RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 S100A4P26447 101 aaKnown RBP12□□□□□ -0.49
VARS2-207ENST00000476162 APRG1Q8IVJ8 170 aa12□□□□□ -0.49
VARS2-207ENST00000476162 ZNF702PQ9H963 129 aa12□□□□□ -0.49
VARS2-207ENST00000476162 IGKV2D-26A0A0A0MRZ7 120 aa11.99□□□□□ -0.49
VARS2-207ENST00000476162 M0R381 172 aa11.99□□□□□ -0.49
VARS2-207ENST00000476162 ID1P41134 155 aa11.99□□□□□ -0.49
VARS2-207ENST00000476162 LEPP41159 167 aa11.99□□□□□ -0.49
VARS2-207ENST00000476162 GAGE5Q13069 117 aa11.99□□□□□ -0.49
VARS2-207ENST00000476162 GAGE6Q13070 117 aa11.99□□□□□ -0.49
VARS2-207ENST00000476162 NRACQ8N912 160 aa11.99□□□□□ -0.49
VARS2-207ENST00000476162 DKK2Q9UBU2 259 aa11.99□□□□□ -0.49
VARS2-207ENST00000476162 APOMO95445 188 aa11.99□□□□□ -0.49
VARS2-207ENST00000476162 ASIPP42127 132 aa11.99□□□□□ -0.49
VARS2-207ENST00000476162 CREBBPQ92793 2442 aa11.99□□□□□ -0.49
VARS2-207ENST00000476162 IGLV2-18A0A075B6J9 118 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 TRBV7-9A0A0J9YWB2 115 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 A0A1B0GWB2 263 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 GNRH2O43555 120 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 FCER1GP30273 86 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 Q6ZUT4 128 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 Q8N8P6 123 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 Q96MF0 132 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 TRBV25-1A0A075B6N4 114 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 XGP55808 180 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 SYNJ2BPP57105 145 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 PSMG4Q5JS54 123 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 LRRC75A-AS1Q8N1F1 130 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 TTTY13Q9BZ97 58 aa11.98□□□□□ -0.49
VARS2-207ENST00000476162 TEX15Q9BXT5 2789 aa11.97□□□□□ -0.49
VARS2-207ENST00000476162 K7EMI3 77 aa11.97□□□□□ -0.49
VARS2-207ENST00000476162 ATP6V0E2Q8NHE4 81 aa11.97□□□□□ -0.49
VARS2-207ENST00000476162 FAM110AQ9BQ89 295 aa11.97□□□□□ -0.49
VARS2-207ENST00000476162 PHLDA3Q9Y5J5 127 aa11.97□□□□□ -0.49
VARS2-207ENST00000476162 IGHV4OR15-8A0A075B7B6 117 aa11.96□□□□□ -0.49
VARS2-207ENST00000476162 A0A087WW49 117 aa11.96□□□□□ -0.49
VARS2-207ENST00000476162 ELANEP08246 267 aa11.96□□□□□ -0.49
VARS2-207ENST00000476162 LGALS1P09382 135 aaKnown RBP11.96□□□□□ -0.49
VARS2-207ENST00000476162 ZNF688P0C7X2 276 aa11.96□□□□□ -0.49
VARS2-207ENST00000476162 FHL3Q13643 280 aa11.96□□□□□ -0.49
VARS2-207ENST00000476162 C12orf74Q32Q52 190 aa11.96□□□□□ -0.49
VARS2-207ENST00000476162 DUX5Q96PT3 197 aa11.96□□□□□ -0.49
VARS2-207ENST00000476162 C1QTNF4Q9BXJ3 329 aa11.96□□□□□ -0.49
VARS2-207ENST00000476162 HHLA3Q9XRX5 114 aa11.96□□□□□ -0.49
VARS2-207ENST00000476162 KLLNB2CW77 178 aa11.96□□□□□ -0.49
VARS2-207ENST00000476162 RNASE3P12724 160 aaKnown RBP11.96□□□□□ -0.49
VARS2-207ENST00000476162 MYOZ3Q8TDC0 251 aa11.96□□□□□ -0.49
VARS2-207ENST00000476162 TMEM158Q8WZ71 300 aa11.96□□□□□ -0.49
VARS2-207ENST00000476162 AGRNO00468 2067 aa11.96□□□□□ -0.5
VARS2-207ENST00000476162 ZMAT4Q9H898 229 aa11.95□□□□□ -0.5
VARS2-207ENST00000476162 PRRC2AP48634 2157 aaKnown RBP11.95□□□□□ -0.5
VARS2-207ENST00000476162 HERV-K104P63124 156 aa11.95□□□□□ -0.5
VARS2-207ENST00000476162 C14orf178Q8N769 122 aaPredicted RBP11.95□□□□□ -0.5
VARS2-207ENST00000476162 UBE2E2Q96LR5 201 aa11.95□□□□□ -0.5
VARS2-207ENST00000476162 ANAPC13Q9BS18 74 aa11.95□□□□□ -0.5
VARS2-207ENST00000476162 MED14OSP0DP75 135 aa11.94□□□□□ -0.5
VARS2-207ENST00000476162 RRN3P1Q2M238 152 aa11.94□□□□□ -0.5
VARS2-207ENST00000476162 HOXD3P31249 432 aaPredicted RBP11.94□□□□□ -0.5
VARS2-207ENST00000476162 KRTAP1-3Q8IUG1 177 aa11.94□□□□□ -0.5
VARS2-207ENST00000476162 B5MCH6 92 aa11.93□□□□□ -0.5
VARS2-207ENST00000476162 LGALS9O00182 355 aa11.93□□□□□ -0.5
VARS2-207ENST00000476162 NFE4Q86UQ8 179 aa11.93□□□□□ -0.5
VARS2-207ENST00000476162 DPH3P1Q9H4G8 78 aa11.93□□□□□ -0.5
VARS2-207ENST00000476162 APCP25054 2843 aa11.93□□□□□ -0.5
VARS2-207ENST00000476162 K7EQG2 157 aa11.92□□□□□ -0.5
VARS2-207ENST00000476162 IGKV3-20P01619 116 aa11.92□□□□□ -0.5
VARS2-207ENST00000476162 SMCPP49901 116 aaPredicted RBP11.92□□□□□ -0.5
VARS2-207ENST00000476162 SNRPD3P62318 126 aaKnown RBP11.92□□□□□ -0.5
VARS2-207ENST00000476162 LAGE3Q14657 143 aa11.92□□□□□ -0.5
VARS2-207ENST00000476162 TAL2Q16559 108 aa11.92□□□□□ -0.5
VARS2-207ENST00000476162 FAM159AQ6UWV7 190 aa11.92□□□□□ -0.5
VARS2-207ENST00000476162 TRAV12-3A0A0B4J271 114 aa11.92□□□□□ -0.5
VARS2-207ENST00000476162 RNF152Q8N8N0 203 aa11.92□□□□□ -0.5
VARS2-207ENST00000476162 ZNF469Q96JG9 3925 aaPredicted RBP11.92□□□□□ -0.5
VARS2-207ENST00000476162 PRSS1P07477 247 aa11.91□□□□□ -0.5
VARS2-207ENST00000476162 CFAP126Q5VTH2 177 aa11.91□□□□□ -0.5
VARS2-207ENST00000476162 RASL10AQ92737 203 aa11.91□□□□□ -0.5
VARS2-207ENST00000476162 A0A0J9YX75 114 aa11.91□□□□□ -0.5
VARS2-207ENST00000476162 MGPP08493 103 aa11.91□□□□□ -0.5
VARS2-207ENST00000476162 HLA-DRB4P13762 266 aa11.91□□□□□ -0.5
VARS2-207ENST00000476162 ODF1Q14990 250 aa11.91□□□□□ -0.5
VARS2-207ENST00000476162 C18orf65Q6ZTR6 163 aa11.91□□□□□ -0.5
VARS2-207ENST00000476162 HLA-DRB4X5D2U9 266 aa11.91□□□□□ -0.5
VARS2-207ENST00000476162 RPL39LQ96EH5 51 aaKnown RBP11.9□□□□□ -0.5
VARS2-207ENST00000476162 SMIM2Q9BVW6 85 aa11.9□□□□□ -0.5
VARS2-207ENST00000476162 NHLRC4P0CG21 123 aaPredicted RBP11.9□□□□□ -0.51
VARS2-207ENST00000476162 DEFB136Q30KP8 78 aa11.9□□□□□ -0.51
VARS2-207ENST00000476162 TLN2Q9Y4G6 2542 aa11.9□□□□□ -0.51
VARS2-207ENST00000476162 MUC4Q99102 2169 aa11.89□□□□□ -0.51
VARS2-207ENST00000476162 TRAV12-2A0A075B6T6 113 aa11.89□□□□□ -0.51
VARS2-207ENST00000476162 PRSS29PA6NIE9 313 aa11.89□□□□□ -0.51
VARS2-207ENST00000476162 CD7P09564 240 aa11.89□□□□□ -0.51
VARS2-207ENST00000476162 SUMO2P61956 95 aaKnown RBP11.89□□□□□ -0.51
VARS2-207ENST00000476162 Q8N2B8 174 aa11.89□□□□□ -0.51
VARS2-207ENST00000476162 SORL1Q92673 2214 aa11.89□□□□□ -0.51
VARS2-207ENST00000476162 NBPF19A0A087WUL8 3843 aa11.88□□□□□ -0.51
VARS2-207ENST00000476162 SLURP1P55000 103 aa11.88□□□□□ -0.51
VARS2-207ENST00000476162 GTSCR1Q86UQ5 136 aa11.88□□□□□ -0.51
VARS2-207ENST00000476162 ODF3Q96PU9 254 aa11.88□□□□□ -0.51
VARS2-207ENST00000476162 FOXC2Q99958 501 aa11.88□□□□□ -0.51
VARS2-207ENST00000476162 NXPH4O95158 308 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms