RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 GAGE12JA6NER3 117 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 GAGE1Q13065 139 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 GAGE4Q13068 117 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 GAGE5Q13069 117 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 GAGE13Q4V321 117 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 MUC21A0A0G2JKD1 596 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 MUC21A0A140T8X8 626 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 CRYBA4P53673 196 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 ERCC8Q13216 396 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 F6UB75 175 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 SYS1-DBNDD2H3BUS1 97 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 APOMO95445 188 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 HLA-DMBP28068 263 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 UNQ9165/PRO28630Q6UXU0 137 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 OR5A1Q8NGJ0 315 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 TOMM7Q9P0U1 55 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 CSDC2Q9Y534 153 aaKnown RBP4.52□□□□□ -1.69
CPS1-207ENST00000479988 CDH23Q9H251 3354 aa4.52□□□□□ -1.69
CPS1-207ENST00000479988 TRAV2A0A0B4J234 112 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 A6NDN8 102 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 WIPF1O43516 503 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 FRMD6-AS1P0C7T7 363 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 C17orf77Q96MU5 243 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 UNC80Q8N2C7 3258 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 IGSF10Q6WRI0 2623 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 CRXO43186 299 aaPredicted RBP4.51□□□□□ -1.69
CPS1-207ENST00000479988 IFI27P40305 119 aaPredicted RBP4.51□□□□□ -1.69
CPS1-207ENST00000479988 MRGPRG-AS1Q2M3A8 158 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 HIST2H2BDQ6DRA6 164 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 UNC79Q9P2D8 2635 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 TRBV25-1A0A075B6N4 114 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 M0R2P5 195 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 PRB4P10163 310 aaPredicted RBP4.51□□□□□ -1.69
CPS1-207ENST00000479988 HINT1P49773 126 aaPredicted RBP4.51□□□□□ -1.69
CPS1-207ENST00000479988 Q6ZS46 218 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 C8orf49Q96NF6 230 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 Q9HAA7 133 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 MRPS16Q9Y3D3 137 aaKnown RBP4.51□□□□□ -1.69
CPS1-207ENST00000479988 D6R8Y8 96 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 G3V4G9 280 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 H3BRM9 83 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 IFI27L1Q96BM0 104 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 U3KQE9 123 aa4.51□□□□□ -1.69
CPS1-207ENST00000479988 A0A087WWL8 130 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 A0A096LPF7 62 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 TMEM213A2RRL7 107 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 IGLV1-40P01703 118 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 ORMDL2Q53FV1 153 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 NEGR1Q7Z3B1 354 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 MRPL16Q9NX20 251 aaKnown RBP4.5□□□□□ -1.69
CPS1-207ENST00000479988 IGHV3-16A0A0C4DH30 117 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 BRI3O95415 125 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 SS18Q15532 418 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 ASPHD1Q5U4P2 390 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 GTSF1Q8WW33 167 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 IGKV2D-24A0A075B6R9 120 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.5□□□□□ -1.69
CPS1-207ENST00000479988 NUPR1O60356 82 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 HLA-DRB4P13762 266 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 MEIG1Q5JSS6 88 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 SERTAD4-AS1Q5TG53 156 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 MRAP2Q96G30 205 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 ZNF580Q9UK33 172 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 HLA-DRB4X5D2U9 266 aa4.5□□□□□ -1.69
CPS1-207ENST00000479988 LYRM9A8MSI8 78 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 CTRLP40313 264 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 CRIP2P52943 208 aaPredicted RBP4.49□□□□□ -1.69
CPS1-207ENST00000479988 C9orf47Q6ZRZ4 202 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 C10orf126Q8N4M7 172 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 PRUNE2Q8WUY3 3088 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 STAB1Q9NY15 2570 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 AMN1Q8IY45 258 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 ATOH7Q8N100 152 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 AGPAT4-IT1Q9H0P7 198 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 P0DMU3 169 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 FAM231AP0DMU4 169 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 FAM231CP0DMU5 169 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 IGLC3P0DOY3 106 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 CIRBPQ14011 172 aaKnown RBP4.49□□□□□ -1.69
CPS1-207ENST00000479988 C18orf65Q6ZTR6 163 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 COX8CQ7Z4L0 72 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 NACAE9PAV3 2078 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 USP17L23D6RBM5 183 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 K7EMI3 77 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 MRPL51Q4U2R6 128 aaKnown RBP4.49□□□□□ -1.69
CPS1-207ENST00000479988 PHLDA1Q8WV24 401 aaPredicted RBP4.49□□□□□ -1.69
CPS1-207ENST00000479988 PTH2Q96A98 100 aa4.49□□□□□ -1.69
CPS1-207ENST00000479988 EGR2P11161 476 aaPredicted RBP4.48□□□□□ -1.69
CPS1-207ENST00000479988 GYPEP15421 78 aa4.48□□□□□ -1.69
CPS1-207ENST00000479988 RBX1P62877 108 aa4.48□□□□□ -1.69
CPS1-207ENST00000479988 LGALS9BQ3B8N2 356 aa4.48□□□□□ -1.69
CPS1-207ENST00000479988 ANXA2RQ3ZCQ2 193 aa4.48□□□□□ -1.69
CPS1-207ENST00000479988 LGALS9CQ6DKI2 356 aa4.48□□□□□ -1.69
CPS1-207ENST00000479988 TMEM263Q8WUH6 116 aaKnown RBP4.48□□□□□ -1.69
CPS1-207ENST00000479988 IGHV1-24A0A0C4DH33 117 aa4.48□□□□□ -1.69
CPS1-207ENST00000479988 K7EQG2 157 aa4.48□□□□□ -1.69
CPS1-207ENST00000479988 DLEU1O43261 78 aa4.48□□□□□ -1.69
CPS1-207ENST00000479988 IGLV1-51P01701 117 aa4.48□□□□□ -1.69
CPS1-207ENST00000479988 ANGP03950 147 aaKnown RBP4.48□□□□□ -1.69
CPS1-207ENST00000479988 FAM222AQ5U5X8 452 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms