COL1A1-207ENST00000486572 GAGE13Q4V321 117 aa12.43□□□□□ -0.42
COL1A1-207ENST00000486572 ATP6V0E2Q8NHE4 81 aa12.43□□□□□ -0.42
COL1A1-207ENST00000486572 SSTP61278 116 aa12.42□□□□□ -0.42
COL1A1-207ENST00000486572 AP1S3Q96PC3 154 aa12.42□□□□□ -0.42
COL1A1-207ENST00000486572 SMIM7Q9BQ49 75 aa12.42□□□□□ -0.42
COL1A1-207ENST00000486572 RNASE7Q9H1E1 156 aaKnown RBP12.42□□□□□ -0.42
COL1A1-207ENST00000486572 RPP21Q9H633 154 aaKnown RBP12.42□□□□□ -0.42
COL1A1-207ENST00000486572 LY96Q9Y6Y9 160 aa12.42□□□□□ -0.42
COL1A1-207ENST00000486572 SRP19P09132 144 aaKnown RBP12.41□□□□□ -0.42
COL1A1-207ENST00000486572 BTF3P20290 206 aaKnown RBP12.41□□□□□ -0.42
COL1A1-207ENST00000486572 ZNF56Q15929 161 aa12.41□□□□□ -0.42
COL1A1-207ENST00000486572 GTSF1LQ9H1H1 148 aa12.41□□□□□ -0.42
COL1A1-207ENST00000486572 Q9UF83 564 aa12.41□□□□□ -0.42
COL1A1-207ENST00000486572 DNAH2Q9P225 4427 aa12.41□□□□□ -0.42
COL1A1-207ENST00000486572 F2Z2F3 143 aa12.4□□□□□ -0.42
COL1A1-207ENST00000486572 DNAH10OSP0CZ25 163 aa12.4□□□□□ -0.42
COL1A1-207ENST00000486572 RAB4BP61018 213 aa12.4□□□□□ -0.42
COL1A1-207ENST00000486572 CACNG7P62955 275 aa12.4□□□□□ -0.42
COL1A1-207ENST00000486572 TRAV9-2A0A087WT02 112 aa12.39□□□□□ -0.43
COL1A1-207ENST00000486572 TRAV8-6A0A0B4J262 113 aa12.39□□□□□ -0.43
COL1A1-207ENST00000486572 TRBV10-1A0A0K0K1A3 114 aa12.39□□□□□ -0.43
COL1A1-207ENST00000486572 A0A1B0GVY2 172 aa12.39□□□□□ -0.43
COL1A1-207ENST00000486572 ZNF727A8MUV8 499 aa12.39□□□□□ -0.43
COL1A1-207ENST00000486572 K7EP13 123 aa12.39□□□□□ -0.43
COL1A1-207ENST00000486572 SMIM17P0DL12 118 aa12.39□□□□□ -0.43
COL1A1-207ENST00000486572 EVI2AP22794 236 aa12.39□□□□□ -0.43
COL1A1-207ENST00000486572 OR10J3Q5JRS4 329 aa12.39□□□□□ -0.43
COL1A1-207ENST00000486572 LELP1Q5T871 98 aa12.39□□□□□ -0.43
COL1A1-207ENST00000486572 CTRLP40313 264 aa12.38□□□□□ -0.43
COL1A1-207ENST00000486572 LINC00315P59091 139 aa12.38□□□□□ -0.43
COL1A1-207ENST00000486572 LYZL1Q6UWQ5 148 aa12.38□□□□□ -0.43
COL1A1-207ENST00000486572 FAM231DQ6ZW35 169 aa12.38□□□□□ -0.43
COL1A1-207ENST00000486572 KIF25-AS1Q9Y6Z4 181 aa12.38□□□□□ -0.43
COL1A1-207ENST00000486572 BIRC6Q9NR09 4857 aa12.38□□□□□ -0.43
COL1A1-207ENST00000486572 IGHV3-38A0A0C4DH36 116 aa12.37□□□□□ -0.43
COL1A1-207ENST00000486572 RPL36AP83881 106 aaKnown RBP12.37□□□□□ -0.43
COL1A1-207ENST00000486572 LINC01551Q86U37 167 aa12.37□□□□□ -0.43
COL1A1-207ENST00000486572 RPL36ALQ969Q0 106 aaKnown RBP12.37□□□□□ -0.43
COL1A1-207ENST00000486572 MSRB1Q9NZV6 116 aa12.37□□□□□ -0.43
COL1A1-207ENST00000486572 HECTD4Q9Y4D8 3996 aa12.37□□□□□ -0.43
COL1A1-207ENST00000486572 F5H697 171 aa12.36□□□□□ -0.43
COL1A1-207ENST00000486572 GATCO43716 136 aaKnown RBP12.36□□□□□ -0.43
COL1A1-207ENST00000486572 ERVFC1-1P60608 527 aa12.36□□□□□ -0.43
COL1A1-207ENST00000486572 TNP2Q05952 138 aa12.36□□□□□ -0.43
COL1A1-207ENST00000486572 TRBV7-3A0A075B6L6 115 aa12.35□□□□□ -0.43
COL1A1-207ENST00000486572 A0A087WWC5 75 aa12.35□□□□□ -0.43
COL1A1-207ENST00000486572 PEA15Q15121 130 aa12.35□□□□□ -0.43
COL1A1-207ENST00000486572 LINC01556Q5JQF7 62 aa12.35□□□□□ -0.43
COL1A1-207ENST00000486572 WDR73Q6P4I2 378 aa12.35□□□□□ -0.43
COL1A1-207ENST00000486572 C10orf126Q8N4M7 172 aa12.35□□□□□ -0.43
COL1A1-207ENST00000486572 OR10G8Q8NGN5 311 aa12.35□□□□□ -0.43
COL1A1-207ENST00000486572 CNFNQ9BYD5 112 aa12.35□□□□□ -0.43
COL1A1-207ENST00000486572 FAT2Q9NYQ8 4349 aa12.35□□□□□ -0.43
COL1A1-207ENST00000486572 TRGC1P0CF51 173 aa12.34□□□□□ -0.43
COL1A1-207ENST00000486572 NTF3P20783 257 aa12.34□□□□□ -0.43
COL1A1-207ENST00000486572 UBE2D3P61077 147 aa12.34□□□□□ -0.43
COL1A1-207ENST00000486572 UBE2D2P62837 147 aa12.34□□□□□ -0.43
COL1A1-207ENST00000486572 FAM74A3Q4VXF1 159 aa12.34□□□□□ -0.43
COL1A1-207ENST00000486572 CT83Q5H943 113 aa12.34□□□□□ -0.43
COL1A1-207ENST00000486572 SMDT1Q9H4I9 107 aa12.34□□□□□ -0.43
COL1A1-207ENST00000486572 DNAH17Q9UFH2 4485 aa12.33□□□□□ -0.44
COL1A1-207ENST00000486572 A8MWL6 223 aa12.33□□□□□ -0.44
COL1A1-207ENST00000486572 C9JQL5 133 aa12.33□□□□□ -0.44
COL1A1-207ENST00000486572 MGPP08493 103 aa12.33□□□□□ -0.44
COL1A1-207ENST00000486572 SRSF3P84103 164 aaKnown RBP12.33□□□□□ -0.44
COL1A1-207ENST00000486572 NEXN-AS1Q8NBZ9 246 aa12.33□□□□□ -0.44
COL1A1-207ENST00000486572 GTSF1Q8WW33 167 aa12.33□□□□□ -0.44
COL1A1-207ENST00000486572 TMEM241Q24JQ0 296 aa12.32□□□□□ -0.44
COL1A1-207ENST00000486572 Q6ZRN7 208 aaPredicted RBP12.32□□□□□ -0.44
COL1A1-207ENST00000486572 NFE4Q86UQ8 179 aa12.32□□□□□ -0.44
COL1A1-207ENST00000486572 TWIST1Q15672 202 aa12.31□□□□□ -0.44
COL1A1-207ENST00000486572 DPH3P1Q9H4G8 78 aa12.31□□□□□ -0.44
COL1A1-207ENST00000486572 OSTCQ9NRP0 149 aa12.31□□□□□ -0.44
COL1A1-207ENST00000486572 TNFRSF18Q9Y5U5 241 aa12.31□□□□□ -0.44
COL1A1-207ENST00000486572 H7C1H1 209 aa12.3□□□□□ -0.44
COL1A1-207ENST00000486572 IGHV3-30P01768 117 aa12.3□□□□□ -0.44
COL1A1-207ENST00000486572 IGHV3-33P01772 117 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms