RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 SSBP4Q9BWG4 385 aaPredicted RBP9.19□□□□□ -0.94
SSR1-208ENST00000483409 RNASE7Q9H1E1 156 aaKnown RBP9.19□□□□□ -0.94
SSR1-208ENST00000483409 RTL8CO15255 209 aa9.18□□□□□ -0.94
SSR1-208ENST00000483409 C1orf134Q5TEV5 83 aa9.18□□□□□ -0.94
SSR1-208ENST00000483409 SH2D6Q7Z4S9 175 aa9.18□□□□□ -0.94
SSR1-208ENST00000483409 FER1L6-AS1Q8NA97 138 aa9.18□□□□□ -0.94
SSR1-208ENST00000483409 NUDT10Q8NFP7 164 aa9.18□□□□□ -0.94
SSR1-208ENST00000483409 NUDT11Q96G61 164 aa9.18□□□□□ -0.94
SSR1-208ENST00000483409 KRTAP1-5Q9BYS1 174 aa9.18□□□□□ -0.94
SSR1-208ENST00000483409 FAT2Q9NYQ8 4349 aa9.17□□□□□ -0.94
SSR1-208ENST00000483409 XKRY2A2RUG3 117 aa9.17□□□□□ -0.94
SSR1-208ENST00000483409 GAGE12JA6NER3 117 aa9.17□□□□□ -0.94
SSR1-208ENST00000483409 SIVA1O15304 175 aa9.17□□□□□ -0.94
SSR1-208ENST00000483409 SRP19P09132 144 aaKnown RBP9.17□□□□□ -0.94
SSR1-208ENST00000483409 IGLC6P0CF74 106 aa9.17□□□□□ -0.94
SSR1-208ENST00000483409 GAGE1Q13065 139 aa9.17□□□□□ -0.94
SSR1-208ENST00000483409 GAGE4Q13068 117 aa9.17□□□□□ -0.94
SSR1-208ENST00000483409 GAGE5Q13069 117 aa9.17□□□□□ -0.94
SSR1-208ENST00000483409 GAGE13Q4V321 117 aa9.17□□□□□ -0.94
SSR1-208ENST00000483409 TTC32Q5I0X7 151 aa9.17□□□□□ -0.94
SSR1-208ENST00000483409 SMIM7Q9BQ49 75 aa9.17□□□□□ -0.94
SSR1-208ENST00000483409 Q9UF83 564 aa9.17□□□□□ -0.94
SSR1-208ENST00000483409 DNAH17Q9UFH2 4485 aa9.17□□□□□ -0.94
SSR1-208ENST00000483409 SOHLH1Q5JUK2 328 aa9.16□□□□□ -0.94
SSR1-208ENST00000483409 LINC00336Q6ZUF6 198 aa9.16□□□□□ -0.94
SSR1-208ENST00000483409 WFDC10BQ8IUB3 73 aa9.16□□□□□ -0.94
SSR1-208ENST00000483409 C6orf223Q8N319 242 aa9.16□□□□□ -0.94
SSR1-208ENST00000483409 RPP21Q9H633 154 aaKnown RBP9.16□□□□□ -0.94
SSR1-208ENST00000483409 PRSS29PA6NIE9 313 aa9.15□□□□□ -0.94
SSR1-208ENST00000483409 ZNF727A8MUV8 499 aa9.15□□□□□ -0.94
SSR1-208ENST00000483409 NDUFS6O75380 124 aaKnown RBP9.15□□□□□ -0.94
SSR1-208ENST00000483409 ZNF56Q15929 161 aa9.15□□□□□ -0.94
SSR1-208ENST00000483409 ATP6V0E2Q8NHE4 81 aa9.15□□□□□ -0.94
SSR1-208ENST00000483409 AP1S3Q96PC3 154 aa9.15□□□□□ -0.94
SSR1-208ENST00000483409 C9JQL5 133 aa9.14□□□□□ -0.95
SSR1-208ENST00000483409 LINC00694P0DN24 101 aa9.14□□□□□ -0.95
SSR1-208ENST00000483409 TIRAPP58753 221 aa9.14□□□□□ -0.95
SSR1-208ENST00000483409 SRSF3P84103 164 aaKnown RBP9.14□□□□□ -0.95
SSR1-208ENST00000483409 LYZL1Q6UWQ5 148 aa9.14□□□□□ -0.95
SSR1-208ENST00000483409 MSRB1Q9NZV6 116 aa9.14□□□□□ -0.95
SSR1-208ENST00000483409 LY96Q9Y6Y9 160 aa9.14□□□□□ -0.95
SSR1-208ENST00000483409 A0A1W2PPQ1 181 aa9.13□□□□□ -0.95
SSR1-208ENST00000483409 F5H697 171 aa9.13□□□□□ -0.95
SSR1-208ENST00000483409 GATCO43716 136 aaKnown RBP9.13□□□□□ -0.95
SSR1-208ENST00000483409 SMIM17P0DL12 118 aa9.13□□□□□ -0.95
SSR1-208ENST00000483409 ERVFC1-1P60608 527 aa9.13□□□□□ -0.95
SSR1-208ENST00000483409 RAB4BP61018 213 aa9.13□□□□□ -0.95
SSR1-208ENST00000483409 CACNG7P62955 275 aa9.13□□□□□ -0.95
SSR1-208ENST00000483409 LINC01551Q86U37 167 aa9.13□□□□□ -0.95
SSR1-208ENST00000483409 GTSF1LQ9H1H1 148 aa9.13□□□□□ -0.95
SSR1-208ENST00000483409 HECTD4Q9Y4D8 3996 aa9.13□□□□□ -0.95
SSR1-208ENST00000483409 F2Z2F3 143 aa9.12□□□□□ -0.95
SSR1-208ENST00000483409 CTRLP40313 264 aa9.12□□□□□ -0.95
SSR1-208ENST00000483409 PEA15Q15121 130 aa9.12□□□□□ -0.95
SSR1-208ENST00000483409 OR10J3Q5JRS4 329 aa9.12□□□□□ -0.95
SSR1-208ENST00000483409 FAM231DQ6ZW35 169 aa9.12□□□□□ -0.95
SSR1-208ENST00000483409 KIF25-AS1Q9Y6Z4 181 aa9.12□□□□□ -0.95
SSR1-208ENST00000483409 TRAV8-6A0A0B4J262 113 aa9.11□□□□□ -0.95
SSR1-208ENST00000483409 TRBV10-1A0A0K0K1A3 114 aa9.11□□□□□ -0.95
SSR1-208ENST00000483409 MGPP08493 103 aa9.11□□□□□ -0.95
SSR1-208ENST00000483409 DNAH10OSP0CZ25 163 aa9.11□□□□□ -0.95
SSR1-208ENST00000483409 NTF3P20783 257 aa9.11□□□□□ -0.95
SSR1-208ENST00000483409 LINC00315P59091 139 aa9.11□□□□□ -0.95
SSR1-208ENST00000483409 LELP1Q5T871 98 aa9.11□□□□□ -0.95
SSR1-208ENST00000483409 GTSF1Q8WW33 167 aa9.11□□□□□ -0.95
SSR1-208ENST00000483409 IGHV3-38A0A0C4DH36 116 aa9.1□□□□□ -0.95
SSR1-208ENST00000483409 A0A1B0GVY2 172 aa9.1□□□□□ -0.95
SSR1-208ENST00000483409 EVI2AP22794 236 aa9.1□□□□□ -0.95
SSR1-208ENST00000483409 RPL36AP83881 106 aaKnown RBP9.1□□□□□ -0.95
SSR1-208ENST00000483409 NEXN-AS1Q8NBZ9 246 aa9.1□□□□□ -0.95
SSR1-208ENST00000483409 RPL36ALQ969Q0 106 aaKnown RBP9.1□□□□□ -0.95
SSR1-208ENST00000483409 BIRC6Q9NR09 4857 aa9.1□□□□□ -0.95
SSR1-208ENST00000483409 TRBV7-3A0A075B6L6 115 aa9.09□□□□□ -0.95
SSR1-208ENST00000483409 TRAV9-2A0A087WT02 112 aa9.09□□□□□ -0.95
SSR1-208ENST00000483409 A8MWL6 223 aa9.09□□□□□ -0.95
SSR1-208ENST00000483409 TRGC1P0CF51 173 aa9.09□□□□□ -0.95
SSR1-208ENST00000483409 RAB14P61106 215 aa9.09□□□□□ -0.95
SSR1-208ENST00000483409 TNP2Q05952 138 aa9.09□□□□□ -0.95
SSR1-208ENST00000483409 TWIST1Q15672 202 aa9.09□□□□□ -0.95
SSR1-208ENST00000483409 TMEM241Q24JQ0 296 aa9.09□□□□□ -0.95
SSR1-208ENST00000483409 FAM74A3Q4VXF1 159 aa9.09□□□□□ -0.95
SSR1-208ENST00000483409 TNFRSF18Q9Y5U5 241 aa9.09□□□□□ -0.95
SSR1-208ENST00000483409 UBE2D3P61077 147 aa9.08□□□□□ -0.96
SSR1-208ENST00000483409 RPL23P62829 140 aaKnown RBP9.08□□□□□ -0.96
SSR1-208ENST00000483409 UBE2D2P62837 147 aa9.08□□□□□ -0.96
SSR1-208ENST00000483409 ADIRFQ15847 76 aa9.08□□□□□ -0.96
SSR1-208ENST00000483409 CT83Q5H943 113 aa9.08□□□□□ -0.96
SSR1-208ENST00000483409 LINC01556Q5JQF7 62 aa9.08□□□□□ -0.96
SSR1-208ENST00000483409 WDR73Q6P4I2 378 aa9.08□□□□□ -0.96
SSR1-208ENST00000483409 OR10G8Q8NGN5 311 aa9.08□□□□□ -0.96
SSR1-208ENST00000483409 ISOC2Q96AB3 205 aa9.08□□□□□ -0.96
SSR1-208ENST00000483409 PGLYRP4Q96LB8 373 aa9.08□□□□□ -0.96
SSR1-208ENST00000483409 CNFNQ9BYD5 112 aa9.08□□□□□ -0.96
SSR1-208ENST00000483409 SMDT1Q9H4I9 107 aa9.08□□□□□ -0.96
SSR1-208ENST00000483409 OSTCQ9NRP0 149 aa9.08□□□□□ -0.96
SSR1-208ENST00000483409 NAT8Q9UHE5 227 aa9.08□□□□□ -0.96
SSR1-208ENST00000483409 PKD1P98161 4303 aa9.07□□□□□ -0.96
SSR1-208ENST00000483409 PKHD1P08F94 4074 aa9.07□□□□□ -0.96
SSR1-208ENST00000483409 IGHV3-30P01768 117 aa9.07□□□□□ -0.96
SSR1-208ENST00000483409 IGHV3-33P01772 117 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 225.2 ms