RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 APRG1Q8IVJ8 170 aa8□□□□□ -1.13
SIK3-210ENST00000480468 LINC00526Q96FQ7 95 aa8□□□□□ -1.13
SIK3-210ENST00000480468 BEX4Q9NWD9 120 aaPredicted RBP8□□□□□ -1.13
SIK3-210ENST00000480468 Q9UFV3 132 aa8□□□□□ -1.13
SIK3-210ENST00000480468 TRGV11A0A075B6L2 103 aa7.99□□□□□ -1.13
SIK3-210ENST00000480468 FAM236AA0A1B0GUQ0 79 aa7.99□□□□□ -1.13
SIK3-210ENST00000480468 FAM236BA0A1B0GV22 79 aa7.99□□□□□ -1.13
SIK3-210ENST00000480468 RNASE3P12724 160 aaKnown RBP7.99□□□□□ -1.13
SIK3-210ENST00000480468 ZNF22P17026 224 aaPredicted RBP7.99□□□□□ -1.13
SIK3-210ENST00000480468 TNRC18O15417 2968 aaPredicted RBP7.99□□□□□ -1.13
SIK3-210ENST00000480468 IGHV3-66A0A0C4DH42 116 aa7.99□□□□□ -1.13
SIK3-210ENST00000480468 OVOL1O14753 267 aa7.99□□□□□ -1.13
SIK3-210ENST00000480468 LINC00694P0DN24 101 aa7.99□□□□□ -1.13
SIK3-210ENST00000480468 RHOHQ15669 191 aa7.99□□□□□ -1.13
SIK3-210ENST00000480468 NSUN5P1Q3KNT7 163 aa7.99□□□□□ -1.13
SIK3-210ENST00000480468 C9orf153Q5TBE3 101 aa7.99□□□□□ -1.13
SIK3-210ENST00000480468 C16orf92Q96LL3 132 aa7.99□□□□□ -1.13
SIK3-210ENST00000480468 DUX3Q96PT4 197 aa7.99□□□□□ -1.13
SIK3-210ENST00000480468 LITAFQ99732 161 aa7.99□□□□□ -1.13
SIK3-210ENST00000480468 IGHV7-81A0A0B4J1V7 117 aa7.98□□□□□ -1.13
SIK3-210ENST00000480468 OOSP1A8MZH6 123 aa7.98□□□□□ -1.13
SIK3-210ENST00000480468 UBE2E1P51965 193 aa7.98□□□□□ -1.13
SIK3-210ENST00000480468 LPAL2Q16609 132 aa7.98□□□□□ -1.13
SIK3-210ENST00000480468 SUMO4Q6EEV6 95 aa7.98□□□□□ -1.13
SIK3-210ENST00000480468 FAM19A4Q96LR4 140 aa7.98□□□□□ -1.13
SIK3-210ENST00000480468 CFAP47Q6ZTR5 3102 aa7.98□□□□□ -1.13
SIK3-210ENST00000480468 J3KRW8 73 aa7.98□□□□□ -1.13
SIK3-210ENST00000480468 J3KT08 172 aa7.98□□□□□ -1.13
SIK3-210ENST00000480468 IGF1P05019 195 aa7.98□□□□□ -1.13
SIK3-210ENST00000480468 LINC00643Q86TS7 51 aa7.98□□□□□ -1.13
SIK3-210ENST00000480468 TECTAO75443 2155 aa7.97□□□□□ -1.13
SIK3-210ENST00000480468 PKDREJQ9NTG1 2253 aa7.97□□□□□ -1.13
SIK3-210ENST00000480468 WNK2Q9Y3S1 2297 aa7.97□□□□□ -1.13
SIK3-210ENST00000480468 NPFFO15130 113 aa7.97□□□□□ -1.13
SIK3-210ENST00000480468 SPRY2O43597 315 aa7.97□□□□□ -1.13
SIK3-210ENST00000480468 CCDC140Q96MF4 163 aa7.97□□□□□ -1.13
SIK3-210ENST00000480468 KALRNO60229 2985 aa7.97□□□□□ -1.13
SIK3-210ENST00000480468 M0R1W7 72 aa7.97□□□□□ -1.13
SIK3-210ENST00000480468 RPS28P62857 69 aaKnown RBP7.97□□□□□ -1.13
SIK3-210ENST00000480468 SDIM1Q6ZPB5 146 aa7.97□□□□□ -1.13
SIK3-210ENST00000480468 C3orf56Q8N813 242 aa7.97□□□□□ -1.13
SIK3-210ENST00000480468 C20orf173Q96LM9 149 aa7.97□□□□□ -1.13
SIK3-210ENST00000480468 ARRDC1-AS1Q9H2J1 176 aa7.97□□□□□ -1.13
SIK3-210ENST00000480468 E7EQL1 145 aa7.96□□□□□ -1.14
SIK3-210ENST00000480468 CXCL5P42830 114 aa7.96□□□□□ -1.14
SIK3-210ENST00000480468 HERVK_113P63121 156 aa7.96□□□□□ -1.14
SIK3-210ENST00000480468 SPXQ9BT56 116 aa7.96□□□□□ -1.14
SIK3-210ENST00000480468 ZNF256Q9Y2P7 627 aaPredicted RBP7.96□□□□□ -1.14
SIK3-210ENST00000480468 CUL9Q8IWT3 2517 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 DMDP11532 3685 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 IGHV3OR16-13A0A075B7E8 117 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 TRBV7-1A0A0A6YYK4 115 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 IGHV3-74A0A0B4J1X5 117 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 B9A039 149 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 CDX4O14627 284 aaPredicted RBP7.95□□□□□ -1.14
SIK3-210ENST00000480468 WIPF1O43516 503 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 RNASE4P34096 147 aaKnown RBP7.95□□□□□ -1.14
SIK3-210ENST00000480468 MIAQ16674 131 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 EEF1AKMT3Q96AZ1 226 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 SMIM9A6NGZ8 99 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 GNRH2O43555 120 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 IGFL3Q6UXB1 125 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 CLEC19AQ6UXS0 136 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 DCANP1Q8TF63 244 aa7.95□□□□□ -1.14
SIK3-210ENST00000480468 I3L3M4 83 aa7.94□□□□□ -1.14
SIK3-210ENST00000480468 IGHV3-30-3P0DP02 117 aa7.94□□□□□ -1.14
SIK3-210ENST00000480468 TMEM61Q8N0U2 210 aa7.94□□□□□ -1.14
SIK3-210ENST00000480468 Q8N9W7 124 aa7.94□□□□□ -1.14
SIK3-210ENST00000480468 CLEC2BQ92478 149 aa7.94□□□□□ -1.14
SIK3-210ENST00000480468 TPRP12270 2363 aaKnown RBP7.94□□□□□ -1.14
SIK3-210ENST00000480468 MUC4Q99102 2169 aa7.94□□□□□ -1.14
SIK3-210ENST00000480468 SOCS3O14543 225 aa7.94□□□□□ -1.14
SIK3-210ENST00000480468 MINOS1Q5TGZ0 78 aa7.94□□□□□ -1.14
SIK3-210ENST00000480468 CEMP1Q6PRD7 247 aaPredicted RBP7.94□□□□□ -1.14
SIK3-210ENST00000480468 TMEM219Q86XT9 240 aa7.94□□□□□ -1.14
SIK3-210ENST00000480468 C20orf203Q8NBC4 194 aa7.94□□□□□ -1.14
SIK3-210ENST00000480468 TIMM21Q9BVV7 248 aa7.94□□□□□ -1.14
SIK3-210ENST00000480468 MINOS1-NBL1R4GNA1 71 aa7.94□□□□□ -1.14
SIK3-210ENST00000480468 IGHV3-49A0A0A0MS15 119 aa7.93□□□□□ -1.14
SIK3-210ENST00000480468 A0A0J9YXV3 536 aa7.93□□□□□ -1.14
SIK3-210ENST00000480468 TIMM17BO60830 172 aa7.93□□□□□ -1.14
SIK3-210ENST00000480468 CRYGAP11844 174 aa7.93□□□□□ -1.14
SIK3-210ENST00000480468 COX7CP15954 63 aa7.93□□□□□ -1.14
SIK3-210ENST00000480468 ATP5J2P56134 94 aa7.93□□□□□ -1.14
SIK3-210ENST00000480468 VMO1Q7Z5L0 202 aa7.93□□□□□ -1.14
SIK3-210ENST00000480468 C5orf38Q86SI9 138 aa7.93□□□□□ -1.14
SIK3-210ENST00000480468 RP1L1Q8IWN7 2480 aaPredicted RBP7.93□□□□□ -1.14
SIK3-210ENST00000480468 ARHGAP32A7KAX9 2087 aa7.93□□□□□ -1.14
SIK3-210ENST00000480468 PRSS2P07478 247 aa7.93□□□□□ -1.14
SIK3-210ENST00000480468 ZDBF2Q9HCK1 2354 aa7.92□□□□□ -1.14
SIK3-210ENST00000480468 IGLV4-3A0A075B6K6 122 aa7.92□□□□□ -1.14
SIK3-210ENST00000480468 IGHV3-64A0A075B6Q5 118 aa7.92□□□□□ -1.14
SIK3-210ENST00000480468 F5H697 171 aa7.92□□□□□ -1.14
SIK3-210ENST00000480468 LYNX1G3V0Z9 82 aa7.92□□□□□ -1.14
SIK3-210ENST00000480468 LYNX1P0DP58 116 aa7.92□□□□□ -1.14
SIK3-210ENST00000480468 DEFB109BQ30KR1 87 aa7.92□□□□□ -1.14
SIK3-210ENST00000480468 OPRPNQ99935 248 aaPredicted RBP7.92□□□□□ -1.14
SIK3-210ENST00000480468 IGHV1-58A0A0C4DH39 117 aa7.91□□□□□ -1.14
SIK3-210ENST00000480468 MRPS36P82909 103 aaKnown RBP7.91□□□□□ -1.14
SIK3-210ENST00000480468 ECSCRQ19T08 205 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 1038.8 ms