RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 GNRH2O43555 120 aa4.25□□□□□ -1.73
SPTLC3-205ENST00000476791 LYZL2Q7Z4W2 148 aa4.25□□□□□ -1.73
SPTLC3-205ENST00000476791 LINC00574Q9H8X3 128 aa4.25□□□□□ -1.73
SPTLC3-205ENST00000476791 MYO16Q9Y6X6 1858 aa4.25□□□□□ -1.73
SPTLC3-205ENST00000476791 SDK2Q58EX2 2172 aa4.25□□□□□ -1.73
SPTLC3-205ENST00000476791 IGKV3D-7A0A0C4DH55 119 aa4.24□□□□□ -1.73
SPTLC3-205ENST00000476791 CTXND1A0A1B0GTU2 59 aa4.24□□□□□ -1.73
SPTLC3-205ENST00000476791 IGHV4-39P01824 125 aa4.24□□□□□ -1.73
SPTLC3-205ENST00000476791 CXCL17Q6UXB2 119 aa4.24□□□□□ -1.73
SPTLC3-205ENST00000476791 ZNF497Q6ZNH5 498 aa4.24□□□□□ -1.73
SPTLC3-205ENST00000476791 DYNAPQ8N1N2 210 aa4.24□□□□□ -1.73
SPTLC3-205ENST00000476791 KRTAP4-5Q9BYR2 181 aa4.24□□□□□ -1.73
SPTLC3-205ENST00000476791 ZGRF1Q86YA3 2104 aa4.24□□□□□ -1.73
SPTLC3-205ENST00000476791 SSC5DA1L4H1 1573 aa4.24□□□□□ -1.73
SPTLC3-205ENST00000476791 TMEM223A0PJW6 202 aa4.24□□□□□ -1.73
SPTLC3-205ENST00000476791 HCG22E2RYF7 251 aa4.24□□□□□ -1.73
SPTLC3-205ENST00000476791 HMGN2P05204 90 aaKnown RBP4.24□□□□□ -1.73
SPTLC3-205ENST00000476791 BPTFQ12830 3046 aa4.24□□□□□ -1.73
SPTLC3-205ENST00000476791 CFC1BP0CG36 223 aa4.23□□□□□ -1.73
SPTLC3-205ENST00000476791 CFC1P0CG37 223 aa4.23□□□□□ -1.73
SPTLC3-205ENST00000476791 TFF2Q03403 129 aa4.23□□□□□ -1.73
SPTLC3-205ENST00000476791 INTS1Q8N201 2190 aaKnown RBP4.23□□□□□ -1.73
SPTLC3-205ENST00000476791 IGKV1-39P01597 117 aa4.23□□□□□ -1.73
SPTLC3-205ENST00000476791 IGKV1D-39P04432 117 aa4.23□□□□□ -1.73
SPTLC3-205ENST00000476791 MIFP14174 115 aa4.23□□□□□ -1.73
SPTLC3-205ENST00000476791 VMO1Q7Z5L0 202 aa4.23□□□□□ -1.73
SPTLC3-205ENST00000476791 TMEM141Q96I45 108 aa4.23□□□□□ -1.73
SPTLC3-205ENST00000476791 TRAV3A0A0B4J244 114 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 NDUFC1O43677 76 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 IFI6P09912 130 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 HMGA1P17096 107 aaKnown RBP4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 Q8N6K4 173 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 CCL28Q9NRJ3 127 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 TAC3Q9UHF0 121 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 PHLDA3Q9Y5J5 127 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 IGLV3-32A0A0A0MS00 114 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 FSHBP01225 129 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 PI4KAP42356 2102 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 Q5VV11 94 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 Q6JHZ5 121 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 CCL4L1Q8NHW4 92 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 RETNLBQ9BQ08 111 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 DOCK10Q96BY6 2186 aa4.22□□□□□ -1.73
SPTLC3-205ENST00000476791 SDHAF1A6NFY7 115 aa4.21□□□□□ -1.73
SPTLC3-205ENST00000476791 CPSF4LA6NMK7 179 aaKnown RBP4.21□□□□□ -1.73
SPTLC3-205ENST00000476791 CGB3P0DN86 165 aa4.21□□□□□ -1.73
SPTLC3-205ENST00000476791 CGB7P0DN87 165 aa4.21□□□□□ -1.73
SPTLC3-205ENST00000476791 MRPL51Q4U2R6 128 aaKnown RBP4.21□□□□□ -1.73
SPTLC3-205ENST00000476791 Q6ZSN1 163 aa4.21□□□□□ -1.73
SPTLC3-205ENST00000476791 RPRMLQ8N4K4 120 aa4.21□□□□□ -1.73
SPTLC3-205ENST00000476791 PRO1854Q9UHT4 67 aa4.21□□□□□ -1.73
SPTLC3-205ENST00000476791 C3orf84H3BNL1 204 aa4.21□□□□□ -1.74
SPTLC3-205ENST00000476791 ZNF32P17041 273 aa4.21□□□□□ -1.74
SPTLC3-205ENST00000476791 Q0VFX4 171 aa4.21□□□□□ -1.74
SPTLC3-205ENST00000476791 KRTAP27-1Q3LI81 207 aa4.21□□□□□ -1.74
SPTLC3-205ENST00000476791 KLF14Q8TD94 323 aaPredicted RBP4.21□□□□□ -1.74
SPTLC3-205ENST00000476791 COL2A1P02458 1487 aaPredicted RBP4.21□□□□□ -1.74
SPTLC3-205ENST00000476791 TET2Q6N021 2002 aaPredicted RBP4.21□□□□□ -1.74
SPTLC3-205ENST00000476791 TRAV23DV6A0A075B6W5 121 aa4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 LRCOL1A6NCL2 159 aa4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 GNLYP22749 145 aa4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 RPL28P46779 137 aaKnown RBP4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 IGLV3-21P80748 117 aaPredicted RBP4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 KIAA0100Q14667 2235 aaKnown RBP4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 WFDC6Q9BQY6 131 aa4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 TRAV7A0A075B6U4 112 aa4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 IGHV3OR16-10A0A075B7F0 116 aa4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 PLGLAQ15195 96 aa4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 Q8IYB0 196 aa4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 Q8N1X5 172 aa4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 ZNF525Q8N782 197 aa4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 FGF22Q9HCT0 170 aa4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 KIF26BQ2KJY2 2108 aa4.2□□□□□ -1.74
SPTLC3-205ENST00000476791 IGHV3-20A0A0C4DH32 117 aa4.19□□□□□ -1.74
SPTLC3-205ENST00000476791 ATP6V0E1O15342 81 aa4.19□□□□□ -1.74
SPTLC3-205ENST00000476791 IGHV3-33P01772 117 aa4.19□□□□□ -1.74
SPTLC3-205ENST00000476791 PRSS1P07477 247 aa4.19□□□□□ -1.74
SPTLC3-205ENST00000476791 DEFA4P12838 97 aa4.19□□□□□ -1.74
SPTLC3-205ENST00000476791 C20orf203Q8NBC4 194 aa4.19□□□□□ -1.74
SPTLC3-205ENST00000476791 CEP350Q5VT06 3117 aa4.19□□□□□ -1.74
SPTLC3-205ENST00000476791 IGHV1-2P23083 117 aa4.19□□□□□ -1.74
SPTLC3-205ENST00000476791 CMC4P56277 68 aaPredicted RBP4.19□□□□□ -1.74
SPTLC3-205ENST00000476791 SMIM11AP58511 58 aa4.19□□□□□ -1.74
SPTLC3-205ENST00000476791 IGKV6D-41A0A0C4DH26 115 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 hDV103S1A0JD37 113 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 C19orf84I3L1E1 186 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 LY6HO94772 140 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 IGLV1-51P01701 117 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 CCL14Q16627 93 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 Q96M85 177 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 IGHV1OR15-1A0A075B7D0 117 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 IGKV1-6A0A0C4DH72 117 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 IGHV4-34P06331 123 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 Q6ZTC4 211 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 FDCSPQ8NFU4 85 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 LINC00476Q8WZB0 136 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 TXNDC17Q9BRA2 123 aa4.18□□□□□ -1.74
SPTLC3-205ENST00000476791 SVILO95425 2214 aa4.17□□□□□ -1.74
SPTLC3-205ENST00000476791 KRTAP16-1A8MUX0 517 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms