RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 SSBP4Q9BWG4 385 aaPredicted RBP15.77■□□□□ 0.12
C9orf3-215ENST00000478473 Q9UF83 564 aa15.77■□□□□ 0.12
C9orf3-215ENST00000478473 PCLOQ9Y6V0 5065 aa15.76■□□□□ 0.11
C9orf3-215ENST00000478473 A0A087WTM6 91 aa15.76■□□□□ 0.11
C9orf3-215ENST00000478473 OR10J3Q5JRS4 329 aa15.76■□□□□ 0.11
C9orf3-215ENST00000478473 CDPF1Q6NVV7 123 aa15.76■□□□□ 0.11
C9orf3-215ENST00000478473 TMSB15BA0A087X1C1 80 aa15.75■□□□□ 0.11
C9orf3-215ENST00000478473 EREGO14944 169 aa15.75■□□□□ 0.11
C9orf3-215ENST00000478473 C14orf178Q8N769 122 aaPredicted RBP15.75■□□□□ 0.11
C9orf3-215ENST00000478473 SNAI2O43623 268 aa15.74■□□□□ 0.11
C9orf3-215ENST00000478473 RPL35P42766 123 aaKnown RBP15.74■□□□□ 0.11
C9orf3-215ENST00000478473 SLC51BQ86UW2 128 aa15.74■□□□□ 0.11
C9orf3-215ENST00000478473 A0A087WWC5 75 aa15.73■□□□□ 0.11
C9orf3-215ENST00000478473 GAGE12JA6NER3 117 aa15.73■□□□□ 0.11
C9orf3-215ENST00000478473 TEX46H3BTG2 121 aa15.73■□□□□ 0.11
C9orf3-215ENST00000478473 OR5AL1P0C617 328 aa15.73■□□□□ 0.11
C9orf3-215ENST00000478473 GAGE1Q13065 139 aa15.73■□□□□ 0.11
C9orf3-215ENST00000478473 GAGE4Q13068 117 aa15.73■□□□□ 0.11
C9orf3-215ENST00000478473 GAGE5Q13069 117 aa15.73■□□□□ 0.11
C9orf3-215ENST00000478473 GAGE13Q4V321 117 aa15.73■□□□□ 0.11
C9orf3-215ENST00000478473 GNG13Q9P2W3 67 aa15.73■□□□□ 0.11
C9orf3-215ENST00000478473 TRBV10-1A0A0K0K1A3 114 aa15.72■□□□□ 0.11
C9orf3-215ENST00000478473 M0R381 172 aa15.72■□□□□ 0.11
C9orf3-215ENST00000478473 LAGE3Q14657 143 aa15.72■□□□□ 0.11
C9orf3-215ENST00000478473 SMIM12Q96EX1 92 aa15.72■□□□□ 0.11
C9orf3-215ENST00000478473 RPL19P84098 196 aaKnown RBP15.71■□□□□ 0.11
C9orf3-215ENST00000478473 DERL1Q9BUN8 251 aa15.71■□□□□ 0.11
C9orf3-215ENST00000478473 A0A087WWL8 130 aa15.7■□□□□ 0.1
C9orf3-215ENST00000478473 FAM74A4Q5TZK3 123 aa15.7■□□□□ 0.1
C9orf3-215ENST00000478473 IGLV2-8P01709 118 aa15.69■□□□□ 0.1
C9orf3-215ENST00000478473 MEF2BQ02080 365 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-215ENST00000478473 OR10AG1Q8NH19 301 aa15.69■□□□□ 0.1
C9orf3-215ENST00000478473 LRCOL1A6NCL2 159 aa15.68■□□□□ 0.1
C9orf3-215ENST00000478473 PDE6DO43924 150 aa15.68■□□□□ 0.1
C9orf3-215ENST00000478473 OR10G8Q8NGN5 311 aa15.68■□□□□ 0.1
C9orf3-215ENST00000478473 KRTAP4-5Q9BYR2 181 aa15.68■□□□□ 0.1
C9orf3-215ENST00000478473 PRR27Q6MZM9 219 aa15.67■□□□□ 0.1
C9orf3-215ENST00000478473 IGHV3-30P01768 117 aa15.66■□□□□ 0.1
C9orf3-215ENST00000478473 IGHV3-33P01772 117 aa15.66■□□□□ 0.1
C9orf3-215ENST00000478473 IGHV3-30-3P0DP02 117 aa15.66■□□□□ 0.1
C9orf3-215ENST00000478473 IGHV3-30-5P0DP03 117 aa15.66■□□□□ 0.1
C9orf3-215ENST00000478473 TAGLN2P37802 199 aaKnown RBP15.66■□□□□ 0.1
C9orf3-215ENST00000478473 RAB4BP61018 213 aa15.66■□□□□ 0.1
C9orf3-215ENST00000478473 CENPWQ5EE01 88 aa15.66■□□□□ 0.1
C9orf3-215ENST00000478473 C9orf62Q8N4C0 152 aa15.66■□□□□ 0.1
C9orf3-215ENST00000478473 C19orf71A6NCJ1 209 aa15.65■□□□□ 0.1
C9orf3-215ENST00000478473 BCL2P10415 239 aa15.65■□□□□ 0.1
C9orf3-215ENST00000478473 UBE2D3P61077 147 aa15.65■□□□□ 0.1
C9orf3-215ENST00000478473 UBE2D2P62837 147 aa15.65■□□□□ 0.1
C9orf3-215ENST00000478473 TRBV7-3A0A075B6L6 115 aa15.64■□□□□ 0.09
C9orf3-215ENST00000478473 IFNA1P01562 189 aa15.64■□□□□ 0.09
C9orf3-215ENST00000478473 RPL36AP83881 106 aaKnown RBP15.64■□□□□ 0.09
C9orf3-215ENST00000478473 AKAP14Q86UN6 197 aa15.64■□□□□ 0.09
C9orf3-215ENST00000478473 RPL36ALQ969Q0 106 aaKnown RBP15.64■□□□□ 0.09
C9orf3-215ENST00000478473 TRBV20OR9-2A0A075B6H5 130 aa15.63■□□□□ 0.09
C9orf3-215ENST00000478473 IGLC6P0CF74 106 aa15.63■□□□□ 0.09
C9orf3-215ENST00000478473 Q8N1X5 172 aa15.63■□□□□ 0.09
C9orf3-215ENST00000478473 Q8N3U1 123 aa15.63■□□□□ 0.09
C9orf3-215ENST00000478473 MAPKAPK5-AS1Q8N8E1 139 aa15.63■□□□□ 0.09
C9orf3-215ENST00000478473 VAX2Q9UIW0 290 aa15.63■□□□□ 0.09
C9orf3-215ENST00000478473 KIF25-AS1Q9Y6Z4 181 aa15.63■□□□□ 0.09
C9orf3-215ENST00000478473 SPANXN1Q5VSR9 72 aa15.62■□□□□ 0.09
C9orf3-215ENST00000478473 NIT1Q86X76 327 aa15.62■□□□□ 0.09
C9orf3-215ENST00000478473 CHCHD7Q9BUK0 85 aa15.62■□□□□ 0.09
C9orf3-215ENST00000478473 ABCA13Q86UQ4 5058 aa15.61■□□□□ 0.09
C9orf3-215ENST00000478473 TRAV8-3A0A0A6YYJ7 113 aa15.61■□□□□ 0.09
C9orf3-215ENST00000478473 RAB19A4D1S5 217 aa15.61■□□□□ 0.09
C9orf3-215ENST00000478473 PSCAO43653 123 aa15.61■□□□□ 0.09
C9orf3-215ENST00000478473 GNG4P50150 75 aa15.61■□□□□ 0.09
C9orf3-215ENST00000478473 RPS20P60866 119 aaKnown RBP15.61■□□□□ 0.09
C9orf3-215ENST00000478473 NTN5Q8WTR8 489 aaPredicted RBP15.61■□□□□ 0.09
C9orf3-215ENST00000478473 TM2D2Q9BX73 214 aa15.61■□□□□ 0.09
C9orf3-215ENST00000478473 TOR2AQ5JU69 321 aa15.6■□□□□ 0.09
C9orf3-215ENST00000478473 DAZ4Q86SG3 579 aaKnown RBP15.6■□□□□ 0.09
C9orf3-215ENST00000478473 NEXN-AS1Q8NBZ9 246 aa15.6■□□□□ 0.09
C9orf3-215ENST00000478473 Q9HAA7 133 aa15.6■□□□□ 0.09
C9orf3-215ENST00000478473 DAZ3Q9NR90 486 aaKnown RBP15.6■□□□□ 0.09
C9orf3-215ENST00000478473 MED9Q9NWA0 146 aa15.6■□□□□ 0.09
C9orf3-215ENST00000478473 FUSP35637 526 aaKnown RBP eCLIP15.59■□□□□ 0.09
C9orf3-215ENST00000478473 BIN3Q9NQY0 253 aa15.59■□□□□ 0.09
C9orf3-215ENST00000478473 KRTAP10-1P60331 282 aa15.58■□□□□ 0.08
C9orf3-215ENST00000478473 OR2D3Q8NGH3 330 aa15.58■□□□□ 0.08
C9orf3-215ENST00000478473 LYPD6BQ8NI32 183 aa15.58■□□□□ 0.08
C9orf3-215ENST00000478473 DAZAP1Q96EP5 407 aaKnown RBP15.58■□□□□ 0.08
C9orf3-215ENST00000478473 AP1S3Q96PC3 154 aa15.58■□□□□ 0.08
C9orf3-215ENST00000478473 ZNF56Q15929 161 aa15.57■□□□□ 0.08
C9orf3-215ENST00000478473 Q8N814 137 aa15.57■□□□□ 0.08
C9orf3-215ENST00000478473 FER1L6-AS1Q8NA97 138 aa15.57■□□□□ 0.08
C9orf3-215ENST00000478473 TRBV6-8A0A0A6YYG3 113 aa15.56■□□□□ 0.08
C9orf3-215ENST00000478473 MUC21A0A0G2JKD1 596 aa15.56■□□□□ 0.08
C9orf3-215ENST00000478473 MUC21A0A140T8X8 626 aa15.56■□□□□ 0.08
C9orf3-215ENST00000478473 XGP55808 180 aa15.56■□□□□ 0.08
C9orf3-215ENST00000478473 COX11Q9Y6N1 276 aa15.56■□□□□ 0.08
C9orf3-215ENST00000478473 XKRY2A2RUG3 117 aa15.55■□□□□ 0.08
C9orf3-215ENST00000478473 F2Z2F3 143 aa15.55■□□□□ 0.08
C9orf3-215ENST00000478473 GZMBP10144 247 aa15.55■□□□□ 0.08
C9orf3-215ENST00000478473 GCSHP23434 173 aa15.55■□□□□ 0.08
C9orf3-215ENST00000478473 CACNG7P62955 275 aa15.55■□□□□ 0.08
C9orf3-215ENST00000478473 P01737 135 aa15.54■□□□□ 0.08
C9orf3-215ENST00000478473 BLOC1S1P78537 153 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms