RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 GAGE4Q13068 117 aa12.41□□□□□ -0.42
CLDN11-206ENST00000486429 GAGE5Q13069 117 aa12.41□□□□□ -0.42
CLDN11-206ENST00000486429 GAGE13Q4V321 117 aa12.41□□□□□ -0.42
CLDN11-206ENST00000486429 LELP1Q5T871 98 aa12.41□□□□□ -0.42
CLDN11-206ENST00000486429 SFRP2Q96HF1 295 aa12.41□□□□□ -0.42
CLDN11-206ENST00000486429 DERL1Q9BUN8 251 aa12.41□□□□□ -0.42
CLDN11-206ENST00000486429 GTSF1LQ9H1H1 148 aa12.41□□□□□ -0.42
CLDN11-206ENST00000486429 TNFRSF18Q9Y5U5 241 aa12.41□□□□□ -0.42
CLDN11-206ENST00000486429 A0A087WWL8 130 aa12.4□□□□□ -0.42
CLDN11-206ENST00000486429 LINC00694P0DN24 101 aa12.4□□□□□ -0.42
CLDN11-206ENST00000486429 MEF2BQ02080 365 aaPredicted RBP12.4□□□□□ -0.42
CLDN11-206ENST00000486429 CENPWQ5EE01 88 aa12.4□□□□□ -0.42
CLDN11-206ENST00000486429 LINC01556Q5JQF7 62 aa12.4□□□□□ -0.42
CLDN11-206ENST00000486429 C9orf62Q8N4C0 152 aa12.4□□□□□ -0.42
CLDN11-206ENST00000486429 C14orf178Q8N769 122 aaPredicted RBP12.4□□□□□ -0.42
CLDN11-206ENST00000486429 EREGO14944 169 aa12.38□□□□□ -0.43
CLDN11-206ENST00000486429 PDE6DO43924 150 aa12.38□□□□□ -0.43
CLDN11-206ENST00000486429 BCL2P10415 239 aa12.38□□□□□ -0.43
CLDN11-206ENST00000486429 OR10AG1Q8NH19 301 aa12.38□□□□□ -0.43
CLDN11-206ENST00000486429 KRTAP10-2P60368 255 aa12.37□□□□□ -0.43
CLDN11-206ENST00000486429 SNAI2O43623 268 aa12.36□□□□□ -0.43
CLDN11-206ENST00000486429 NKX2-5P52952 324 aaPredicted RBP12.36□□□□□ -0.43
CLDN11-206ENST00000486429 Q9UF83 564 aa12.36□□□□□ -0.43
CLDN11-206ENST00000486429 VAX2Q9UIW0 290 aa12.36□□□□□ -0.43
CLDN11-206ENST00000486429 IGHV3-30P01768 117 aa12.35□□□□□ -0.43
CLDN11-206ENST00000486429 IGHV3-33P01772 117 aa12.35□□□□□ -0.43
CLDN11-206ENST00000486429 OR5AL1P0C617 328 aa12.35□□□□□ -0.43
CLDN11-206ENST00000486429 IGHV3-30-3P0DP02 117 aa12.35□□□□□ -0.43
CLDN11-206ENST00000486429 IGHV3-30-5P0DP03 117 aa12.35□□□□□ -0.43
CLDN11-206ENST00000486429 GNG4P50150 75 aa12.35□□□□□ -0.43
CLDN11-206ENST00000486429 SPANXN1Q5VSR9 72 aa12.35□□□□□ -0.43
CLDN11-206ENST00000486429 SMIM12Q96EX1 92 aa12.35□□□□□ -0.43
CLDN11-206ENST00000486429 MED9Q9NWA0 146 aa12.35□□□□□ -0.43
CLDN11-206ENST00000486429 RYR1P21817 5038 aa12.35□□□□□ -0.43
CLDN11-206ENST00000486429 A0A087WWC5 75 aa12.34□□□□□ -0.43
CLDN11-206ENST00000486429 RAB19A4D1S5 217 aa12.34□□□□□ -0.43
CLDN11-206ENST00000486429 TAGLN2P37802 199 aaKnown RBP12.34□□□□□ -0.43
CLDN11-206ENST00000486429 DAZAP1Q96EP5 407 aaKnown RBP12.34□□□□□ -0.43
CLDN11-206ENST00000486429 SSBP4Q9BWG4 385 aaPredicted RBP12.34□□□□□ -0.43
CLDN11-206ENST00000486429 LRP1BQ9NZR2 4599 aa12.33□□□□□ -0.43
CLDN11-206ENST00000486429 A0A087WTM6 91 aa12.33□□□□□ -0.44
CLDN11-206ENST00000486429 TRBV10-1A0A0K0K1A3 114 aa12.33□□□□□ -0.44
CLDN11-206ENST00000486429 IBA57-AS1B1ANH7 110 aa12.33□□□□□ -0.44
CLDN11-206ENST00000486429 CDK2AP2O75956 126 aa12.33□□□□□ -0.44
CLDN11-206ENST00000486429 IGLV2-8P01709 118 aa12.33□□□□□ -0.44
CLDN11-206ENST00000486429 ZNF56Q15929 161 aa12.33□□□□□ -0.44
CLDN11-206ENST00000486429 Q9HAA7 133 aa12.33□□□□□ -0.44
CLDN11-206ENST00000486429 MUC21A0A0G2JKD1 596 aa12.32□□□□□ -0.44
CLDN11-206ENST00000486429 MUC21A0A140T8X8 626 aa12.32□□□□□ -0.44
CLDN11-206ENST00000486429 PSCAO43653 123 aa12.32□□□□□ -0.44
CLDN11-206ENST00000486429 RPS20P60866 119 aaKnown RBP12.32□□□□□ -0.44
CLDN11-206ENST00000486429 RPL36AP83881 106 aaKnown RBP12.32□□□□□ -0.44
CLDN11-206ENST00000486429 ALKAL2Q6UX46 152 aa12.32□□□□□ -0.44
CLDN11-206ENST00000486429 OR2D3Q8NGH3 330 aa12.32□□□□□ -0.44
CLDN11-206ENST00000486429 RPL36ALQ969Q0 106 aaKnown RBP12.32□□□□□ -0.44
CLDN11-206ENST00000486429 TRBV20OR9-2A0A075B6H5 130 aa12.31□□□□□ -0.44
CLDN11-206ENST00000486429 RAB4BP61018 213 aa12.31□□□□□ -0.44
CLDN11-206ENST00000486429 LAGE3Q14657 143 aa12.31□□□□□ -0.44
CLDN11-206ENST00000486429 AP1S3Q96PC3 154 aa12.31□□□□□ -0.44
CLDN11-206ENST00000486429 C19orf71A6NCJ1 209 aa12.3□□□□□ -0.44
CLDN11-206ENST00000486429 CDPF1Q6NVV7 123 aa12.3□□□□□ -0.44
CLDN11-206ENST00000486429 TPPP3Q9BW30 176 aa12.3□□□□□ -0.44
CLDN11-206ENST00000486429 BIN3Q9NQY0 253 aa12.3□□□□□ -0.44
CLDN11-206ENST00000486429 PGPEP1Q9NXJ5 209 aa12.3□□□□□ -0.44
CLDN11-206ENST00000486429 TRBV7-3A0A075B6L6 115 aa12.29□□□□□ -0.44
CLDN11-206ENST00000486429 XKRY2A2RUG3 117 aa12.29□□□□□ -0.44
CLDN11-206ENST00000486429 P01737 135 aa12.29□□□□□ -0.44
CLDN11-206ENST00000486429 IGLC6P0CF74 106 aa12.29□□□□□ -0.44
CLDN11-206ENST00000486429 GZMBP10144 247 aa12.29□□□□□ -0.44
CLDN11-206ENST00000486429 UBE2D3P61077 147 aa12.29□□□□□ -0.44
CLDN11-206ENST00000486429 SSTP61278 116 aa12.29□□□□□ -0.44
CLDN11-206ENST00000486429 UBE2D2P62837 147 aa12.29□□□□□ -0.44
CLDN11-206ENST00000486429 BLOC1S1P78537 153 aa12.29□□□□□ -0.44
CLDN11-206ENST00000486429 Q8N3U1 123 aa12.29□□□□□ -0.44
CLDN11-206ENST00000486429 FER1L6-AS1Q8NA97 138 aa12.29□□□□□ -0.44
CLDN11-206ENST00000486429 OR10G8Q8NGN5 311 aa12.29□□□□□ -0.44
CLDN11-206ENST00000486429 PCLOQ9Y6V0 5065 aa12.28□□□□□ -0.44
CLDN11-206ENST00000486429 HSPG2P98160 4391 aa12.28□□□□□ -0.44
CLDN11-206ENST00000486429 SMIM17P0DL12 118 aa12.28□□□□□ -0.44
CLDN11-206ENST00000486429 URGCP-MRPS24S4R325 110 aa12.28□□□□□ -0.44
CLDN11-206ENST00000486429 DNAH5Q8TE73 4624 aa12.27□□□□□ -0.44
CLDN11-206ENST00000486429 RBFOX3A6NFN3 312 aa12.27□□□□□ -0.45
CLDN11-206ENST00000486429 F5H697 171 aa12.27□□□□□ -0.45
CLDN11-206ENST00000486429 FUSP35637 526 aaKnown RBP eCLIP12.27□□□□□ -0.45
CLDN11-206ENST00000486429 TOR2AQ5JU69 321 aa12.27□□□□□ -0.45
CLDN11-206ENST00000486429 CACNG7P62955 275 aa12.26□□□□□ -0.45
CLDN11-206ENST00000486429 DAZ4Q86SG3 579 aaKnown RBP12.26□□□□□ -0.45
CLDN11-206ENST00000486429 NEXN-AS1Q8NBZ9 246 aa12.26□□□□□ -0.45
CLDN11-206ENST00000486429 DAZ3Q9NR90 486 aaKnown RBP12.26□□□□□ -0.45
CLDN11-206ENST00000486429 APOBP04114 4563 aaKnown RBP12.25□□□□□ -0.45
CLDN11-206ENST00000486429 NIT1Q86X76 327 aa12.25□□□□□ -0.45
CLDN11-206ENST00000486429 TM2D2Q9BX73 214 aa12.25□□□□□ -0.45
CLDN11-206ENST00000486429 KIF25-AS1Q9Y6Z4 181 aa12.25□□□□□ -0.45
CLDN11-206ENST00000486429 TRAV8-3A0A0A6YYJ7 113 aa12.24□□□□□ -0.45
CLDN11-206ENST00000486429 LRCOL1A6NCL2 159 aa12.24□□□□□ -0.45
CLDN11-206ENST00000486429 TMEM250H0YL14 139 aa12.24□□□□□ -0.45
CLDN11-206ENST00000486429 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.24□□□□□ -0.45
CLDN11-206ENST00000486429 A0A087WX48 190 aa12.23□□□□□ -0.45
CLDN11-206ENST00000486429 F2Z2F3 143 aa12.23□□□□□ -0.45
CLDN11-206ENST00000486429 MGPP08493 103 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms