RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 C16orf90A8MZG2 172 aa12.62□□□□□ -0.39
SREBF1-212ENST00000478616 SH2D6Q7Z4S9 175 aa12.62□□□□□ -0.39
SREBF1-212ENST00000478616 OR10AG1Q8NH19 301 aa12.62□□□□□ -0.39
SREBF1-212ENST00000478616 MANBALQ9NQG1 85 aa12.62□□□□□ -0.39
SREBF1-212ENST00000478616 GAGE12JA6NER3 117 aa12.61□□□□□ -0.39
SREBF1-212ENST00000478616 M0R381 172 aa12.61□□□□□ -0.39
SREBF1-212ENST00000478616 SNAI2O43623 268 aa12.61□□□□□ -0.39
SREBF1-212ENST00000478616 CXCL1P09341 107 aa12.61□□□□□ -0.39
SREBF1-212ENST00000478616 GAGE1Q13065 139 aa12.61□□□□□ -0.39
SREBF1-212ENST00000478616 GAGE4Q13068 117 aa12.61□□□□□ -0.39
SREBF1-212ENST00000478616 GAGE5Q13069 117 aa12.61□□□□□ -0.39
SREBF1-212ENST00000478616 GAGE13Q4V321 117 aa12.61□□□□□ -0.39
SREBF1-212ENST00000478616 LINC01556Q5JQF7 62 aa12.61□□□□□ -0.39
SREBF1-212ENST00000478616 ATP6V0E2Q8NHE4 81 aa12.61□□□□□ -0.39
SREBF1-212ENST00000478616 GTSF1LQ9H1H1 148 aa12.61□□□□□ -0.39
SREBF1-212ENST00000478616 IGHV3-38A0A0C4DH36 116 aa12.6□□□□□ -0.39
SREBF1-212ENST00000478616 RAB19A4D1S5 217 aa12.6□□□□□ -0.39
SREBF1-212ENST00000478616 LELP1Q5T871 98 aa12.6□□□□□ -0.39
SREBF1-212ENST00000478616 MSRB1Q9NZV6 116 aa12.6□□□□□ -0.39
SREBF1-212ENST00000478616 PHLDA3Q9Y5J5 127 aa12.6□□□□□ -0.39
SREBF1-212ENST00000478616 CENPWQ5EE01 88 aa12.59□□□□□ -0.39
SREBF1-212ENST00000478616 PRR27Q6MZM9 219 aa12.59□□□□□ -0.39
SREBF1-212ENST00000478616 MUC21A0A0G2JKD1 596 aa12.58□□□□□ -0.4
SREBF1-212ENST00000478616 MUC21A0A140T8X8 626 aa12.58□□□□□ -0.4
SREBF1-212ENST00000478616 C19orf71A6NCJ1 209 aa12.58□□□□□ -0.4
SREBF1-212ENST00000478616 TEX46H3BTG2 121 aa12.58□□□□□ -0.4
SREBF1-212ENST00000478616 EVI2AP22794 236 aa12.58□□□□□ -0.4
SREBF1-212ENST00000478616 BLOC1S1P78537 153 aa12.58□□□□□ -0.4
SREBF1-212ENST00000478616 MEF2BQ02080 365 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-212ENST00000478616 FAM74A4Q5TZK3 123 aa12.58□□□□□ -0.4
SREBF1-212ENST00000478616 TEX261Q6UWH6 196 aa12.58□□□□□ -0.4
SREBF1-212ENST00000478616 ZFP82Q8N141 532 aa12.58□□□□□ -0.4
SREBF1-212ENST00000478616 SYT8Q8NBV8 401 aa12.58□□□□□ -0.4
SREBF1-212ENST00000478616 A0A087WTM6 91 aa12.57□□□□□ -0.4
SREBF1-212ENST00000478616 IBA57-AS1B1ANH7 110 aa12.57□□□□□ -0.4
SREBF1-212ENST00000478616 K7EP13 123 aa12.57□□□□□ -0.4
SREBF1-212ENST00000478616 BCL2P10415 239 aa12.57□□□□□ -0.4
SREBF1-212ENST00000478616 KIF25-AS1Q9Y6Z4 181 aa12.57□□□□□ -0.4
SREBF1-212ENST00000478616 FAT1Q14517 4588 aa12.57□□□□□ -0.4
SREBF1-212ENST00000478616 RHODO00212 210 aa12.56□□□□□ -0.4
SREBF1-212ENST00000478616 OR5AL1P0C617 328 aa12.56□□□□□ -0.4
SREBF1-212ENST00000478616 GZMBP10144 247 aa12.56□□□□□ -0.4
SREBF1-212ENST00000478616 OR10J3Q5JRS4 329 aa12.56□□□□□ -0.4
SREBF1-212ENST00000478616 TRAV9-2A0A087WT02 112 aa12.55□□□□□ -0.4
SREBF1-212ENST00000478616 LRCOL1A6NCL2 159 aa12.55□□□□□ -0.4
SREBF1-212ENST00000478616 CDK2AP2O75956 126 aa12.55□□□□□ -0.4
SREBF1-212ENST00000478616 IGHV3-30P01768 117 aa12.55□□□□□ -0.4
SREBF1-212ENST00000478616 IGHV3-33P01772 117 aa12.55□□□□□ -0.4
SREBF1-212ENST00000478616 IGLC6P0CF74 106 aa12.55□□□□□ -0.4
SREBF1-212ENST00000478616 IGHV3-30-3P0DP02 117 aa12.55□□□□□ -0.4
SREBF1-212ENST00000478616 IGHV3-30-5P0DP03 117 aa12.55□□□□□ -0.4
SREBF1-212ENST00000478616 LYPD6BQ8NI32 183 aa12.55□□□□□ -0.4
SREBF1-212ENST00000478616 NFE4Q86UQ8 179 aa12.54□□□□□ -0.4
SREBF1-212ENST00000478616 TRAV8-6A0A0B4J262 113 aa12.53□□□□□ -0.4
SREBF1-212ENST00000478616 RBFOX3A6NFN3 312 aa12.53□□□□□ -0.4
SREBF1-212ENST00000478616 UBE2D3P61077 147 aa12.53□□□□□ -0.4
SREBF1-212ENST00000478616 UBE2D2P62837 147 aa12.53□□□□□ -0.4
SREBF1-212ENST00000478616 C10orf126Q8N4M7 172 aa12.53□□□□□ -0.4
SREBF1-212ENST00000478616 OR10G8Q8NGN5 311 aa12.53□□□□□ -0.4
SREBF1-212ENST00000478616 IFNA1P01562 189 aa12.52□□□□□ -0.41
SREBF1-212ENST00000478616 DNAJC30Q96LL9 226 aa12.52□□□□□ -0.41
SREBF1-212ENST00000478616 VAX2Q9UIW0 290 aa12.52□□□□□ -0.41
SREBF1-212ENST00000478616 PDE6DO43924 150 aa12.51□□□□□ -0.41
SREBF1-212ENST00000478616 DAZ4Q86SG3 579 aaKnown RBP12.51□□□□□ -0.41
SREBF1-212ENST00000478616 NEXN-AS1Q8NBZ9 246 aa12.51□□□□□ -0.41
SREBF1-212ENST00000478616 DAZ3Q9NR90 486 aaKnown RBP12.51□□□□□ -0.41
SREBF1-212ENST00000478616 MED9Q9NWA0 146 aa12.51□□□□□ -0.41
SREBF1-212ENST00000478616 TRBV10-1A0A0K0K1A3 114 aa12.5□□□□□ -0.41
SREBF1-212ENST00000478616 K7EN84 100 aa12.5□□□□□ -0.41
SREBF1-212ENST00000478616 ERVFC1-1P60608 527 aa12.5□□□□□ -0.41
SREBF1-212ENST00000478616 WFDC2Q14508 124 aa12.5□□□□□ -0.41
SREBF1-212ENST00000478616 SMIM12Q96EX1 92 aa12.5□□□□□ -0.41
SREBF1-212ENST00000478616 GNG4P50150 75 aa12.49□□□□□ -0.41
SREBF1-212ENST00000478616 KRTAP10-1P60331 282 aa12.49□□□□□ -0.41
SREBF1-212ENST00000478616 RAB4BP61018 213 aa12.49□□□□□ -0.41
SREBF1-212ENST00000478616 SSTP61278 116 aa12.49□□□□□ -0.41
SREBF1-212ENST00000478616 MAPKAPK5-AS1Q8N8E1 139 aa12.49□□□□□ -0.41
SREBF1-212ENST00000478616 OR2D3Q8NGH3 330 aa12.49□□□□□ -0.41
SREBF1-212ENST00000478616 Q9HAA7 133 aa12.49□□□□□ -0.41
SREBF1-212ENST00000478616 NIT1Q86X76 327 aa12.48□□□□□ -0.41
SREBF1-212ENST00000478616 TRBV7-3A0A075B6L6 115 aa12.47□□□□□ -0.41
SREBF1-212ENST00000478616 TAGLN2P37802 199 aaKnown RBP12.47□□□□□ -0.41
SREBF1-212ENST00000478616 IFITM2Q01629 132 aa12.47□□□□□ -0.41
SREBF1-212ENST00000478616 LAGE3Q14657 143 aa12.47□□□□□ -0.41
SREBF1-212ENST00000478616 SPANXN1Q5VSR9 72 aa12.47□□□□□ -0.41
SREBF1-212ENST00000478616 NUDT10Q8NFP7 164 aa12.47□□□□□ -0.41
SREBF1-212ENST00000478616 OCC1Q8TAD7 63 aa12.47□□□□□ -0.41
SREBF1-212ENST00000478616 NUDT11Q96G61 164 aa12.47□□□□□ -0.41
SREBF1-212ENST00000478616 NTM-AS1Q6ZSK4 140 aa12.46□□□□□ -0.41
SREBF1-212ENST00000478616 FER1L6-AS1Q8NA97 138 aa12.46□□□□□ -0.41
SREBF1-212ENST00000478616 PGPEP1Q9NXJ5 209 aa12.46□□□□□ -0.41
SREBF1-212ENST00000478616 A0A087WWC5 75 aa12.45□□□□□ -0.42
SREBF1-212ENST00000478616 XGP55808 180 aa12.45□□□□□ -0.42
SREBF1-212ENST00000478616 ZNF56Q15929 161 aa12.45□□□□□ -0.42
SREBF1-212ENST00000478616 RNASE7Q9H1E1 156 aaKnown RBP12.45□□□□□ -0.42
SREBF1-212ENST00000478616 RPL36AP83881 106 aaKnown RBP12.44□□□□□ -0.42
SREBF1-212ENST00000478616 TOR2AQ5JU69 321 aa12.44□□□□□ -0.42
SREBF1-212ENST00000478616 RPL36ALQ969Q0 106 aaKnown RBP12.44□□□□□ -0.42
SREBF1-212ENST00000478616 FAM210AQ96ND0 272 aa12.44□□□□□ -0.42
SREBF1-212ENST00000478616 M0QY20 66 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms