RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 HECTD4Q9Y4D8 3996 aa12.24□□□□□ -0.45
SREBF1-213ENST00000485080 IGHV3-73A0A0B4J1V6 119 aa12.23□□□□□ -0.45
SREBF1-213ENST00000485080 Q6ZSN1 163 aa12.23□□□□□ -0.45
SREBF1-213ENST00000485080 FAM231DQ6ZW35 169 aa12.23□□□□□ -0.45
SREBF1-213ENST00000485080 IGLV2-18A0A075B6J9 118 aa12.22□□□□□ -0.45
SREBF1-213ENST00000485080 NBDYA0A0U1RRE5 68 aa12.22□□□□□ -0.45
SREBF1-213ENST00000485080 A0A1W2PPQ1 181 aa12.22□□□□□ -0.45
SREBF1-213ENST00000485080 F2Z2F3 143 aa12.22□□□□□ -0.45
SREBF1-213ENST00000485080 FAM74A3Q4VXF1 159 aa12.22□□□□□ -0.45
SREBF1-213ENST00000485080 FER1L6-AS1Q8NA97 138 aa12.22□□□□□ -0.45
SREBF1-213ENST00000485080 SMIM7Q9BQ49 75 aa12.22□□□□□ -0.45
SREBF1-213ENST00000485080 LOC100131303A0A0U1RQF7 123 aa12.21□□□□□ -0.45
SREBF1-213ENST00000485080 PEA15Q15121 130 aa12.21□□□□□ -0.45
SREBF1-213ENST00000485080 SPANXN1Q5VSR9 72 aa12.21□□□□□ -0.45
SREBF1-213ENST00000485080 WDR73Q6P4I2 378 aa12.21□□□□□ -0.45
SREBF1-213ENST00000485080 RPP21Q9H633 154 aaKnown RBP12.21□□□□□ -0.45
SREBF1-213ENST00000485080 ZNF727A8MUV8 499 aa12.2□□□□□ -0.46
SREBF1-213ENST00000485080 M0R2N4 97 aa12.2□□□□□ -0.46
SREBF1-213ENST00000485080 LINC00694P0DN24 101 aa12.2□□□□□ -0.46
SREBF1-213ENST00000485080 GZMBP10144 247 aa12.2□□□□□ -0.46
SREBF1-213ENST00000485080 CEBPGP53567 150 aa12.2□□□□□ -0.46
SREBF1-213ENST00000485080 CACNG7P62955 275 aa12.2□□□□□ -0.46
SREBF1-213ENST00000485080 LINC01551Q86U37 167 aa12.2□□□□□ -0.46
SREBF1-213ENST00000485080 CNFNQ9BYD5 112 aa12.2□□□□□ -0.46
SREBF1-213ENST00000485080 RNASE7Q9H1E1 156 aaKnown RBP12.2□□□□□ -0.46
SREBF1-213ENST00000485080 A0A087WWL8 130 aa12.19□□□□□ -0.46
SREBF1-213ENST00000485080 BTF3P20290 206 aaKnown RBP12.19□□□□□ -0.46
SREBF1-213ENST00000485080 CTRLP40313 264 aa12.19□□□□□ -0.46
SREBF1-213ENST00000485080 CT83Q5H943 113 aa12.19□□□□□ -0.46
SREBF1-213ENST00000485080 TTC32Q5I0X7 151 aa12.19□□□□□ -0.46
SREBF1-213ENST00000485080 TRBV10-1A0A0K0K1A3 114 aa12.18□□□□□ -0.46
SREBF1-213ENST00000485080 C9JQL5 133 aa12.18□□□□□ -0.46
SREBF1-213ENST00000485080 RAB4BP61018 213 aa12.18□□□□□ -0.46
SREBF1-213ENST00000485080 FAM74A4Q5TZK3 123 aa12.18□□□□□ -0.46
SREBF1-213ENST00000485080 LINC00336Q6ZUF6 198 aa12.18□□□□□ -0.46
SREBF1-213ENST00000485080 C14orf178Q8N769 122 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-213ENST00000485080 KIF25-AS1Q9Y6Z4 181 aa12.18□□□□□ -0.46
SREBF1-213ENST00000485080 SIVA1O15304 175 aa12.17□□□□□ -0.46
SREBF1-213ENST00000485080 RAB14P61106 215 aa12.17□□□□□ -0.46
SREBF1-213ENST00000485080 SRSF3P84103 164 aaKnown RBP12.17□□□□□ -0.46
SREBF1-213ENST00000485080 AP1S3Q96PC3 154 aa12.17□□□□□ -0.46
SREBF1-213ENST00000485080 MUC21A0A0G2JKD1 596 aa12.16□□□□□ -0.46
SREBF1-213ENST00000485080 MUC21A0A140T8X8 626 aa12.16□□□□□ -0.46
SREBF1-213ENST00000485080 K7EP13 123 aa12.16□□□□□ -0.46
SREBF1-213ENST00000485080 FOXA3P55318 350 aaPredicted RBP12.16□□□□□ -0.46
SREBF1-213ENST00000485080 LINC00315P59091 139 aa12.16□□□□□ -0.46
SREBF1-213ENST00000485080 TMEM241Q24JQ0 296 aa12.16□□□□□ -0.46
SREBF1-213ENST00000485080 LYZL1Q6UWQ5 148 aa12.16□□□□□ -0.46
SREBF1-213ENST00000485080 ATP6V0E2Q8NHE4 81 aa12.16□□□□□ -0.46
SREBF1-213ENST00000485080 GTSF1LQ9H1H1 148 aa12.16□□□□□ -0.46
SREBF1-213ENST00000485080 OSTCQ9NRP0 149 aa12.16□□□□□ -0.46
SREBF1-213ENST00000485080 A8MWL6 223 aa12.15□□□□□ -0.46
SREBF1-213ENST00000485080 RTL8CO15255 209 aa12.15□□□□□ -0.46
SREBF1-213ENST00000485080 GATCO43716 136 aaKnown RBP12.15□□□□□ -0.46
SREBF1-213ENST00000485080 ERVFC1-1P60608 527 aa12.15□□□□□ -0.46
SREBF1-213ENST00000485080 SOHLH1Q5JUK2 328 aa12.15□□□□□ -0.46
SREBF1-213ENST00000485080 C1orf134Q5TEV5 83 aa12.15□□□□□ -0.46
SREBF1-213ENST00000485080 OR10G8Q8NGN5 311 aa12.15□□□□□ -0.46
SREBF1-213ENST00000485080 TPPP3Q9BW30 176 aa12.15□□□□□ -0.46
SREBF1-213ENST00000485080 Q9UF83 564 aa12.15□□□□□ -0.46
SREBF1-213ENST00000485080 PKD1P98161 4303 aa12.15□□□□□ -0.47
SREBF1-213ENST00000485080 PKHD1P08F94 4074 aa12.14□□□□□ -0.47
SREBF1-213ENST00000485080 BIRC6Q9NR09 4857 aa12.14□□□□□ -0.47
SREBF1-213ENST00000485080 FAM231BA6NCW3 169 aa12.14□□□□□ -0.47
SREBF1-213ENST00000485080 CLLU1Q5K131 121 aa12.14□□□□□ -0.47
SREBF1-213ENST00000485080 GTSF1Q8WW33 167 aa12.14□□□□□ -0.47
SREBF1-213ENST00000485080 GAGE12JA6NER3 117 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 TRGC1P0CF51 173 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 DNAH10OSP0CZ25 163 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 SMIM17P0DL12 118 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 GAGE1Q13065 139 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 GAGE4Q13068 117 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 GAGE5Q13069 117 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 GAGE13Q4V321 117 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 LELP1Q5T871 98 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 KRTAP1-5Q9BYS1 174 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 GFRA4Q9GZZ7 299 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 MSRB1Q9NZV6 116 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 NAT8Q9UHE5 227 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 DNAH11Q96DT5 4516 aa12.13□□□□□ -0.47
SREBF1-213ENST00000485080 NTF3P20783 257 aa12.12□□□□□ -0.47
SREBF1-213ENST00000485080 RPL23P62829 140 aaKnown RBP12.12□□□□□ -0.47
SREBF1-213ENST00000485080 IFITM2Q01629 132 aa12.12□□□□□ -0.47
SREBF1-213ENST00000485080 C6orf223Q8N319 242 aa12.12□□□□□ -0.47
SREBF1-213ENST00000485080 ISOC2Q96AB3 205 aa12.12□□□□□ -0.47
SREBF1-213ENST00000485080 TRBV7-3A0A075B6L6 115 aa12.11□□□□□ -0.47
SREBF1-213ENST00000485080 A0A087WWC5 75 aa12.11□□□□□ -0.47
SREBF1-213ENST00000485080 SSTP61278 116 aa12.11□□□□□ -0.47
SREBF1-213ENST00000485080 RPL36AP83881 106 aaKnown RBP12.11□□□□□ -0.47
SREBF1-213ENST00000485080 ZNF56Q15929 161 aa12.11□□□□□ -0.47
SREBF1-213ENST00000485080 TSKUQ8WUA8 353 aa12.11□□□□□ -0.47
SREBF1-213ENST00000485080 RPL36ALQ969Q0 106 aaKnown RBP12.11□□□□□ -0.47
SREBF1-213ENST00000485080 TRAV9-2A0A087WT02 112 aa12.1□□□□□ -0.47
SREBF1-213ENST00000485080 TRAV8-6A0A0B4J262 113 aa12.1□□□□□ -0.47
SREBF1-213ENST00000485080 EVI2AP22794 236 aa12.1□□□□□ -0.47
SREBF1-213ENST00000485080 UBE2D3P61077 147 aa12.1□□□□□ -0.47
SREBF1-213ENST00000485080 UBE2D2P62837 147 aa12.1□□□□□ -0.47
SREBF1-213ENST00000485080 WFDC10BQ8IUB3 73 aa12.1□□□□□ -0.47
SREBF1-213ENST00000485080 C15orf54Q8N8G6 183 aa12.1□□□□□ -0.47
SREBF1-213ENST00000485080 IGHV3-38A0A0C4DH36 116 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms