RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 PRELID3AQ96N28 172 aa1.65□□□□□ -2.15
VPS41-213ENST00000485955 TTTY13Q9BZ97 58 aa1.65□□□□□ -2.15
VPS41-213ENST00000485955 Q9H521 79 aa1.65□□□□□ -2.15
VPS41-213ENST00000485955 OSTCQ9NRP0 149 aa1.65□□□□□ -2.15
VPS41-213ENST00000485955 RPRMQ9NS64 109 aa1.65□□□□□ -2.15
VPS41-213ENST00000485955 TAS2R8Q9NYW2 309 aa1.65□□□□□ -2.15
VPS41-213ENST00000485955 COMMD3Q9UBI1 195 aa1.65□□□□□ -2.15
VPS41-213ENST00000485955 EPDR1Q9UM22 224 aa1.65□□□□□ -2.15
VPS41-213ENST00000485955 IER3IP1Q9Y5U9 82 aa1.65□□□□□ -2.15
VPS41-213ENST00000485955 HLA-DRB4X5D2U9 266 aa1.65□□□□□ -2.15
VPS41-213ENST00000485955 MAP1AP78559 2803 aaPredicted RBP1.65□□□□□ -2.15
VPS41-213ENST00000485955 TRBV24-1A0A075B6N3 115 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 TRGV10A0A0A0MS01 117 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 C3orf84H3BNL1 204 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 M0R129 80 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 UQCRQO14949 82 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 LECT2O14960 151 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 HRASP01112 189 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 IGHV1-46P01743 117 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 MT-ND6P03923 174 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 TRGV3P03979 118 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 CD14P08571 375 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 SLC25A16P16260 332 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 AKR1C1Q04828 323 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 CATR1Q13166 79 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 C10orf91Q5T1B1 145 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 C16orf47Q6ZP98 133 aaPredicted RBP1.64□□□□□ -2.15
VPS41-213ENST00000485955 FOXI2Q6ZQN5 318 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 ADM2Q7Z4H4 148 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 TEN1Q86WV5 123 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 BPIFA4PQ86YQ2 179 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 LINC00311Q8N616 119 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 MIR7-3HGQ8N6C7 128 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 ZFP62Q8NB50 900 aaPredicted RBP1.64□□□□□ -2.15
VPS41-213ENST00000485955 APCDD1LQ8NCL9 501 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 PLPP5Q8NEB5 264 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 LINC01560Q8TB33 94 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 ZCCHC13Q8WW36 166 aaKnown RBP1.64□□□□□ -2.15
VPS41-213ENST00000485955 RBPMSQ93062 196 aaKnown RBP1.64□□□□□ -2.15
VPS41-213ENST00000485955 MCEEQ96PE7 176 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 SPANXDQ9BXN6 97 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 NPCDR1Q9BY65 106 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 C16orf95Q9H693 158 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 MYH7P12883 1935 aa1.64□□□□□ -2.15
VPS41-213ENST00000485955 MYH11P35749 1972 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 DNAH1Q9P2D7 4330 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 KNTC1P50748 2209 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 PNMA8CA0A1B0GUJ8 204 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 A6NED7 52 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 H3BQF6 201 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 SLC25A20O43772 301 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 HBDP02042 147 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 IL4P05112 153 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 SLC25A5P05141 298 aaKnown RBP1.63□□□□□ -2.15
VPS41-213ENST00000485955 CD2P06729 351 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 TRGC1P0CF51 173 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 PYYP10082 97 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 MRPL54Q6P161 138 aaKnown RBP1.63□□□□□ -2.15
VPS41-213ENST00000485955 SOSTDC1Q6X4U4 206 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 ZNF705AQ6ZN79 300 aaPredicted RBP1.63□□□□□ -2.15
VPS41-213ENST00000485955 TMEM91Q6ZNR0 172 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 ATOH7Q8N100 152 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 TTC9CQ8N5M4 171 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 CNEP1R1Q8N9A8 125 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 BPIFB6Q8NFQ5 453 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 OR4B1Q8NGF8 309 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 CLDND2Q8NHS1 167 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 COPS9Q8WXC6 57 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 DPH3Q96FX2 82 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 ZNF714Q96N38 554 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 SCGB3A1Q96QR1 104 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 TXNL4BQ9NX01 149 aaKnown RBP1.63□□□□□ -2.15
VPS41-213ENST00000485955 ZNF443Q9Y2A4 671 aaPredicted RBP1.63□□□□□ -2.15
VPS41-213ENST00000485955 TRAPPC1Q9Y5R8 145 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 DYSFO75923 2080 aa1.63□□□□□ -2.15
VPS41-213ENST00000485955 ZFC3H1O60293 1989 aaKnown RBP1.63□□□□□ -2.15
VPS41-213ENST00000485955 MYH7BA7E2Y1 1941 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 TRAV12-2A0A075B6T6 113 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 A0A0J9YW62 118 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 GRIFINA4D1Z8 144 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 H3BMM0 161 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 GEMIN2O14893 280 aaKnown RBP1.62□□□□□ -2.15
VPS41-213ENST00000485955 RER1O15258 196 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 SH2D1AO60880 128 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 KLF7O75840 302 aaPredicted RBP1.62□□□□□ -2.15
VPS41-213ENST00000485955 LY6HO94772 140 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 NPYP01303 97 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 IGHV1-69P01742 117 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 SPINK8P0C7L1 97 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 FXYD7P58549 80 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 KLRD1Q13241 179 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 KISS1Q15726 138 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 PYY3Q5JQD4 70 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 CLLU1Q5K131 121 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 C9orf153Q5TBE3 101 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 EIF5AL1Q6IS14 154 aaKnown RBP1.62□□□□□ -2.15
VPS41-213ENST00000485955 PATE2Q6UY27 113 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 SDIM1Q6ZPB5 146 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 Q6ZUT4 128 aa1.62□□□□□ -2.15
VPS41-213ENST00000485955 KCNRGQ8N5I3 272 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms