RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 CACNA1HO95180 2353 aa0.55□□□□□ -2.32
NSMCE4A-210ENST00000483541 TNS1Q9HBL0 1735 aaKnown RBP0.55□□□□□ -2.32
NSMCE4A-210ENST00000483541 NRXN2Q9P2S2 1712 aa0.55□□□□□ -2.32
NSMCE4A-210ENST00000483541 MYOM3Q5VTT5 1437 aa0.55□□□□□ -2.32
NSMCE4A-210ENST00000483541 RBAKDNA6NC62 111 aa0.54□□□□□ -2.32
NSMCE4A-210ENST00000483541 F2Z2F3 143 aa0.54□□□□□ -2.32
NSMCE4A-210ENST00000483541 NPFFO15130 113 aa0.54□□□□□ -2.32
NSMCE4A-210ENST00000483541 COPZ1P61923 177 aa0.54□□□□□ -2.32
NSMCE4A-210ENST00000483541 RRAS2P62070 204 aaPredicted RBP0.54□□□□□ -2.32
NSMCE4A-210ENST00000483541 SPCS2Q15005 226 aa0.54□□□□□ -2.32
NSMCE4A-210ENST00000483541 RPL7L1Q6DKI1 246 aaKnown RBP0.54□□□□□ -2.32
NSMCE4A-210ENST00000483541 SLC48A1Q6P1K1 146 aa0.54□□□□□ -2.32
NSMCE4A-210ENST00000483541 SCIMPQ6UWF3 145 aa0.54□□□□□ -2.32
NSMCE4A-210ENST00000483541 Q6ZUT4 128 aa0.54□□□□□ -2.32
NSMCE4A-210ENST00000483541 TCEAL4Q96EI5 215 aa0.54□□□□□ -2.32
NSMCE4A-210ENST00000483541 NDUFA12Q9UI09 145 aa0.54□□□□□ -2.32
NSMCE4A-210ENST00000483541 CADP27708 2225 aa0.53□□□□□ -2.32
NSMCE4A-210ENST00000483541 MUC22E2RYF6 1773 aaPredicted RBP0.53□□□□□ -2.32
NSMCE4A-210ENST00000483541 TRAV12-3A0A0B4J271 114 aa0.53□□□□□ -2.32
NSMCE4A-210ENST00000483541 PIRTP0C851 137 aa0.53□□□□□ -2.32
NSMCE4A-210ENST00000483541 RPS25P62851 125 aaKnown RBP0.53□□□□□ -2.32
NSMCE4A-210ENST00000483541 TSKUQ8WUA8 353 aa0.53□□□□□ -2.32
NSMCE4A-210ENST00000483541 BDP1A6H8Y1 2624 aa0.53□□□□□ -2.32
NSMCE4A-210ENST00000483541 TMEM2Q9UHN6 1383 aa0.53□□□□□ -2.32
NSMCE4A-210ENST00000483541 APCP25054 2843 aa0.52□□□□□ -2.33
NSMCE4A-210ENST00000483541 A0A096LNT2 108 aa0.52□□□□□ -2.33
NSMCE4A-210ENST00000483541 IL5P05113 134 aa0.52□□□□□ -2.33
NSMCE4A-210ENST00000483541 PIPP12273 146 aaPredicted RBP0.52□□□□□ -2.33
NSMCE4A-210ENST00000483541 CCL3L1P16619 93 aa0.52□□□□□ -2.33
NSMCE4A-210ENST00000483541 ARPC4P59998 168 aa0.52□□□□□ -2.33
NSMCE4A-210ENST00000483541 ELOF1P60002 83 aaKnown RBP0.52□□□□□ -2.33
NSMCE4A-210ENST00000483541 NPC2P61916 151 aa0.52□□□□□ -2.33
NSMCE4A-210ENST00000483541 S100A12P80511 92 aa0.52□□□□□ -2.33
NSMCE4A-210ENST00000483541 FAM74A4Q5TZK3 123 aa0.52□□□□□ -2.33
NSMCE4A-210ENST00000483541 SOGA1O94964 1423 aa0.52□□□□□ -2.33
NSMCE4A-210ENST00000483541 DAPK1P53355 1430 aa0.52□□□□□ -2.33
NSMCE4A-210ENST00000483541 MYH7P12883 1935 aa0.52□□□□□ -2.33
NSMCE4A-210ENST00000483541 A6NIN4 97 aa0.51□□□□□ -2.33
NSMCE4A-210ENST00000483541 GUCA1AP43080 201 aaPredicted RBP0.51□□□□□ -2.33
NSMCE4A-210ENST00000483541 EMX2Q04743 252 aa0.51□□□□□ -2.33
NSMCE4A-210ENST00000483541 SSBP1Q04837 148 aaKnown RBP0.51□□□□□ -2.33
NSMCE4A-210ENST00000483541 C4orf33Q8N1A6 199 aa0.51□□□□□ -2.33
NSMCE4A-210ENST00000483541 C20orf197Q8N268 126 aa0.51□□□□□ -2.33
NSMCE4A-210ENST00000483541 KCNRGQ8N5I3 272 aa0.51□□□□□ -2.33
NSMCE4A-210ENST00000483541 BPESC1Q9GZL8 116 aa0.51□□□□□ -2.33
NSMCE4A-210ENST00000483541 TMEM191AQ9H0A3 160 aa0.51□□□□□ -2.33
NSMCE4A-210ENST00000483541 RPRMQ9NS64 109 aa0.51□□□□□ -2.33
NSMCE4A-210ENST00000483541 TMEM242Q9NWH2 141 aa0.51□□□□□ -2.33
NSMCE4A-210ENST00000483541 BICRAQ9NZM4 1560 aa0.51□□□□□ -2.33
NSMCE4A-210ENST00000483541 ARFGEF1Q9Y6D6 1849 aa0.51□□□□□ -2.33
NSMCE4A-210ENST00000483541 TTC28Q96AY4 2481 aa0.5□□□□□ -2.33
NSMCE4A-210ENST00000483541 DOCK11Q5JSL3 2073 aa0.5□□□□□ -2.33
NSMCE4A-210ENST00000483541 CDK13Q14004 1512 aaKnown RBP0.5□□□□□ -2.33
NSMCE4A-210ENST00000483541 GRIN2AQ12879 1464 aa0.5□□□□□ -2.33
NSMCE4A-210ENST00000483541 IFNA17P01571 189 aa0.5□□□□□ -2.33
NSMCE4A-210ENST00000483541 CCDC58Q4VC31 144 aa0.5□□□□□ -2.33
NSMCE4A-210ENST00000483541 COX7B2Q8TF08 81 aa0.5□□□□□ -2.33
NSMCE4A-210ENST00000483541 SPTSSAQ969W0 71 aa0.5□□□□□ -2.33
NSMCE4A-210ENST00000483541 PRR15LQ9BU68 103 aa0.5□□□□□ -2.33
NSMCE4A-210ENST00000483541 PTPRZ1P23471 2315 aaPredicted RBP0.5□□□□□ -2.33
NSMCE4A-210ENST00000483541 MYH8P13535 1937 aa0.5□□□□□ -2.33
NSMCE4A-210ENST00000483541 NWD2Q9ULI1 1742 aa0.5□□□□□ -2.33
NSMCE4A-210ENST00000483541 LAMC3Q9Y6N6 1575 aa0.49□□□□□ -2.33
NSMCE4A-210ENST00000483541 PITX3O75364 302 aa0.49□□□□□ -2.33
NSMCE4A-210ENST00000483541 SNCGO76070 127 aa0.49□□□□□ -2.33
NSMCE4A-210ENST00000483541 TSC22D3Q99576 134 aa0.49□□□□□ -2.33
NSMCE4A-210ENST00000483541 FAM107BQ9H098 131 aa0.49□□□□□ -2.33
NSMCE4A-210ENST00000483541 CCDC167Q9P0B6 97 aa0.49□□□□□ -2.33
NSMCE4A-210ENST00000483541 PIEZO1Q92508 2521 aa0.48□□□□□ -2.33
NSMCE4A-210ENST00000483541 PRH1P02810 166 aa0.48□□□□□ -2.33
NSMCE4A-210ENST00000483541 C9orf116Q5BN46 136 aaPredicted RBP0.48□□□□□ -2.33
NSMCE4A-210ENST00000483541 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.48□□□□□ -2.33
NSMCE4A-210ENST00000483541 C10orf82Q8WW14 230 aa0.48□□□□□ -2.33
NSMCE4A-210ENST00000483541 V9GYV3 84 aa0.48□□□□□ -2.33
NSMCE4A-210ENST00000483541 SIPA1L3O60292 1781 aaPredicted RBP0.47□□□□□ -2.33
NSMCE4A-210ENST00000483541 PHLPP1O60346 1717 aa0.47□□□□□ -2.33
NSMCE4A-210ENST00000483541 F8P00451 2351 aa0.47□□□□□ -2.33
NSMCE4A-210ENST00000483541 TPRP12270 2363 aaKnown RBP0.47□□□□□ -2.33
NSMCE4A-210ENST00000483541 KDM6BO15054 1643 aa0.47□□□□□ -2.33
NSMCE4A-210ENST00000483541 A0A087WTM6 91 aa0.47□□□□□ -2.33
NSMCE4A-210ENST00000483541 TRBV7-1A0A0A6YYK4 115 aa0.47□□□□□ -2.33
NSMCE4A-210ENST00000483541 NDUFB6O95139 128 aa0.47□□□□□ -2.33
NSMCE4A-210ENST00000483541 APODP05090 189 aa0.47□□□□□ -2.33
NSMCE4A-210ENST00000483541 UBE2G1P62253 170 aa0.47□□□□□ -2.33
NSMCE4A-210ENST00000483541 SMIM11BQ8TCY0 68 aa0.47□□□□□ -2.33
NSMCE4A-210ENST00000483541 SCP2D1Q9UJQ7 156 aa0.47□□□□□ -2.33
NSMCE4A-210ENST00000483541 UNC13BO14795 1591 aa0.46□□□□□ -2.34
NSMCE4A-210ENST00000483541 POLQO75417 2590 aa0.46□□□□□ -2.34
NSMCE4A-210ENST00000483541 ABCA12Q86UK0 2595 aa0.46□□□□□ -2.34
NSMCE4A-210ENST00000483541 FAM92AA1XBS5 289 aa0.46□□□□□ -2.34
NSMCE4A-210ENST00000483541 HMGN1P05114 100 aa0.46□□□□□ -2.34
NSMCE4A-210ENST00000483541 S100A7L2Q5SY68 101 aa0.46□□□□□ -2.34
NSMCE4A-210ENST00000483541 COPS9Q8WXC6 57 aa0.46□□□□□ -2.34
NSMCE4A-210ENST00000483541 ARL11Q969Q4 196 aa0.46□□□□□ -2.34
NSMCE4A-210ENST00000483541 SDF2Q99470 211 aa0.46□□□□□ -2.34
NSMCE4A-210ENST00000483541 SMR3AQ99954 134 aa0.46□□□□□ -2.34
NSMCE4A-210ENST00000483541 PDCD10Q9BUL8 212 aa0.46□□□□□ -2.34
NSMCE4A-210ENST00000483541 AHNAKQ09666 5890 aaKnown RBP0.46□□□□□ -2.34
NSMCE4A-210ENST00000483541 ZFYVE26Q68DK2 2539 aa0.45□□□□□ -2.34
NSMCE4A-210ENST00000483541 IGF2RP11717 2491 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms