RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 PLXNA3P51805 1871 aa8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 PCNX2A6NKB5 2137 aa8.19□□□□□ -1.1
SRGAP3-207ENST00000485983 LINC01545Q5VT33 79 aa8.18□□□□□ -1.1
SRGAP3-207ENST00000485983 POLR3KQ9Y2Y1 108 aaPredicted RBP8.18□□□□□ -1.1
SRGAP3-207ENST00000485983 HILS1P60008 231 aa8.18□□□□□ -1.1
SRGAP3-207ENST00000485983 IGHG2P01859 326 aa8.18□□□□□ -1.1
SRGAP3-207ENST00000485983 Q8N1Y9 231 aa8.18□□□□□ -1.1
SRGAP3-207ENST00000485983 SIVA1O15304 175 aa8.18□□□□□ -1.1
SRGAP3-207ENST00000485983 WIPF3A6NGB9 483 aa8.18□□□□□ -1.1
SRGAP3-207ENST00000485983 C5orf47Q569G3 176 aa8.18□□□□□ -1.1
SRGAP3-207ENST00000485983 RPL39LQ96EH5 51 aaKnown RBP8.17□□□□□ -1.1
SRGAP3-207ENST00000485983 SONP18583 2426 aaKnown RBP8.17□□□□□ -1.1
SRGAP3-207ENST00000485983 IGLV3-1P01715 115 aa8.17□□□□□ -1.1
SRGAP3-207ENST00000485983 SHISA2Q6UWI4 295 aa8.17□□□□□ -1.1
SRGAP3-207ENST00000485983 SPRNQ5BIV9 151 aa8.17□□□□□ -1.1
SRGAP3-207ENST00000485983 NTN5Q8WTR8 489 aaPredicted RBP8.17□□□□□ -1.1
SRGAP3-207ENST00000485983 A0A0J9YXV3 536 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 IGLL1P15814 213 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 WDR81Q562E7 1941 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 KIAA1671Q9BY89 1806 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 SEC61GP60059 68 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 TMEM263Q8WUH6 116 aaKnown RBP8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 DIRC1Q969H9 104 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 NCR3O14931 201 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 IGKV1-17P01599 117 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 C12orf74Q32Q52 190 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 Q6ZVH6 145 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 DEFB125Q8N687 156 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 IGKV2-24A0A0C4DH68 120 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 RS1O15537 224 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 GATA1P15976 413 aaPredicted RBP8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 FBXL19-AS1Q494R0 122 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 GTSF1Q8WW33 167 aa8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 FGF23Q9GZV9 251 aaPredicted RBP8.16□□□□□ -1.1
SRGAP3-207ENST00000485983 ADCYAP1P18509 176 aa8.15□□□□□ -1.1
SRGAP3-207ENST00000485983 KIR2DL5BQ8NHK3 375 aa8.15□□□□□ -1.1
SRGAP3-207ENST00000485983 ZNF524Q96C55 264 aa8.15□□□□□ -1.1
SRGAP3-207ENST00000485983 SPATA25Q9BR10 227 aa8.15□□□□□ -1.1
SRGAP3-207ENST00000485983 C14orf132Q9NPU4 83 aa8.15□□□□□ -1.1
SRGAP3-207ENST00000485983 WNK1Q9H4A3 2382 aa8.15□□□□□ -1.1
SRGAP3-207ENST00000485983 TMEM61Q8N0U2 210 aa8.15□□□□□ -1.1
SRGAP3-207ENST00000485983 NOTCH4Q99466 2003 aa8.15□□□□□ -1.1
SRGAP3-207ENST00000485983 DOCK11Q5JSL3 2073 aa8.15□□□□□ -1.1
SRGAP3-207ENST00000485983 A0A1W2PPM0 123 aa8.15□□□□□ -1.1
SRGAP3-207ENST00000485983 K7EP34 96 aa8.15□□□□□ -1.1
SRGAP3-207ENST00000485983 ASPHD1Q5U4P2 390 aa8.15□□□□□ -1.1
SRGAP3-207ENST00000485983 WFDC9Q8NEX5 89 aa8.15□□□□□ -1.11
SRGAP3-207ENST00000485983 ZNF747Q9BV97 191 aa8.14□□□□□ -1.11
SRGAP3-207ENST00000485983 LRCOL1A6NCL2 159 aa8.14□□□□□ -1.11
SRGAP3-207ENST00000485983 H0Y9J4 135 aa8.14□□□□□ -1.11
SRGAP3-207ENST00000485983 BAALCQ8WXS3 180 aa8.14□□□□□ -1.11
SRGAP3-207ENST00000485983 H3BMG7 143 aa8.14□□□□□ -1.11
SRGAP3-207ENST00000485983 ACYP1P07311 99 aa8.14□□□□□ -1.11
SRGAP3-207ENST00000485983 HIGD2BQ4VC39 106 aa8.14□□□□□ -1.11
SRGAP3-207ENST00000485983 A6NDX4 124 aa8.14□□□□□ -1.11
SRGAP3-207ENST00000485983 RITA1Q96K30 269 aa8.14□□□□□ -1.11
SRGAP3-207ENST00000485983 K7ERJ3 54 aa8.14□□□□□ -1.11
SRGAP3-207ENST00000485983 CCL25O15444 150 aa8.14□□□□□ -1.11
SRGAP3-207ENST00000485983 TNFRSF13BO14836 293 aaPredicted RBP8.13□□□□□ -1.11
SRGAP3-207ENST00000485983 INAFM1C9JVW0 142 aa8.13□□□□□ -1.11
SRGAP3-207ENST00000485983 SIRPDQ9H106 197 aa8.13□□□□□ -1.11
SRGAP3-207ENST00000485983 PRORYQ9H606 182 aa8.13□□□□□ -1.11
SRGAP3-207ENST00000485983 Q8N7P7 452 aa8.13□□□□□ -1.11
SRGAP3-207ENST00000485983 MYLKQ15746 1914 aa8.13□□□□□ -1.11
SRGAP3-207ENST00000485983 MED13Q9UHV7 2174 aa8.12□□□□□ -1.11
SRGAP3-207ENST00000485983 EML6Q6ZMW3 1958 aa8.12□□□□□ -1.11
SRGAP3-207ENST00000485983 PTPRDP23468 1912 aa8.12□□□□□ -1.11
SRGAP3-207ENST00000485983 GAGE12HA6NDE8 117 aa8.12□□□□□ -1.11
SRGAP3-207ENST00000485983 PROP1O75360 226 aa8.12□□□□□ -1.11
SRGAP3-207ENST00000485983 NDUFS6O75380 124 aaKnown RBP8.12□□□□□ -1.11
SRGAP3-207ENST00000485983 MED14OSP0DP75 135 aa8.12□□□□□ -1.11
SRGAP3-207ENST00000485983 DEFB131BA0A096LNP1 70 aa8.12□□□□□ -1.11
SRGAP3-207ENST00000485983 TRBV10-1A0A0K0K1A3 114 aa8.12□□□□□ -1.11
SRGAP3-207ENST00000485983 K7EP13 123 aa8.12□□□□□ -1.11
SRGAP3-207ENST00000485983 WI2-2373I1.2A0A1W2PRP0 233 aa8.12□□□□□ -1.11
SRGAP3-207ENST00000485983 K7EN84 100 aa8.12□□□□□ -1.11
SRGAP3-207ENST00000485983 SMIM9A6NGZ8 99 aa8.11□□□□□ -1.11
SRGAP3-207ENST00000485983 HIGD2AQ9BW72 106 aa8.11□□□□□ -1.11
SRGAP3-207ENST00000485983 TRAV26-1A0A087WT03 109 aa8.11□□□□□ -1.11
SRGAP3-207ENST00000485983 MUSTN1Q8IVN3 82 aa8.11□□□□□ -1.11
SRGAP3-207ENST00000485983 MAP6D1Q9H9H5 199 aa8.11□□□□□ -1.11
SRGAP3-207ENST00000485983 JMJD7-PLA2G4BH0Y9G9 81 aa8.11□□□□□ -1.11
SRGAP3-207ENST00000485983 IGLV1-47P01700 117 aa8.11□□□□□ -1.11
SRGAP3-207ENST00000485983 SPANXCQ9NY87 97 aa8.11□□□□□ -1.11
SRGAP3-207ENST00000485983 CACNA1AO00555 2505 aa8.1□□□□□ -1.11
SRGAP3-207ENST00000485983 PLXNA4Q9HCM2 1894 aa8.1□□□□□ -1.11
SRGAP3-207ENST00000485983 A0A0J9YX75 114 aa8.1□□□□□ -1.11
SRGAP3-207ENST00000485983 CRYGDP07320 174 aa8.1□□□□□ -1.11
SRGAP3-207ENST00000485983 C7orf33Q8WU49 177 aa8.1□□□□□ -1.11
SRGAP3-207ENST00000485983 A0A087WZ39 114 aa8.1□□□□□ -1.11
SRGAP3-207ENST00000485983 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
SRGAP3-207ENST00000485983 TEX22C9J3V5 150 aa8.1□□□□□ -1.11
SRGAP3-207ENST00000485983 MSRB1Q9NZV6 116 aa8.1□□□□□ -1.11
SRGAP3-207ENST00000485983 TSC2P49815 1807 aa8.1□□□□□ -1.11
SRGAP3-207ENST00000485983 PRAC2D3DTV9 90 aa8.1□□□□□ -1.11
SRGAP3-207ENST00000485983 SPG11Q96JI7 2443 aa8.1□□□□□ -1.11
SRGAP3-207ENST00000485983 COX7BP24311 80 aa8.09□□□□□ -1.11
SRGAP3-207ENST00000485983 WFDC11Q8NEX6 87 aa8.09□□□□□ -1.11
SRGAP3-207ENST00000485983 IGHV4-31P0DP07 118 aa8.09□□□□□ -1.11
SRGAP3-207ENST00000485983 A4D1N5 150 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms