RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 SOGA1O94964 1423 aa0.03□□□□□ -2.41
LTN1-206ENST00000486427 SSC5DA1L4H1 1573 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 CELSR1Q9NYQ6 3014 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 TRBV20-1A0A075B6N2 111 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 GVQW2A0A096LPI5 108 aaPredicted RBP0.02□□□□□ -2.41
LTN1-206ENST00000486427 F2Z2F3 143 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 YPEL1O60688 119 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 CCL3L1P16619 93 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 CKS1BP61024 79 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 LINC01545Q5VT33 79 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 MIC13Q5XKP0 118 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 C20orf197Q8N268 126 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 PRR15LQ9BU68 103 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 SPANXCQ9NY87 97 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 NDUFA12Q9UI09 145 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 ARHGEF10O15013 1369 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 MYO7AQ13402 2215 aa0.02□□□□□ -2.41
LTN1-206ENST00000486427 CDK13Q14004 1512 aaKnown RBP0.02□□□□□ -2.41
LTN1-206ENST00000486427 IGSF10Q6WRI0 2623 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 LAMB1P07942 1786 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 DOCK11Q5JSL3 2073 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 KIAA0100Q14667 2235 aaKnown RBP0.01□□□□□ -2.41
LTN1-206ENST00000486427 F8P00451 2351 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 NCOR2Q9Y618 2525 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 TRAV12-3A0A0B4J271 114 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 RBAKDNA6NC62 111 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 MCRIP1C9JLW8 97 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 PITX3O75364 302 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 LINC00694P0DN24 101 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 NCS1P62166 190 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 NDUFA11Q86Y39 141 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 PPP1R1CQ8WVI7 109 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 Q96NJ1 140 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 SMIM3Q9BZL3 60 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 BPESC1Q9GZL8 116 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 GSKIPQ9P0R6 139 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 ERG28Q9UKR5 140 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 OVOS2A0A0J9YW53 1432 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 OVOS2Q6IE36 1432 aa0.01□□□□□ -2.41
LTN1-206ENST00000486427 CCDC179H3BU77 68 aa0□□□□□ -2.41
LTN1-206ENST00000486427 CEP152O94986 1710 aa0□□□□□ -2.41
LTN1-206ENST00000486427 COX4I1P13073 169 aa0□□□□□ -2.41
LTN1-206ENST00000486427 SPCS2Q15005 226 aa0□□□□□ -2.41
LTN1-206ENST00000486427 Q5BKY6 102 aa0□□□□□ -2.41
LTN1-206ENST00000486427 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0□□□□□ -2.41
LTN1-206ENST00000486427 C4orf33Q8N1A6 199 aa0□□□□□ -2.41
LTN1-206ENST00000486427 MMGT1Q8N4V1 131 aa0□□□□□ -2.41
LTN1-206ENST00000486427 SMIM11BQ8TCY0 68 aa0□□□□□ -2.41
LTN1-206ENST00000486427 COX7B2Q8TF08 81 aa0□□□□□ -2.41
LTN1-206ENST00000486427 C10orf82Q8WW14 230 aa0□□□□□ -2.41
LTN1-206ENST00000486427 BATF3Q9NR55 127 aa0□□□□□ -2.41
LTN1-206ENST00000486427 COL7A1Q02388 2944 aa-0□□□□□ -2.41
LTN1-206ENST00000486427 CADP27708 2225 aa-0.01□□□□□ -2.41
LTN1-206ENST00000486427 ADGRB1O14514 1584 aa-0.01□□□□□ -2.41
LTN1-206ENST00000486427 DISP2A7MBM2 1401 aa-0.01□□□□□ -2.41
LTN1-206ENST00000486427 PRG4Q92954 1404 aaPredicted RBP-0.01□□□□□ -2.41
LTN1-206ENST00000486427 UNC79Q9P2D8 2635 aa-0.01□□□□□ -2.41
LTN1-206ENST00000486427 TRBV7-1A0A0A6YYK4 115 aa-0.01□□□□□ -2.41
LTN1-206ENST00000486427 LOC105371267A0A1B0GV96 52 aa-0.01□□□□□ -2.41
LTN1-206ENST00000486427 NMBP08949 121 aa-0.01□□□□□ -2.41
LTN1-206ENST00000486427 TSPAN19P0C672 248 aa-0.01□□□□□ -2.41
LTN1-206ENST00000486427 PIRTP0C851 137 aa-0.01□□□□□ -2.41
LTN1-206ENST00000486427 SSBP1Q04837 148 aaKnown RBP-0.01□□□□□ -2.41
LTN1-206ENST00000486427 CTAGE3PQ8IX95 158 aa-0.01□□□□□ -2.41
LTN1-206ENST00000486427 VSTM2AQ8TAG5 236 aa-0.01□□□□□ -2.41
LTN1-206ENST00000486427 SIPA1L3O60292 1781 aaPredicted RBP-0.01□□□□□ -2.41
LTN1-206ENST00000486427 CHD9Q3L8U1 2897 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 TRGV1A0A0A0MS02 117 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 CLPSL1A2RUU4 121 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 M0R2Z0 102 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 SPINK1P00995 79 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 UBE2G1P62253 170 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 COX6A2Q02221 97 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 C9orf116Q5BN46 136 aaPredicted RBP-0.02□□□□□ -2.41
LTN1-206ENST00000486427 FAM74A4Q5TZK3 123 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 SLC48A1Q6P1K1 146 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 Q6ZUT4 128 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 SPRR2GQ9BYE4 73 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 SAR1AQ9NR31 198 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 TMEM242Q9NWH2 141 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 V9GYV3 84 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 AHCTF1Q8WYP5 2266 aa-0.02□□□□□ -2.41
LTN1-206ENST00000486427 HIVEP3Q5T1R4 2406 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 UBR5O95071 2799 aaPredicted RBP-0.03□□□□□ -2.41
LTN1-206ENST00000486427 SPEF2Q9C093 1822 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 ASXL3Q9C0F0 2248 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 J3QR89 54 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 K7ERU9 68 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 APODP05090 189 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 ACYP2P14621 99 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 UBE2D1P51668 147 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 SPANXN1Q5VSR9 72 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 Q6ZRX8 168 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 TSTD1Q8NFU3 115 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 LZICQ8WZA0 190 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 CACNA1CQ13936 2221 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 GOLGA3Q08378 1498 aa-0.03□□□□□ -2.41
LTN1-206ENST00000486427 FHAD1B1AJZ9 1412 aa-0.04□□□□□ -2.42
LTN1-206ENST00000486427 DMBT1Q9UGM3 2413 aaPredicted RBP-0.04□□□□□ -2.42
LTN1-206ENST00000486427 IBTKQ9P2D0 1353 aaPredicted RBP-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms