RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SLC48A1Q6P1K1 146 aa0.87□□□□□ -2.27
SMC4-215ENST00000484799 IFI27L1Q96BM0 104 aa0.87□□□□□ -2.27
SMC4-215ENST00000484799 LINC00470Q9BZP3 86 aa0.87□□□□□ -2.27
SMC4-215ENST00000484799 ZNF462Q96JM2 2506 aa0.87□□□□□ -2.27
SMC4-215ENST00000484799 ZNF469Q96JG9 3925 aaPredicted RBP0.86□□□□□ -2.27
SMC4-215ENST00000484799 FAM92AA1XBS5 289 aa0.86□□□□□ -2.27
SMC4-215ENST00000484799 RBAKDNA6NC62 111 aa0.86□□□□□ -2.27
SMC4-215ENST00000484799 A6NIN4 97 aa0.86□□□□□ -2.27
SMC4-215ENST00000484799 IFNA17P01571 189 aa0.86□□□□□ -2.27
SMC4-215ENST00000484799 IL5P05113 134 aa0.86□□□□□ -2.27
SMC4-215ENST00000484799 RPL37P61927 97 aaKnown RBP0.86□□□□□ -2.27
SMC4-215ENST00000484799 RPL7L1Q6DKI1 246 aaKnown RBP0.86□□□□□ -2.27
SMC4-215ENST00000484799 TSKUQ8WUA8 353 aa0.86□□□□□ -2.27
SMC4-215ENST00000484799 SPTSSAQ969W0 71 aa0.86□□□□□ -2.27
SMC4-215ENST00000484799 DSCR8Q96T75 97 aa0.86□□□□□ -2.27
SMC4-215ENST00000484799 TMEM242Q9NWH2 141 aa0.86□□□□□ -2.27
SMC4-215ENST00000484799 MYH9P35579 1960 aaKnown RBP0.85□□□□□ -2.27
SMC4-215ENST00000484799 NOTCH1P46531 2555 aa0.85□□□□□ -2.27
SMC4-215ENST00000484799 NDUFB6O95139 128 aa0.85□□□□□ -2.27
SMC4-215ENST00000484799 SSBP1Q04837 148 aaKnown RBP0.85□□□□□ -2.27
SMC4-215ENST00000484799 C9orf116Q5BN46 136 aaPredicted RBP0.85□□□□□ -2.27
SMC4-215ENST00000484799 DPH3Q96FX2 82 aa0.85□□□□□ -2.27
SMC4-215ENST00000484799 RPRMQ9NS64 109 aa0.85□□□□□ -2.27
SMC4-215ENST00000484799 TENM3Q9P273 2699 aa0.84□□□□□ -2.27
SMC4-215ENST00000484799 NAIPQ13075 1403 aa0.84□□□□□ -2.27
SMC4-215ENST00000484799 A0A096LNT2 108 aa0.84□□□□□ -2.27
SMC4-215ENST00000484799 TRAV12-3A0A0B4J271 114 aa0.84□□□□□ -2.27
SMC4-215ENST00000484799 FAM25AB3EWG3 89 aa0.84□□□□□ -2.27
SMC4-215ENST00000484799 FAM25CB3EWG5 89 aa0.84□□□□□ -2.27
SMC4-215ENST00000484799 FAM25GB3EWG6 89 aa0.84□□□□□ -2.27
SMC4-215ENST00000484799 TFF1P04155 84 aa0.84□□□□□ -2.27
SMC4-215ENST00000484799 C6orf52Q5T4I8 152 aa0.84□□□□□ -2.27
SMC4-215ENST00000484799 SNRNP25Q9BV90 132 aaKnown RBP0.84□□□□□ -2.27
SMC4-215ENST00000484799 KDM6BO15054 1643 aa0.84□□□□□ -2.28
SMC4-215ENST00000484799 MAP2P11137 1827 aaKnown RBP0.84□□□□□ -2.28
SMC4-215ENST00000484799 PLXNA1Q9UIW2 1896 aa0.84□□□□□ -2.28
SMC4-215ENST00000484799 FBN2P35556 2912 aa0.83□□□□□ -2.28
SMC4-215ENST00000484799 PIGBOS1A0A0B4J2F0 54 aa0.83□□□□□ -2.28
SMC4-215ENST00000484799 SNCGO76070 127 aa0.83□□□□□ -2.28
SMC4-215ENST00000484799 APODP05090 189 aa0.83□□□□□ -2.28
SMC4-215ENST00000484799 CCL3L1P16619 93 aa0.83□□□□□ -2.28
SMC4-215ENST00000484799 FAM74A4Q5TZK3 123 aa0.83□□□□□ -2.28
SMC4-215ENST00000484799 ABCA1O95477 2261 aa0.82□□□□□ -2.28
SMC4-215ENST00000484799 CFTRP13569 1480 aa0.82□□□□□ -2.28
SMC4-215ENST00000484799 ZNF518AQ6AHZ1 1483 aa0.82□□□□□ -2.28
SMC4-215ENST00000484799 A0A0D9SG42 100 aa0.82□□□□□ -2.28
SMC4-215ENST00000484799 LY6G6CO95867 125 aa0.82□□□□□ -2.28
SMC4-215ENST00000484799 CBLN1P23435 193 aa0.82□□□□□ -2.28
SMC4-215ENST00000484799 ELOF1P60002 83 aaKnown RBP0.82□□□□□ -2.28
SMC4-215ENST00000484799 NPC2P61916 151 aa0.82□□□□□ -2.28
SMC4-215ENST00000484799 PDCD10Q9BUL8 212 aa0.82□□□□□ -2.28
SMC4-215ENST00000484799 SPEF2Q9C093 1822 aa0.82□□□□□ -2.28
SMC4-215ENST00000484799 BCL9LQ86UU0 1499 aa0.81□□□□□ -2.28
SMC4-215ENST00000484799 GNG7O60262 68 aa0.81□□□□□ -2.28
SMC4-215ENST00000484799 BTG2P78543 158 aa0.81□□□□□ -2.28
SMC4-215ENST00000484799 C12orf73Q69YU5 71 aa0.81□□□□□ -2.28
SMC4-215ENST00000484799 RPL13AP3Q6NVV1 102 aa0.81□□□□□ -2.28
SMC4-215ENST00000484799 RERGLQ9H628 205 aa0.81□□□□□ -2.28
SMC4-215ENST00000484799 C10orf95Q9H7T3 257 aa0.81□□□□□ -2.28
SMC4-215ENST00000484799 MED13LQ71F56 2210 aa0.81□□□□□ -2.28
SMC4-215ENST00000484799 MYH7P12883 1935 aa0.8□□□□□ -2.28
SMC4-215ENST00000484799 FGF7P21781 194 aa0.8□□□□□ -2.28
SMC4-215ENST00000484799 UBE2G1P62253 170 aa0.8□□□□□ -2.28
SMC4-215ENST00000484799 SPATA8Q6RVD6 105 aa0.8□□□□□ -2.28
SMC4-215ENST00000484799 C4orf33Q8N1A6 199 aa0.8□□□□□ -2.28
SMC4-215ENST00000484799 C20orf197Q8N268 126 aa0.8□□□□□ -2.28
SMC4-215ENST00000484799 COX7B2Q8TF08 81 aa0.8□□□□□ -2.28
SMC4-215ENST00000484799 NAV3Q8IVL0 2385 aa0.8□□□□□ -2.28
SMC4-215ENST00000484799 NRXN2Q9P2S2 1712 aa0.8□□□□□ -2.28
SMC4-215ENST00000484799 JMJD1CQ15652 2540 aa0.8□□□□□ -2.28
SMC4-215ENST00000484799 IBTKQ9P2D0 1353 aaPredicted RBP0.8□□□□□ -2.28
SMC4-215ENST00000484799 MUC22E2RYF6 1773 aaPredicted RBP0.8□□□□□ -2.28
SMC4-215ENST00000484799 PARP14Q460N5 1801 aa0.8□□□□□ -2.28
SMC4-215ENST00000484799 PHIPQ8WWQ0 1821 aa0.8□□□□□ -2.28
SMC4-215ENST00000484799 PHLPP1O60346 1717 aa0.79□□□□□ -2.28
SMC4-215ENST00000484799 LOC285556D6RIA3 1793 aa0.79□□□□□ -2.28
SMC4-215ENST00000484799 ZNF818PQ6ZRF7 136 aa0.79□□□□□ -2.28
SMC4-215ENST00000484799 AGPAT4-IT1Q9H0P7 198 aa0.79□□□□□ -2.28
SMC4-215ENST00000484799 NAA60Q9H7X0 242 aa0.79□□□□□ -2.28
SMC4-215ENST00000484799 APCP25054 2843 aa0.78□□□□□ -2.28
SMC4-215ENST00000484799 TRBV7-1A0A0A6YYK4 115 aa0.78□□□□□ -2.28
SMC4-215ENST00000484799 TRBV10-3A0A0K0K1G6 114 aa0.78□□□□□ -2.28
SMC4-215ENST00000484799 F2Z2F3 143 aa0.78□□□□□ -2.28
SMC4-215ENST00000484799 UBE2D1P51668 147 aa0.78□□□□□ -2.28
SMC4-215ENST00000484799 CCL8P80075 99 aa0.78□□□□□ -2.28
SMC4-215ENST00000484799 MEIG1Q5JSS6 88 aa0.78□□□□□ -2.28
SMC4-215ENST00000484799 Q6AWC8 147 aa0.78□□□□□ -2.28
SMC4-215ENST00000484799 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.78□□□□□ -2.28
SMC4-215ENST00000484799 SEC11CQ9BY50 192 aa0.78□□□□□ -2.28
SMC4-215ENST00000484799 SERP1Q9Y6X1 66 aa0.78□□□□□ -2.28
SMC4-215ENST00000484799 V9GYV3 84 aa0.78□□□□□ -2.28
SMC4-215ENST00000484799 IFT140Q96RY7 1462 aa0.78□□□□□ -2.28
SMC4-215ENST00000484799 FOCADQ5VW36 1801 aa0.78□□□□□ -2.29
SMC4-215ENST00000484799 TANC1Q9C0D5 1861 aa0.78□□□□□ -2.29
SMC4-215ENST00000484799 A0A087WTM6 91 aa0.77□□□□□ -2.29
SMC4-215ENST00000484799 HIST1H1DP16402 221 aaKnown RBP0.77□□□□□ -2.29
SMC4-215ENST00000484799 C10orf82Q8WW14 230 aa0.77□□□□□ -2.29
SMC4-215ENST00000484799 BPESC1Q9GZL8 116 aa0.77□□□□□ -2.29
SMC4-215ENST00000484799 SCP2D1Q9UJQ7 156 aa0.77□□□□□ -2.29
SMC4-215ENST00000484799 CDK13Q14004 1512 aaKnown RBP0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms