RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 CST9LP1Q5W188 147 aa10.17□□□□□ -0.78
LIMS3-203ENST00000480744 EIF5AL1Q6IS14 154 aaKnown RBP10.17□□□□□ -0.78
LIMS3-203ENST00000480744 ALKAL2Q6UX46 152 aa10.17□□□□□ -0.78
LIMS3-203ENST00000480744 TM2D2Q9BX73 214 aa10.17□□□□□ -0.78
LIMS3-203ENST00000480744 SAMD10Q9BYL1 202 aa10.17□□□□□ -0.78
LIMS3-203ENST00000480744 TRAV1-1A0A0B4J248 108 aa10.16□□□□□ -0.78
LIMS3-203ENST00000480744 GRIFINA4D1Z8 144 aa10.16□□□□□ -0.78
LIMS3-203ENST00000480744 LAGE3Q14657 143 aa10.16□□□□□ -0.78
LIMS3-203ENST00000480744 C14orf178Q8N769 122 aaPredicted RBP10.16□□□□□ -0.78
LIMS3-203ENST00000480744 SYT8Q8NBV8 401 aa10.16□□□□□ -0.78
LIMS3-203ENST00000480744 HIST1H2BAQ96A08 127 aa10.16□□□□□ -0.78
LIMS3-203ENST00000480744 ZC2HC1AQ96GY0 325 aa10.16□□□□□ -0.78
LIMS3-203ENST00000480744 NKX6-2Q9C056 277 aaPredicted RBP10.16□□□□□ -0.78
LIMS3-203ENST00000480744 IL36BQ9NZH7 164 aa10.16□□□□□ -0.78
LIMS3-203ENST00000480744 VPS13BQ7Z7G8 4022 aa10.16□□□□□ -0.78
LIMS3-203ENST00000480744 SCO2A0A1W2PP80 73 aa10.15□□□□□ -0.78
LIMS3-203ENST00000480744 FAM229AH3BQW9 127 aa10.15□□□□□ -0.78
LIMS3-203ENST00000480744 SH2D1AO60880 128 aa10.15□□□□□ -0.78
LIMS3-203ENST00000480744 ARMS2P0C7Q2 107 aa10.15□□□□□ -0.78
LIMS3-203ENST00000480744 LINC00694P0DN24 101 aa10.15□□□□□ -0.78
LIMS3-203ENST00000480744 UBE2G1P62253 170 aa10.15□□□□□ -0.78
LIMS3-203ENST00000480744 PIK3CD-AS1Q5SR53 167 aa10.15□□□□□ -0.78
LIMS3-203ENST00000480744 FAM74A4Q5TZK3 123 aa10.15□□□□□ -0.78
LIMS3-203ENST00000480744 DMRTA1Q5VZB9 504 aa10.15□□□□□ -0.78
LIMS3-203ENST00000480744 TMEM70Q9BUB7 260 aa10.15□□□□□ -0.78
LIMS3-203ENST00000480744 GNG13Q9P2W3 67 aa10.15□□□□□ -0.78
LIMS3-203ENST00000480744 Q9UF83 564 aa10.15□□□□□ -0.78
LIMS3-203ENST00000480744 TMSB15BA0A087X1C1 80 aa10.14□□□□□ -0.79
LIMS3-203ENST00000480744 KRBOX1C9JBD0 128 aa10.14□□□□□ -0.79
LIMS3-203ENST00000480744 RHODO00212 210 aa10.14□□□□□ -0.79
LIMS3-203ENST00000480744 LECT2O14960 151 aa10.14□□□□□ -0.79
LIMS3-203ENST00000480744 CRIP1P50238 77 aa10.14□□□□□ -0.79
LIMS3-203ENST00000480744 DAZ4Q86SG3 579 aaKnown RBP10.14□□□□□ -0.79
LIMS3-203ENST00000480744 DAZ3Q9NR90 486 aaKnown RBP10.14□□□□□ -0.79
LIMS3-203ENST00000480744 DMBT1Q9UGM3 2413 aaPredicted RBP10.14□□□□□ -0.79
LIMS3-203ENST00000480744 A0A087WWC5 75 aa10.13□□□□□ -0.79
LIMS3-203ENST00000480744 TRAV8-3A0A0A6YYJ7 113 aa10.13□□□□□ -0.79
LIMS3-203ENST00000480744 WFDC2Q14508 124 aa10.13□□□□□ -0.79
LIMS3-203ENST00000480744 TOR2AQ5JU69 321 aa10.13□□□□□ -0.79
LIMS3-203ENST00000480744 FAM162BQ5T6X4 162 aa10.13□□□□□ -0.79
LIMS3-203ENST00000480744 UFSP1Q6NVU6 142 aa10.13□□□□□ -0.79
LIMS3-203ENST00000480744 FMC1Q96HJ9 113 aa10.13□□□□□ -0.79
LIMS3-203ENST00000480744 ZFP30Q9Y2G7 519 aa10.13□□□□□ -0.79
LIMS3-203ENST00000480744 PHLDA3Q9Y5J5 127 aa10.13□□□□□ -0.79
LIMS3-203ENST00000480744 HERC1Q15751 4861 aa10.13□□□□□ -0.79
LIMS3-203ENST00000480744 A0A087WWL8 130 aa10.12□□□□□ -0.79
LIMS3-203ENST00000480744 M0R381 172 aa10.12□□□□□ -0.79
LIMS3-203ENST00000480744 TCEAL7Q9BRU2 100 aa10.12□□□□□ -0.79
LIMS3-203ENST00000480744 MANBALQ9NQG1 85 aa10.12□□□□□ -0.79
LIMS3-203ENST00000480744 URGCP-MRPS24S4R325 110 aa10.12□□□□□ -0.79
LIMS3-203ENST00000480744 FLG2Q5D862 2391 aaPredicted RBP10.12□□□□□ -0.79
LIMS3-203ENST00000480744 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
LIMS3-203ENST00000480744 AKR1C3P42330 323 aa10.11□□□□□ -0.79
LIMS3-203ENST00000480744 DNLZQ5SXM8 178 aa10.11□□□□□ -0.79
LIMS3-203ENST00000480744 FAM30AQ9NZY2 134 aa10.11□□□□□ -0.79
LIMS3-203ENST00000480744 TRBV6-1A0A0K0K1D8 114 aa10.1□□□□□ -0.79
LIMS3-203ENST00000480744 LTAP01374 205 aa10.1□□□□□ -0.79
LIMS3-203ENST00000480744 SFRP2Q96HF1 295 aa10.1□□□□□ -0.79
LIMS3-203ENST00000480744 DERL1Q9BUN8 251 aa10.1□□□□□ -0.79
LIMS3-203ENST00000480744 SRRM2Q9UQ35 2752 aaKnown RBP10.1□□□□□ -0.79
LIMS3-203ENST00000480744 DNAH8Q96JB1 4490 aa10.1□□□□□ -0.79
LIMS3-203ENST00000480744 ZNF674Q2M3X9 581 aa10.09□□□□□ -0.79
LIMS3-203ENST00000480744 LINC01559Q495D7 138 aa10.09□□□□□ -0.79
LIMS3-203ENST00000480744 COX8CQ7Z4L0 72 aa10.09□□□□□ -0.79
LIMS3-203ENST00000480744 ZFP82Q8N141 532 aa10.09□□□□□ -0.79
LIMS3-203ENST00000480744 BAALCQ8WXS3 180 aa10.09□□□□□ -0.79
LIMS3-203ENST00000480744 C11orf52Q96A22 123 aa10.09□□□□□ -0.79
LIMS3-203ENST00000480744 RMI2Q96E14 147 aa10.09□□□□□ -0.79
LIMS3-203ENST00000480744 BCL2P10415 239 aa10.08□□□□□ -0.8
LIMS3-203ENST00000480744 NIT1Q86X76 327 aa10.08□□□□□ -0.8
LIMS3-203ENST00000480744 LYPD6BQ8NI32 183 aa10.08□□□□□ -0.8
LIMS3-203ENST00000480744 KLK12Q9UKR0 248 aa10.08□□□□□ -0.8
LIMS3-203ENST00000480744 COX11Q9Y6N1 276 aa10.08□□□□□ -0.8
LIMS3-203ENST00000480744 IGKV2D-24A0A075B6R9 120 aa10.07□□□□□ -0.8
LIMS3-203ENST00000480744 TEX46H3BTG2 121 aa10.07□□□□□ -0.8
LIMS3-203ENST00000480744 RPL36AP83881 106 aaKnown RBP10.07□□□□□ -0.8
LIMS3-203ENST00000480744 MEF2BQ02080 365 aaPredicted RBP10.07□□□□□ -0.8
LIMS3-203ENST00000480744 KCNIP4Q6PIL6 250 aa10.07□□□□□ -0.8
LIMS3-203ENST00000480744 RPL36ALQ969Q0 106 aaKnown RBP10.07□□□□□ -0.8
LIMS3-203ENST00000480744 DNAJC30Q96LL9 226 aa10.07□□□□□ -0.8
LIMS3-203ENST00000480744 MLST8Q9BVC4 326 aa10.07□□□□□ -0.8
LIMS3-203ENST00000480744 A0A087WX48 190 aa10.06□□□□□ -0.8
LIMS3-203ENST00000480744 RPL35P42766 123 aaKnown RBP10.06□□□□□ -0.8
LIMS3-203ENST00000480744 LINC01620Q4KN68 170 aa10.06□□□□□ -0.8
LIMS3-203ENST00000480744 UBE2WQ96B02 151 aa10.06□□□□□ -0.8
LIMS3-203ENST00000480744 MYCBP2O75592 4640 aa10.06□□□□□ -0.8
LIMS3-203ENST00000480744 TRBV10-1A0A0K0K1A3 114 aa10.05□□□□□ -0.8
LIMS3-203ENST00000480744 RBFOX3A6NFN3 312 aa10.05□□□□□ -0.8
LIMS3-203ENST00000480744 IFNA1P01562 189 aa10.05□□□□□ -0.8
LIMS3-203ENST00000480744 BLOC1S1P78537 153 aa10.05□□□□□ -0.8
LIMS3-203ENST00000480744 RPL19P84098 196 aaKnown RBP10.05□□□□□ -0.8
LIMS3-203ENST00000480744 ZNF56Q15929 161 aa10.05□□□□□ -0.8
LIMS3-203ENST00000480744 VAX2Q9UIW0 290 aa10.05□□□□□ -0.8
LIMS3-203ENST00000480744 TRBV20OR9-2A0A075B6H5 130 aa10.04□□□□□ -0.8
LIMS3-203ENST00000480744 TRBV7-3A0A075B6L6 115 aa10.04□□□□□ -0.8
LIMS3-203ENST00000480744 IGLV2-8P01709 118 aa10.04□□□□□ -0.8
LIMS3-203ENST00000480744 UBE2D3P61077 147 aa10.04□□□□□ -0.8
LIMS3-203ENST00000480744 UBE2D2P62837 147 aa10.04□□□□□ -0.8
LIMS3-203ENST00000480744 ELOBQ15370 118 aa10.04□□□□□ -0.8
LIMS3-203ENST00000480744 RAB19A4D1S5 217 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms