RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SLC25A29Q8N8R3 303 aa8.21□□□□□ -1.1
HPS4-214ENST00000485842 PRADC1Q9BSG0 188 aa8.21□□□□□ -1.1
HPS4-214ENST00000485842 NAT8Q9UHE5 227 aa8.21□□□□□ -1.1
HPS4-214ENST00000485842 IGLV2-18A0A075B6J9 118 aa8.2□□□□□ -1.1
HPS4-214ENST00000485842 TRBV6-4A0A1B0GX49 114 aa8.2□□□□□ -1.1
HPS4-214ENST00000485842 A0A1W2PPQ1 181 aa8.2□□□□□ -1.1
HPS4-214ENST00000485842 RPL23P62829 140 aaKnown RBP8.2□□□□□ -1.1
HPS4-214ENST00000485842 ZNF56Q15929 161 aa8.2□□□□□ -1.1
HPS4-214ENST00000485842 ESRGQ1W209 222 aa8.2□□□□□ -1.1
HPS4-214ENST00000485842 UFSP1Q6NVU6 142 aa8.2□□□□□ -1.1
HPS4-214ENST00000485842 LYZL1Q6UWQ5 148 aa8.2□□□□□ -1.1
HPS4-214ENST00000485842 Q6ZSN1 163 aa8.2□□□□□ -1.1
HPS4-214ENST00000485842 AP1S3Q96PC3 154 aa8.2□□□□□ -1.1
HPS4-214ENST00000485842 CRYGDP07320 174 aa8.19□□□□□ -1.1
HPS4-214ENST00000485842 CTRLP40313 264 aa8.19□□□□□ -1.1
HPS4-214ENST00000485842 CACNG7P62955 275 aa8.19□□□□□ -1.1
HPS4-214ENST00000485842 NEGR1Q7Z3B1 354 aa8.19□□□□□ -1.1
HPS4-214ENST00000485842 C14orf178Q8N769 122 aaPredicted RBP8.19□□□□□ -1.1
HPS4-214ENST00000485842 ISOC2Q96AB3 205 aa8.19□□□□□ -1.1
HPS4-214ENST00000485842 OSTCQ9NRP0 149 aa8.19□□□□□ -1.1
HPS4-214ENST00000485842 A8MWL6 223 aa8.18□□□□□ -1.1
HPS4-214ENST00000485842 F2Z2F3 143 aa8.18□□□□□ -1.1
HPS4-214ENST00000485842 M0R2N4 97 aa8.18□□□□□ -1.1
HPS4-214ENST00000485842 SMIM17P0DL12 118 aa8.18□□□□□ -1.1
HPS4-214ENST00000485842 FAM3BP58499 235 aaPredicted RBP8.18□□□□□ -1.1
HPS4-214ENST00000485842 CT83Q5H943 113 aa8.18□□□□□ -1.1
HPS4-214ENST00000485842 C15orf54Q8N8G6 183 aa8.18□□□□□ -1.1
HPS4-214ENST00000485842 MSRB1Q9NZV6 116 aa8.18□□□□□ -1.1
HPS4-214ENST00000485842 MRPS16Q9Y3D3 137 aaKnown RBP8.18□□□□□ -1.1
HPS4-214ENST00000485842 GAGE12JA6NER3 117 aa8.17□□□□□ -1.1
HPS4-214ENST00000485842 F5H697 171 aa8.17□□□□□ -1.1
HPS4-214ENST00000485842 MGPP08493 103 aa8.17□□□□□ -1.1
HPS4-214ENST00000485842 GAGE1Q13065 139 aa8.17□□□□□ -1.1
HPS4-214ENST00000485842 GAGE4Q13068 117 aa8.17□□□□□ -1.1
HPS4-214ENST00000485842 GAGE5Q13069 117 aa8.17□□□□□ -1.1
HPS4-214ENST00000485842 GAGE13Q4V321 117 aa8.17□□□□□ -1.1
HPS4-214ENST00000485842 OR10G8Q8NGN5 311 aa8.17□□□□□ -1.1
HPS4-214ENST00000485842 ZNRF2Q8NHG8 242 aa8.17□□□□□ -1.1
HPS4-214ENST00000485842 GTSF1Q8WW33 167 aa8.17□□□□□ -1.1
HPS4-214ENST00000485842 PGLYRP4Q96LB8 373 aa8.17□□□□□ -1.1
HPS4-214ENST00000485842 DNAH1Q9P2D7 4330 aa8.17□□□□□ -1.1
HPS4-214ENST00000485842 TRGC1P0CF51 173 aa8.16□□□□□ -1.1
HPS4-214ENST00000485842 NTF3P20783 257 aa8.16□□□□□ -1.1
HPS4-214ENST00000485842 LYPD5Q6UWN5 251 aa8.16□□□□□ -1.1
HPS4-214ENST00000485842 SH2D6Q7Z4S9 175 aa8.16□□□□□ -1.1
HPS4-214ENST00000485842 TSKUQ8WUA8 353 aa8.16□□□□□ -1.1
HPS4-214ENST00000485842 V9GYV3 84 aa8.16□□□□□ -1.1
HPS4-214ENST00000485842 EVI2AP22794 236 aa8.15□□□□□ -1.1
HPS4-214ENST00000485842 RAB4BP61018 213 aa8.15□□□□□ -1.1
HPS4-214ENST00000485842 TWIST1Q15672 202 aa8.15□□□□□ -1.1
HPS4-214ENST00000485842 BORCS7Q96B45 105 aa8.15□□□□□ -1.1
HPS4-214ENST00000485842 Q9UF83 564 aa8.15□□□□□ -1.1
HPS4-214ENST00000485842 KIF25-AS1Q9Y6Z4 181 aa8.15□□□□□ -1.1
HPS4-214ENST00000485842 SACSQ9NZJ4 4579 aa8.15□□□□□ -1.11
HPS4-214ENST00000485842 RYR2Q92736 4967 aa8.14□□□□□ -1.11
HPS4-214ENST00000485842 HIGD1CA8MV81 97 aa8.14□□□□□ -1.11
HPS4-214ENST00000485842 WDR73Q6P4I2 378 aa8.14□□□□□ -1.11
HPS4-214ENST00000485842 COMMD7Q86VX2 200 aa8.14□□□□□ -1.11
HPS4-214ENST00000485842 ATP6V0E2Q8NHE4 81 aa8.14□□□□□ -1.11
HPS4-214ENST00000485842 UPK3BQ9BT76 320 aa8.14□□□□□ -1.11
HPS4-214ENST00000485842 CNFNQ9BYD5 112 aa8.14□□□□□ -1.11
HPS4-214ENST00000485842 GFRA4Q9GZZ7 299 aa8.14□□□□□ -1.11
HPS4-214ENST00000485842 DPH3P1Q9H4G8 78 aa8.14□□□□□ -1.11
HPS4-214ENST00000485842 Q9H8V8 135 aa8.14□□□□□ -1.11
HPS4-214ENST00000485842 NBDYA0A0U1RRE5 68 aa8.13□□□□□ -1.11
HPS4-214ENST00000485842 LINC00694P0DN24 101 aa8.13□□□□□ -1.11
HPS4-214ENST00000485842 LINC00315P59091 139 aa8.13□□□□□ -1.11
HPS4-214ENST00000485842 RPL36AP83881 106 aaKnown RBP8.13□□□□□ -1.11
HPS4-214ENST00000485842 UQCC3Q6UW78 93 aa8.13□□□□□ -1.11
HPS4-214ENST00000485842 WFDC10BQ8IUB3 73 aa8.13□□□□□ -1.11
HPS4-214ENST00000485842 RPL36ALQ969Q0 106 aaKnown RBP8.13□□□□□ -1.11
HPS4-214ENST00000485842 TRBV10-1A0A0K0K1A3 114 aa8.12□□□□□ -1.11
HPS4-214ENST00000485842 A0A1B0GUT8 65 aa8.12□□□□□ -1.11
HPS4-214ENST00000485842 SIVA1O15304 175 aa8.12□□□□□ -1.11
HPS4-214ENST00000485842 SMIM15Q7Z3B0 74 aa8.12□□□□□ -1.11
HPS4-214ENST00000485842 NEXN-AS1Q8NBZ9 246 aa8.12□□□□□ -1.11
HPS4-214ENST00000485842 GTSF1LQ9H1H1 148 aa8.12□□□□□ -1.11
HPS4-214ENST00000485842 VPS13DQ5THJ4 4388 aa8.11□□□□□ -1.11
HPS4-214ENST00000485842 RYR3Q15413 4870 aa8.11□□□□□ -1.11
HPS4-214ENST00000485842 FAM231BA6NCW3 169 aa8.11□□□□□ -1.11
HPS4-214ENST00000485842 F8W036 122 aa8.11□□□□□ -1.11
HPS4-214ENST00000485842 FOXA3P55318 350 aaPredicted RBP8.11□□□□□ -1.11
HPS4-214ENST00000485842 TIRAPP58753 221 aa8.11□□□□□ -1.11
HPS4-214ENST00000485842 OR10J3Q5JRS4 329 aa8.11□□□□□ -1.11
HPS4-214ENST00000485842 SUMO4Q6EEV6 95 aa8.11□□□□□ -1.11
HPS4-214ENST00000485842 Q6ZR54 194 aa8.11□□□□□ -1.11
HPS4-214ENST00000485842 NUP35Q8NFH5 326 aa8.11□□□□□ -1.11
HPS4-214ENST00000485842 TRBV7-3A0A075B6L6 115 aa8.1□□□□□ -1.11
HPS4-214ENST00000485842 TRAV8-6A0A0B4J262 113 aa8.1□□□□□ -1.11
HPS4-214ENST00000485842 TMEM218A2RU14 115 aa8.1□□□□□ -1.11
HPS4-214ENST00000485842 LINC00862A6NCI5 91 aa8.1□□□□□ -1.11
HPS4-214ENST00000485842 H7C1H1 209 aa8.1□□□□□ -1.11
HPS4-214ENST00000485842 ADCYAP1P18509 176 aa8.1□□□□□ -1.11
HPS4-214ENST00000485842 UBE2D3P61077 147 aa8.1□□□□□ -1.11
HPS4-214ENST00000485842 UBE2D2P62837 147 aa8.1□□□□□ -1.11
HPS4-214ENST00000485842 PNRC1Q12796 327 aaPredicted RBP8.1□□□□□ -1.11
HPS4-214ENST00000485842 TTC32Q5I0X7 151 aa8.1□□□□□ -1.11
HPS4-214ENST00000485842 LELP1Q5T871 98 aa8.1□□□□□ -1.11
HPS4-214ENST00000485842 KRTAP1-5Q9BYS1 174 aa8.1□□□□□ -1.11
HPS4-214ENST00000485842 NAT8BQ9UHF3 227 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms