RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ZNF727A8MUV8 499 aa7.1□□□□□ -1.27
HDAC6-222ENST00000478095 SNAI2O43623 268 aa7.1□□□□□ -1.27
HDAC6-222ENST00000478095 SRIP30626 198 aa7.1□□□□□ -1.27
HDAC6-222ENST00000478095 RPS20P60866 119 aaKnown RBP7.1□□□□□ -1.27
HDAC6-222ENST00000478095 RAB14P61106 215 aa7.1□□□□□ -1.27
HDAC6-222ENST00000478095 PIK3CD-AS1Q5SR53 167 aa7.1□□□□□ -1.27
HDAC6-222ENST00000478095 UFSP1Q6NVU6 142 aa7.1□□□□□ -1.27
HDAC6-222ENST00000478095 FER1L6-AS1Q8NA97 138 aa7.1□□□□□ -1.27
HDAC6-222ENST00000478095 SFRP2Q96HF1 295 aa7.1□□□□□ -1.27
HDAC6-222ENST00000478095 RPP21Q9H633 154 aaKnown RBP7.1□□□□□ -1.27
HDAC6-222ENST00000478095 NXPH4O95158 308 aa7.09□□□□□ -1.27
HDAC6-222ENST00000478095 OR5AL1P0C617 328 aa7.09□□□□□ -1.27
HDAC6-222ENST00000478095 IGLC6P0CF74 106 aa7.09□□□□□ -1.27
HDAC6-222ENST00000478095 IFITM2Q01629 132 aa7.09□□□□□ -1.27
HDAC6-222ENST00000478095 PEA15Q15121 130 aa7.09□□□□□ -1.27
HDAC6-222ENST00000478095 RHOHQ15669 191 aa7.09□□□□□ -1.27
HDAC6-222ENST00000478095 MRPL23Q16540 153 aaKnown RBP7.09□□□□□ -1.27
HDAC6-222ENST00000478095 LINC01551Q86U37 167 aa7.09□□□□□ -1.27
HDAC6-222ENST00000478095 ZNRF2Q8NHG8 242 aa7.09□□□□□ -1.27
HDAC6-222ENST00000478095 MUC4Q99102 2169 aa7.09□□□□□ -1.27
HDAC6-222ENST00000478095 TRBV6-4A0A1B0GX49 114 aa7.08□□□□□ -1.28
HDAC6-222ENST00000478095 XKRY2A2RUG3 117 aa7.08□□□□□ -1.28
HDAC6-222ENST00000478095 RHODO00212 210 aa7.08□□□□□ -1.28
HDAC6-222ENST00000478095 CIDEAO60543 219 aa7.08□□□□□ -1.28
HDAC6-222ENST00000478095 NDUFS6O75380 124 aaKnown RBP7.08□□□□□ -1.28
HDAC6-222ENST00000478095 CRYGDP07320 174 aa7.08□□□□□ -1.28
HDAC6-222ENST00000478095 ZFP2Q6ZN57 461 aa7.08□□□□□ -1.28
HDAC6-222ENST00000478095 NEGR1Q7Z3B1 354 aa7.08□□□□□ -1.28
HDAC6-222ENST00000478095 C14orf178Q8N769 122 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-222ENST00000478095 PRADC1Q9BSG0 188 aa7.08□□□□□ -1.28
HDAC6-222ENST00000478095 MRPS16Q9Y3D3 137 aaKnown RBP7.08□□□□□ -1.28
HDAC6-222ENST00000478095 KMT2AQ03164 3969 aa7.08□□□□□ -1.28
HDAC6-222ENST00000478095 GAGE12JA6NER3 117 aa7.07□□□□□ -1.28
HDAC6-222ENST00000478095 GATCO43716 136 aaKnown RBP7.07□□□□□ -1.28
HDAC6-222ENST00000478095 FAM3BP58499 235 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-222ENST00000478095 ERVFC1-1P60608 527 aa7.07□□□□□ -1.28
HDAC6-222ENST00000478095 GAGE1Q13065 139 aa7.07□□□□□ -1.28
HDAC6-222ENST00000478095 GAGE4Q13068 117 aa7.07□□□□□ -1.28
HDAC6-222ENST00000478095 GAGE5Q13069 117 aa7.07□□□□□ -1.28
HDAC6-222ENST00000478095 GAGE13Q4V321 117 aa7.07□□□□□ -1.28
HDAC6-222ENST00000478095 LYPD5Q6UWN5 251 aa7.07□□□□□ -1.28
HDAC6-222ENST00000478095 LYZL1Q6UWQ5 148 aa7.07□□□□□ -1.28
HDAC6-222ENST00000478095 MSRB1Q9NZV6 116 aa7.07□□□□□ -1.28
HDAC6-222ENST00000478095 Q9UF83 564 aa7.07□□□□□ -1.28
HDAC6-222ENST00000478095 LY96Q9Y6Y9 160 aa7.07□□□□□ -1.28
HDAC6-222ENST00000478095 ZNF56Q15929 161 aa7.06□□□□□ -1.28
HDAC6-222ENST00000478095 TMEM241Q24JQ0 296 aa7.06□□□□□ -1.28
HDAC6-222ENST00000478095 CLLU1Q5K131 121 aa7.06□□□□□ -1.28
HDAC6-222ENST00000478095 FAM231DQ6ZW35 169 aa7.06□□□□□ -1.28
HDAC6-222ENST00000478095 GTSF1Q8WW33 167 aa7.06□□□□□ -1.28
HDAC6-222ENST00000478095 AP1S3Q96PC3 154 aa7.06□□□□□ -1.28
HDAC6-222ENST00000478095 Q9H8V8 135 aa7.06□□□□□ -1.28
HDAC6-222ENST00000478095 NBDYA0A0U1RRE5 68 aa7.05□□□□□ -1.28
HDAC6-222ENST00000478095 A0A1W2PPQ1 181 aa7.05□□□□□ -1.28
HDAC6-222ENST00000478095 RPL23P62829 140 aaKnown RBP7.05□□□□□ -1.28
HDAC6-222ENST00000478095 CACNG7P62955 275 aa7.05□□□□□ -1.28
HDAC6-222ENST00000478095 ADIRFQ15847 76 aa7.05□□□□□ -1.28
HDAC6-222ENST00000478095 FAM74A3Q4VXF1 159 aa7.05□□□□□ -1.28
HDAC6-222ENST00000478095 SOHLH1Q5JUK2 328 aa7.05□□□□□ -1.28
HDAC6-222ENST00000478095 ISOC2Q96AB3 205 aa7.05□□□□□ -1.28
HDAC6-222ENST00000478095 UPK3BQ9BT76 320 aa7.05□□□□□ -1.28
HDAC6-222ENST00000478095 SMDT1Q9H4I9 107 aa7.05□□□□□ -1.28
HDAC6-222ENST00000478095 NAT8Q9UHE5 227 aa7.05□□□□□ -1.28
HDAC6-222ENST00000478095 F2Z2F3 143 aa7.04□□□□□ -1.28
HDAC6-222ENST00000478095 F5H697 171 aa7.04□□□□□ -1.28
HDAC6-222ENST00000478095 MGPP08493 103 aa7.04□□□□□ -1.28
HDAC6-222ENST00000478095 SMIM17P0DL12 118 aa7.04□□□□□ -1.28
HDAC6-222ENST00000478095 NTF3P20783 257 aa7.04□□□□□ -1.28
HDAC6-222ENST00000478095 CTRLP40313 264 aa7.04□□□□□ -1.28
HDAC6-222ENST00000478095 Q6ZR54 194 aa7.04□□□□□ -1.28
HDAC6-222ENST00000478095 WFDC10BQ8IUB3 73 aa7.04□□□□□ -1.28
HDAC6-222ENST00000478095 ATP6V0E2Q8NHE4 81 aa7.04□□□□□ -1.28
HDAC6-222ENST00000478095 PGLYRP4Q96LB8 373 aa7.04□□□□□ -1.28
HDAC6-222ENST00000478095 KIF25-AS1Q9Y6Z4 181 aa7.04□□□□□ -1.28
HDAC6-222ENST00000478095 A8MWL6 223 aa7.03□□□□□ -1.28
HDAC6-222ENST00000478095 LINC00694P0DN24 101 aa7.03□□□□□ -1.28
HDAC6-222ENST00000478095 EVI2AP22794 236 aa7.03□□□□□ -1.28
HDAC6-222ENST00000478095 TWIST1Q15672 202 aa7.03□□□□□ -1.28
HDAC6-222ENST00000478095 CT83Q5H943 113 aa7.03□□□□□ -1.28
HDAC6-222ENST00000478095 SH2D6Q7Z4S9 175 aa7.03□□□□□ -1.28
HDAC6-222ENST00000478095 C15orf54Q8N8G6 183 aa7.03□□□□□ -1.28
HDAC6-222ENST00000478095 KRTAP1-5Q9BYS1 174 aa7.03□□□□□ -1.28
HDAC6-222ENST00000478095 OSTCQ9NRP0 149 aa7.03□□□□□ -1.28
HDAC6-222ENST00000478095 V9GYV3 84 aa7.03□□□□□ -1.28
HDAC6-222ENST00000478095 DNAH6Q9C0G6 4158 aa7.02□□□□□ -1.29
HDAC6-222ENST00000478095 SIVA1O15304 175 aa7.02□□□□□ -1.29
HDAC6-222ENST00000478095 LINC00315P59091 139 aa7.02□□□□□ -1.29
HDAC6-222ENST00000478095 RAB4BP61018 213 aa7.02□□□□□ -1.29
HDAC6-222ENST00000478095 OR10G8Q8NGN5 311 aa7.02□□□□□ -1.29
HDAC6-222ENST00000478095 TSKUQ8WUA8 353 aa7.02□□□□□ -1.29
HDAC6-222ENST00000478095 NACAE9PAV3 2078 aa7.01□□□□□ -1.29
HDAC6-222ENST00000478095 TRBV10-1A0A0K0K1A3 114 aa7.01□□□□□ -1.29
HDAC6-222ENST00000478095 HIGD1CA8MV81 97 aa7.01□□□□□ -1.29
HDAC6-222ENST00000478095 TRGC1P0CF51 173 aa7.01□□□□□ -1.29
HDAC6-222ENST00000478095 FOXA3P55318 350 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-222ENST00000478095 RPL36AP83881 106 aaKnown RBP7.01□□□□□ -1.29
HDAC6-222ENST00000478095 OR10J3Q5JRS4 329 aa7.01□□□□□ -1.29
HDAC6-222ENST00000478095 SUMO4Q6EEV6 95 aa7.01□□□□□ -1.29
HDAC6-222ENST00000478095 NEXN-AS1Q8NBZ9 246 aa7.01□□□□□ -1.29
HDAC6-222ENST00000478095 RPL36ALQ969Q0 106 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 229.3 ms