RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 RYR2Q92736 4967 aa12.51□□□□□ -0.41
CNKSR1-208ENST00000484874 IGHV3-73A0A0B4J1V6 119 aa12.5□□□□□ -0.41
CNKSR1-208ENST00000484874 GZMBP10144 247 aa12.5□□□□□ -0.41
CNKSR1-208ENST00000484874 SPANXN1Q5VSR9 72 aa12.5□□□□□ -0.41
CNKSR1-208ENST00000484874 ZNRF2Q8NHG8 242 aa12.5□□□□□ -0.41
CNKSR1-208ENST00000484874 MRPS16Q9Y3D3 137 aaKnown RBP12.5□□□□□ -0.41
CNKSR1-208ENST00000484874 SRIP30626 198 aa12.49□□□□□ -0.41
CNKSR1-208ENST00000484874 CACNG7P62955 275 aa12.49□□□□□ -0.41
CNKSR1-208ENST00000484874 LYPD5Q6UWN5 251 aa12.49□□□□□ -0.41
CNKSR1-208ENST00000484874 Q6ZSN1 163 aa12.49□□□□□ -0.41
CNKSR1-208ENST00000484874 GATCO43716 136 aaKnown RBP12.48□□□□□ -0.41
CNKSR1-208ENST00000484874 ERVFC1-1P60608 527 aa12.48□□□□□ -0.41
CNKSR1-208ENST00000484874 CT83Q5H943 113 aa12.48□□□□□ -0.41
CNKSR1-208ENST00000484874 OSTCQ9NRP0 149 aa12.48□□□□□ -0.41
CNKSR1-208ENST00000484874 HYDINQ4G0P3 5121 aa12.47□□□□□ -0.41
CNKSR1-208ENST00000484874 A8MWL6 223 aa12.47□□□□□ -0.41
CNKSR1-208ENST00000484874 FOXA3P55318 350 aaPredicted RBP12.47□□□□□ -0.41
CNKSR1-208ENST00000484874 TIRAPP58753 221 aa12.47□□□□□ -0.41
CNKSR1-208ENST00000484874 SOHLH1Q5JUK2 328 aa12.47□□□□□ -0.41
CNKSR1-208ENST00000484874 LYZL1Q6UWQ5 148 aa12.47□□□□□ -0.41
CNKSR1-208ENST00000484874 CNFNQ9BYD5 112 aa12.47□□□□□ -0.41
CNKSR1-208ENST00000484874 Q9H8V8 135 aa12.47□□□□□ -0.41
CNKSR1-208ENST00000484874 NAT8Q9UHE5 227 aa12.47□□□□□ -0.41
CNKSR1-208ENST00000484874 A0A087WWL8 130 aa12.46□□□□□ -0.41
CNKSR1-208ENST00000484874 MUC21A0A0G2JKD1 596 aa12.46□□□□□ -0.41
CNKSR1-208ENST00000484874 LOC100131303A0A0U1RQF7 123 aa12.46□□□□□ -0.41
CNKSR1-208ENST00000484874 MUC21A0A140T8X8 626 aa12.46□□□□□ -0.41
CNKSR1-208ENST00000484874 RAB4BP61018 213 aa12.46□□□□□ -0.41
CNKSR1-208ENST00000484874 FAM74A4Q5TZK3 123 aa12.46□□□□□ -0.41
CNKSR1-208ENST00000484874 CTRLP40313 264 aa12.45□□□□□ -0.42
CNKSR1-208ENST00000484874 RPL23P62829 140 aaKnown RBP12.45□□□□□ -0.42
CNKSR1-208ENST00000484874 Q6ZR54 194 aa12.45□□□□□ -0.42
CNKSR1-208ENST00000484874 TPPP3Q9BW30 176 aa12.45□□□□□ -0.42
CNKSR1-208ENST00000484874 KIF25-AS1Q9Y6Z4 181 aa12.45□□□□□ -0.42
CNKSR1-208ENST00000484874 TRBV10-1A0A0K0K1A3 114 aa12.44□□□□□ -0.42
CNKSR1-208ENST00000484874 FAM231BA6NCW3 169 aa12.44□□□□□ -0.42
CNKSR1-208ENST00000484874 NTF3P20783 257 aa12.44□□□□□ -0.42
CNKSR1-208ENST00000484874 C14orf178Q8N769 122 aaPredicted RBP12.44□□□□□ -0.42
CNKSR1-208ENST00000484874 ISOC2Q96AB3 205 aa12.44□□□□□ -0.42
CNKSR1-208ENST00000484874 LINC00315P59091 139 aa12.43□□□□□ -0.42
CNKSR1-208ENST00000484874 SSTP61278 116 aa12.43□□□□□ -0.42
CNKSR1-208ENST00000484874 C15orf54Q8N8G6 183 aa12.43□□□□□ -0.42
CNKSR1-208ENST00000484874 GTSF1Q8WW33 167 aa12.43□□□□□ -0.42
CNKSR1-208ENST00000484874 AP1S3Q96PC3 154 aa12.43□□□□□ -0.42
CNKSR1-208ENST00000484874 GFRA4Q9GZZ7 299 aa12.43□□□□□ -0.42
CNKSR1-208ENST00000484874 MSRB1Q9NZV6 116 aa12.43□□□□□ -0.42
CNKSR1-208ENST00000484874 DNAH6Q9C0G6 4158 aa12.42□□□□□ -0.42
CNKSR1-208ENST00000484874 IGLV2-18A0A075B6J9 118 aa12.42□□□□□ -0.42
CNKSR1-208ENST00000484874 TRGC1P0CF51 173 aa12.42□□□□□ -0.42
CNKSR1-208ENST00000484874 SMIM17P0DL12 118 aa12.42□□□□□ -0.42
CNKSR1-208ENST00000484874 LINC00694P0DN24 101 aa12.42□□□□□ -0.42
CNKSR1-208ENST00000484874 ATP6V0E2Q8NHE4 81 aa12.42□□□□□ -0.42
CNKSR1-208ENST00000484874 TSKUQ8WUA8 353 aa12.42□□□□□ -0.42
CNKSR1-208ENST00000484874 NBDYA0A0U1RRE5 68 aa12.41□□□□□ -0.42
CNKSR1-208ENST00000484874 M0R2N4 97 aa12.41□□□□□ -0.42
CNKSR1-208ENST00000484874 Q9UF83 564 aa12.41□□□□□ -0.42
CNKSR1-208ENST00000484874 V9GYV3 84 aa12.41□□□□□ -0.42
CNKSR1-208ENST00000484874 SIVA1O15304 175 aa12.4□□□□□ -0.42
CNKSR1-208ENST00000484874 ADIRFQ15847 76 aa12.4□□□□□ -0.42
CNKSR1-208ENST00000484874 GTSF1LQ9H1H1 148 aa12.4□□□□□ -0.42
CNKSR1-208ENST00000484874 GAGE12JA6NER3 117 aa12.39□□□□□ -0.43
CNKSR1-208ENST00000484874 GAGE1Q13065 139 aa12.39□□□□□ -0.43
CNKSR1-208ENST00000484874 GAGE4Q13068 117 aa12.39□□□□□ -0.43
CNKSR1-208ENST00000484874 GAGE5Q13069 117 aa12.39□□□□□ -0.43
CNKSR1-208ENST00000484874 TWIST1Q15672 202 aa12.39□□□□□ -0.43
CNKSR1-208ENST00000484874 GAGE13Q4V321 117 aa12.39□□□□□ -0.43
CNKSR1-208ENST00000484874 OR10G8Q8NGN5 311 aa12.39□□□□□ -0.43
CNKSR1-208ENST00000484874 TRBV7-3A0A075B6L6 115 aa12.38□□□□□ -0.43
CNKSR1-208ENST00000484874 F5H697 171 aa12.38□□□□□ -0.43
CNKSR1-208ENST00000484874 K7EP13 123 aa12.38□□□□□ -0.43
CNKSR1-208ENST00000484874 EVI2AP22794 236 aa12.38□□□□□ -0.43
CNKSR1-208ENST00000484874 RPL36AP83881 106 aaKnown RBP12.38□□□□□ -0.43
CNKSR1-208ENST00000484874 ZNF56Q15929 161 aa12.38□□□□□ -0.43
CNKSR1-208ENST00000484874 TTC32Q5I0X7 151 aa12.38□□□□□ -0.43
CNKSR1-208ENST00000484874 UQCC3Q6UW78 93 aa12.38□□□□□ -0.43
CNKSR1-208ENST00000484874 RPL36ALQ969Q0 106 aaKnown RBP12.38□□□□□ -0.43
CNKSR1-208ENST00000484874 DPH3P1Q9H4G8 78 aa12.38□□□□□ -0.43
CNKSR1-208ENST00000484874 BTF3P20290 206 aaKnown RBP12.37□□□□□ -0.43
CNKSR1-208ENST00000484874 LELP1Q5T871 98 aa12.37□□□□□ -0.43
CNKSR1-208ENST00000484874 PGLYRP4Q96LB8 373 aa12.37□□□□□ -0.43
CNKSR1-208ENST00000484874 HIGD1CA8MV81 97 aa12.36□□□□□ -0.43
CNKSR1-208ENST00000484874 A0A087WWC5 75 aa12.35□□□□□ -0.43
CNKSR1-208ENST00000484874 A0A1B0GUT8 65 aa12.35□□□□□ -0.43
CNKSR1-208ENST00000484874 H7C1H1 209 aa12.35□□□□□ -0.43
CNKSR1-208ENST00000484874 M0QY20 66 aa12.35□□□□□ -0.43
CNKSR1-208ENST00000484874 UBE2D3P61077 147 aa12.35□□□□□ -0.43
CNKSR1-208ENST00000484874 UBE2D2P62837 147 aa12.35□□□□□ -0.43
CNKSR1-208ENST00000484874 PNRC1Q12796 327 aaPredicted RBP12.35□□□□□ -0.43
CNKSR1-208ENST00000484874 SMIM15Q7Z3B0 74 aa12.35□□□□□ -0.43
CNKSR1-208ENST00000484874 NEXN-AS1Q8NBZ9 246 aa12.35□□□□□ -0.43
CNKSR1-208ENST00000484874 BORCS7Q96B45 105 aa12.35□□□□□ -0.43
CNKSR1-208ENST00000484874 TRAV9-2A0A087WT02 112 aa12.34□□□□□ -0.43
CNKSR1-208ENST00000484874 TRAV8-6A0A0B4J262 113 aa12.34□□□□□ -0.43
CNKSR1-208ENST00000484874 SMIM27A0A1W2PRY6 76 aa12.34□□□□□ -0.43
CNKSR1-208ENST00000484874 DNAH10OSP0CZ25 163 aa12.34□□□□□ -0.43
CNKSR1-208ENST00000484874 C1orf134Q5TEV5 83 aa12.34□□□□□ -0.43
CNKSR1-208ENST00000484874 LINC00336Q6ZUF6 198 aa12.34□□□□□ -0.43
CNKSR1-208ENST00000484874 DNAJC30Q96LL9 226 aa12.34□□□□□ -0.43
CNKSR1-208ENST00000484874 NAT8BQ9UHF3 227 aa12.34□□□□□ -0.43
CNKSR1-208ENST00000484874 NUP35Q8NFH5 326 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms