RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, human

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIF1-210	ENST00000484077	AKR1C3	P42330	323 aa		4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	UBE2G1	P62253	170 aa		4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	TMEM183B	Q1AE95	376 aa		4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	KIAA1644	Q3SXP7	199 aa		4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	TDRG1	Q3Y452	100 aa		4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	EIF5AL1	Q6IS14	154 aa	Known RBP	4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	PRNT	Q86SH4	94 aa		4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	TMEM183A	Q8IXX5	376 aa		4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	HIST1H2BA	Q96A08	127 aa		4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	NKX6-2	Q9C056	277 aa	Predicted RBP	4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	MRPL16	Q9NX20	251 aa	Known RBP	4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	KLF12	Q9Y4X4	402 aa		4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	EPPK1	P58107	5090 aa	Known RBP	4.26	□□□□□ -1.73
RIF1-210	ENST00000484077	TRAV34	A0A0B4J273	112 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	PFN1	P07737	140 aa	Known RBP	4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	ZNF80	P51504	273 aa	Predicted RBP	4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	SMUG1	Q53HV7	270 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	SAPCD1	Q5SSQ6	148 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	CST9LP1	Q5W188	147 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	SLC51B	Q86UW2	128 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	C9orf62	Q8N4C0	152 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	SFT2D1	Q8WV19	159 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	MBD3L1	Q8WWY6	194 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	FMC1	Q96HJ9	113 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	KCNS1	Q96KK3	526 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	LINC00479	Q96M42	142 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	C18orf15	Q96N68	181 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	MANBAL	Q9NQG1	85 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	DNAH10	Q8IVF4	4471 aa		4.25	□□□□□ -1.73
RIF1-210	ENST00000484077	DNAH2	Q9P225	4427 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077	TRAV26-1	A0A087WT03	109 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077	IGHV3-16	A0A0C4DH30	117 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077		A0A0J9YY99	117 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077		A0A1B0GVG6	124 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077	TEX46	H3BTG2	121 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077	IGHV3-53	P01767	116 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077	SULT1A2	P50226	295 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077	RAB5C	P51148	216 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077	OR5I1	Q13606	314 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077	LGALS9B	Q3B8N2	356 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077	CFAP161	Q6P656	301 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077	POM121L12	Q8N7R1	296 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077	SPX	Q9BT56	116 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077	GNG13	Q9P2W3	67 aa		4.24	□□□□□ -1.73
RIF1-210	ENST00000484077	MUC4	Q99102	2169 aa		4.23	□□□□□ -1.73
RIF1-210	ENST00000484077	TRBV6-1	A0A0K0K1D8	114 aa		4.23	□□□□□ -1.73
RIF1-210	ENST00000484077		M0R2P5	195 aa		4.23	□□□□□ -1.73
RIF1-210	ENST00000484077	LTA	P01374	205 aa		4.23	□□□□□ -1.73
RIF1-210	ENST00000484077	IFNA1	P01562	189 aa		4.23	□□□□□ -1.73
RIF1-210	ENST00000484077	RNF212	Q495C1	297 aa		4.23	□□□□□ -1.73
RIF1-210	ENST00000484077	ZC2HC1A	Q96GY0	325 aa		4.23	□□□□□ -1.73
RIF1-210	ENST00000484077	OPRPN	Q99935	248 aa	Predicted RBP	4.23	□□□□□ -1.73
RIF1-210	ENST00000484077	IGLV2-18	A0A075B6J9	118 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	TRAV1-1	A0A0B4J248	108 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	TRAV4	A0A0B4J268	109 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077		H3BNG1	76 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077		H3BVH4	76 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	GNRH2	O43555	120 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	SH2D1A	O60880	128 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	SFTA3	P0C7M3	94 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	ASIP	P42127	132 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	NKX2-5	P52952	324 aa	Predicted RBP	4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	FAM162B	Q5T6X4	162 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	NHLRC2	Q8NBF2	726 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	C11orf52	Q96A22	123 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	C9orf85	Q96MD7	179 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	ZFP30	Q9Y2G7	519 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	ICOS	Q9Y6W8	199 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	FAT2	Q9NYQ8	4349 aa		4.22	□□□□□ -1.73
RIF1-210	ENST00000484077	IGKV3D-20	A0A0C4DH25	116 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	TRGV4	A0A0C4DH28	118 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	FABP5P3	A8MUU1	101 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077		B4DEV8	164 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077		C9JCJ5	164 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077		M0R036	132 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	SCGB1D1	O95968	90 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	S100A9	P06702	114 aa	Known RBP	4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	BCL2	P10415	239 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	RNASE3	P12724	160 aa	Known RBP	4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	S100A4	P26447	101 aa	Known RBP	4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	RPL35	P42766	123 aa	Known RBP	4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	CRYBA4	P53673	196 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	CCL18	P55774	89 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	MEF2B	Q02080	365 aa	Predicted RBP	4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	ZNF506	Q5JVG8	444 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	PRR27	Q6MZM9	219 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	ALKAL2	Q6UX46	152 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	COX8C	Q7Z4L0	72 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	OR4C5	Q8NGB2	326 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	PCNP	Q8WW12	178 aa	Known RBP	4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	RASL10A	Q92737	203 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	VSIG2	Q96IQ7	327 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	TXNDC17	Q9BRA2	123 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	DERL1	Q9BUN8	251 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	PRO0255	Q9UI72	69 aa		4.21	□□□□□ -1.74
RIF1-210	ENST00000484077	TMSB15B	A0A087X1C1	80 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077		A0A096LPF7	62 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077	KRBOX1	C9JBD0	128 aa		4.2	□□□□□ -1.74
RIF1-210	ENST00000484077		M0R2N4	97 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms