RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 NAT8BQ9UHF3 227 aa4.35□□□□□ -1.71
USP41-204ENST00000486536 URGCP-MRPS24S4R325 110 aa4.35□□□□□ -1.71
USP41-204ENST00000486536 TMEM189A5PLL7 270 aa4.34□□□□□ -1.71
USP41-204ENST00000486536 GPX1P07203 203 aa4.34□□□□□ -1.71
USP41-204ENST00000486536 PRB4P10163 310 aaPredicted RBP4.34□□□□□ -1.71
USP41-204ENST00000486536 RAB5AP20339 215 aa4.34□□□□□ -1.71
USP41-204ENST00000486536 CDKN1BP46527 198 aa4.34□□□□□ -1.71
USP41-204ENST00000486536 ZNF80P51504 273 aaPredicted RBP4.34□□□□□ -1.71
USP41-204ENST00000486536 NDUFV3P56181 108 aaKnown RBP4.34□□□□□ -1.71
USP41-204ENST00000486536 DEFB1P60022 68 aa4.34□□□□□ -1.71
USP41-204ENST00000486536 ACTL10Q5JWF8 245 aa4.34□□□□□ -1.71
USP41-204ENST00000486536 GDF5OSQ5U4N7 250 aa4.34□□□□□ -1.71
USP41-204ENST00000486536 RASL11AQ6T310 242 aa4.34□□□□□ -1.71
USP41-204ENST00000486536 AMTNQ6UX39 209 aa4.34□□□□□ -1.71
USP41-204ENST00000486536 ATP5L2Q7Z4Y8 100 aa4.34□□□□□ -1.71
USP41-204ENST00000486536 FAM210BQ96KR6 192 aa4.34□□□□□ -1.71
USP41-204ENST00000486536 ZMAT5Q9UDW3 170 aaKnown RBP4.34□□□□□ -1.71
USP41-204ENST00000486536 TGIF2-C20orf24A0A0A6YYL0 155 aa4.33□□□□□ -1.72
USP41-204ENST00000486536 A0A1B0GW15 77 aa4.33□□□□□ -1.72
USP41-204ENST00000486536 C7orf71A4D174 169 aa4.33□□□□□ -1.72
USP41-204ENST00000486536 KNCNA6PVL3 124 aa4.33□□□□□ -1.72
USP41-204ENST00000486536 HIGD1CA8MV81 97 aa4.33□□□□□ -1.72
USP41-204ENST00000486536 ORM1P02763 201 aa4.33□□□□□ -1.72
USP41-204ENST00000486536 NUTF2P61970 127 aaKnown RBP4.33□□□□□ -1.72
USP41-204ENST00000486536 LINC00242Q5T6M2 205 aa4.33□□□□□ -1.72
USP41-204ENST00000486536 PRR9Q5T870 116 aa4.33□□□□□ -1.72
USP41-204ENST00000486536 GTSCR1Q86UQ5 136 aa4.33□□□□□ -1.72
USP41-204ENST00000486536 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.33□□□□□ -1.72
USP41-204ENST00000486536 NUP35Q8NFH5 326 aa4.33□□□□□ -1.72
USP41-204ENST00000486536 KCNS1Q96KK3 526 aa4.33□□□□□ -1.72
USP41-204ENST00000486536 LITAFQ99732 161 aa4.33□□□□□ -1.72
USP41-204ENST00000486536 C20orf144Q9BQM9 153 aa4.33□□□□□ -1.72
USP41-204ENST00000486536 IGKV3D-20A0A0C4DH25 116 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 TEX48A0A1B0GUV7 120 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 F2Z2F3 143 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 ZNF324O75467 553 aaPredicted RBP4.32□□□□□ -1.72
USP41-204ENST00000486536 CA1P00915 261 aaPredicted RBP4.32□□□□□ -1.72
USP41-204ENST00000486536 MT-ND6P03923 174 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 S100A8P05109 93 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 CD7P09564 240 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 IGLC6P0CF74 106 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 RNASE4P34096 147 aaKnown RBP4.32□□□□□ -1.72
USP41-204ENST00000486536 RPS10P46783 165 aaKnown RBP4.32□□□□□ -1.72
USP41-204ENST00000486536 TDRG1Q3Y452 100 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 DNLZQ5SXM8 178 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 GFI1BQ5VTD9 330 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 MORN3Q6PF18 240 aaPredicted RBP4.32□□□□□ -1.72
USP41-204ENST00000486536 GTSF1Q8WW33 167 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 BORCS7Q96B45 105 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 LINC00467Q9BRT7 94 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 GNB1LQ9BYB4 327 aa4.32□□□□□ -1.72
USP41-204ENST00000486536 TRAV12-3A0A0B4J271 114 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 A0A1B0GUT8 65 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 A0A1B0GXF2 115 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 RBMY1BA6NDE4 496 aaKnown RBP4.31□□□□□ -1.72
USP41-204ENST00000486536 RBMY1EA6NEQ0 496 aaKnown RBP4.31□□□□□ -1.72
USP41-204ENST00000486536 IFITM10A6NMD0 228 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 M0R2Z0 102 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 SNAI2O43623 268 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 IGKV3-20P01619 116 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 HLA-DQA1P01909 254 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 OR5AL1P0C617 328 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 RBMY1DP0C7P1 496 aaKnown RBP4.31□□□□□ -1.72
USP41-204ENST00000486536 IGLL1P15814 213 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 CTRLP40313 264 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 TCL1AP56279 114 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 SPINK13Q1W4C9 94 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 FER1L6-AS1Q8NA97 138 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 CNFNQ9BYD5 112 aa4.31□□□□□ -1.72
USP41-204ENST00000486536 IGLV7-46A0A075B6I9 117 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 TRAV12-2A0A075B6T6 113 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 IGHV1OR15-1A0A075B7D0 117 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 TMSB15BA0A087X1C1 80 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 KRTAP4-8A0A0G2JLE6 195 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 C1orf196B1AJZ1 125 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 CRXO43186 299 aaPredicted RBP4.3□□□□□ -1.72
USP41-204ENST00000486536 INSP01308 110 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 GZMBP10144 247 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 S100A4P26447 101 aaKnown RBP4.3□□□□□ -1.72
USP41-204ENST00000486536 ASIPP42127 132 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 RAB5BP61020 215 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 CACNG7P62955 275 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 HBBP68871 147 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 DEFA6Q01524 100 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 MRPL54Q6P161 138 aaKnown RBP4.3□□□□□ -1.72
USP41-204ENST00000486536 LYZL1Q6UWQ5 148 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 TMEM256Q8N2U0 113 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 GATD1Q8NB37 220 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 PGLYRP4Q96LB8 373 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 SCRT2Q9NQ03 307 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 NAGKQ9UJ70 344 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 TP53TG3Q9ULZ0 132 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 MEGF8Q7Z7M0 2845 aa4.3□□□□□ -1.72
USP41-204ENST00000486536 IGLV4-3A0A075B6K6 122 aa4.29□□□□□ -1.72
USP41-204ENST00000486536 GRIFINA4D1Z8 144 aa4.29□□□□□ -1.72
USP41-204ENST00000486536 SPINK4O60575 86 aa4.29□□□□□ -1.72
USP41-204ENST00000486536 TRGC2P03986 189 aa4.29□□□□□ -1.72
USP41-204ENST00000486536 ARMS2P0C7Q2 107 aa4.29□□□□□ -1.72
USP41-204ENST00000486536 EGFEM1PQ0D2K5 195 aa4.29□□□□□ -1.72
USP41-204ENST00000486536 Q6ZQT7 251 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms