RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	SNAI2	O43623	268 aa		11.22	□□□□□ -0.61
VPS8-222	ENST00000475580	PDE6D	O43924	150 aa		11.22	□□□□□ -0.61
VPS8-222	ENST00000475580	RYR1	P21817	5038 aa		11.22	□□□□□ -0.61
VPS8-222	ENST00000475580	OR10AG1	Q8NH19	301 aa		11.22	□□□□□ -0.61
VPS8-222	ENST00000475580	VAX2	Q9UIW0	290 aa		11.22	□□□□□ -0.61
VPS8-222	ENST00000475580	GAGE12J	A6NER3	117 aa		11.21	□□□□□ -0.61
VPS8-222	ENST00000475580	GAGE1	Q13065	139 aa		11.21	□□□□□ -0.61
VPS8-222	ENST00000475580	GAGE4	Q13068	117 aa		11.21	□□□□□ -0.61
VPS8-222	ENST00000475580	GAGE5	Q13069	117 aa		11.21	□□□□□ -0.61
VPS8-222	ENST00000475580	GAGE13	Q4V321	117 aa		11.21	□□□□□ -0.61
VPS8-222	ENST00000475580	FAM74A4	Q5TZK3	123 aa		11.21	□□□□□ -0.61
VPS8-222	ENST00000475580	ATP6V0E2	Q8NHE4	81 aa		11.21	□□□□□ -0.61
VPS8-222	ENST00000475580	GTSF1L	Q9H1H1	148 aa		11.21	□□□□□ -0.61
VPS8-222	ENST00000475580	BOLA1	Q9Y3E2	137 aa		11.21	□□□□□ -0.61
VPS8-222	ENST00000475580	LRP1B	Q9NZR2	4599 aa		11.2	□□□□□ -0.62
VPS8-222	ENST00000475580	C19orf71	A6NCJ1	209 aa		11.2	□□□□□ -0.62
VPS8-222	ENST00000475580	OR5AL1	P0C617	328 aa		11.2	□□□□□ -0.62
VPS8-222	ENST00000475580	LYPD6B	Q8NI32	183 aa		11.2	□□□□□ -0.62
VPS8-222	ENST00000475580	MED9	Q9NWA0	146 aa		11.2	□□□□□ -0.62
VPS8-222	ENST00000475580	DNAH5	Q8TE73	4624 aa		11.2	□□□□□ -0.62
VPS8-222	ENST00000475580	IGHV3-38	A0A0C4DH36	116 aa		11.19	□□□□□ -0.62
VPS8-222	ENST00000475580		K7EP13	123 aa		11.19	□□□□□ -0.62
VPS8-222	ENST00000475580	EVI2A	P22794	236 aa		11.19	□□□□□ -0.62
VPS8-222	ENST00000475580	TAGLN2	P37802	199 aa	Known RBP	11.19	□□□□□ -0.62
VPS8-222	ENST00000475580	GNG4	P50150	75 aa		11.19	□□□□□ -0.62
VPS8-222	ENST00000475580	LELP1	Q5T871	98 aa		11.19	□□□□□ -0.62
VPS8-222	ENST00000475580	SMIM12	Q96EX1	92 aa		11.19	□□□□□ -0.62
VPS8-222	ENST00000475580	TRAV9-2	A0A087WT02	112 aa		11.18	□□□□□ -0.62
VPS8-222	ENST00000475580	MUC21	A0A0G2JKD1	596 aa		11.18	□□□□□ -0.62
VPS8-222	ENST00000475580	MUC21	A0A140T8X8	626 aa		11.18	□□□□□ -0.62
VPS8-222	ENST00000475580	BLOC1S1	P78537	153 aa		11.18	□□□□□ -0.62
VPS8-222	ENST00000475580	LINC01556	Q5JQF7	62 aa		11.18	□□□□□ -0.62
VPS8-222	ENST00000475580	TRAV8-6	A0A0B4J262	113 aa		11.17	□□□□□ -0.62
VPS8-222	ENST00000475580	IGLC6	P0CF74	106 aa		11.17	□□□□□ -0.62
VPS8-222	ENST00000475580	GZMB	P10144	247 aa		11.17	□□□□□ -0.62
VPS8-222	ENST00000475580	OR10J3	Q5JRS4	329 aa		11.17	□□□□□ -0.62
VPS8-222	ENST00000475580	MSRB1	Q9NZV6	116 aa		11.17	□□□□□ -0.62
VPS8-222	ENST00000475580	SPATA12	Q7Z6I5	190 aa		11.16	□□□□□ -0.62
VPS8-222	ENST00000475580	KRTAP10-2	P60368	255 aa		11.15	□□□□□ -0.62
VPS8-222	ENST00000475580	SPANXN1	Q5VSR9	72 aa		11.15	□□□□□ -0.62
VPS8-222	ENST00000475580	NFE4	Q86UQ8	179 aa		11.15	□□□□□ -0.62
VPS8-222	ENST00000475580	C10orf126	Q8N4M7	172 aa		11.15	□□□□□ -0.62
VPS8-222	ENST00000475580	OR2D3	Q8NGH3	330 aa		11.15	□□□□□ -0.62
VPS8-222	ENST00000475580	DAZAP1	Q96EP5	407 aa	Known RBP	11.15	□□□□□ -0.62
VPS8-222	ENST00000475580	KIF25-AS1	Q9Y6Z4	181 aa		11.15	□□□□□ -0.62
VPS8-222	ENST00000475580	TRBV10-1	A0A0K0K1A3	114 aa		11.14	□□□□□ -0.63
VPS8-222	ENST00000475580	RBFOX3	A6NFN3	312 aa		11.14	□□□□□ -0.63
VPS8-222	ENST00000475580	C16orf90	A8MZG2	172 aa		11.14	□□□□□ -0.63
VPS8-222	ENST00000475580	RPS20	P60866	119 aa	Known RBP	11.14	□□□□□ -0.63
VPS8-222	ENST00000475580	RAB4B	P61018	213 aa		11.14	□□□□□ -0.63
VPS8-222	ENST00000475580		Q8N3U1	123 aa		11.14	□□□□□ -0.63
VPS8-222	ENST00000475580	IBA57-AS1	B1ANH7	110 aa		11.13	□□□□□ -0.63
VPS8-222	ENST00000475580		K7EN84	100 aa		11.13	□□□□□ -0.63
VPS8-222	ENST00000475580		P01737	135 aa		11.13	□□□□□ -0.63
VPS8-222	ENST00000475580	IGHV3-30	P01768	117 aa		11.13	□□□□□ -0.63
VPS8-222	ENST00000475580	IGHV3-33	P01772	117 aa		11.13	□□□□□ -0.63
VPS8-222	ENST00000475580	IGHV3-30-3	P0DP02	117 aa		11.13	□□□□□ -0.63
VPS8-222	ENST00000475580	IGHV3-30-5	P0DP03	117 aa		11.13	□□□□□ -0.63
VPS8-222	ENST00000475580	SST	P61278	116 aa		11.13	□□□□□ -0.63
VPS8-222	ENST00000475580	FER1L6-AS1	Q8NA97	138 aa		11.13	□□□□□ -0.63
VPS8-222	ENST00000475580	OR10G8	Q8NGN5	311 aa		11.13	□□□□□ -0.63
VPS8-222	ENST00000475580	TMEM250	H0YL14	139 aa		11.12	□□□□□ -0.63
VPS8-222	ENST00000475580	UBE2D3	P61077	147 aa		11.12	□□□□□ -0.63
VPS8-222	ENST00000475580	UBE2D2	P62837	147 aa		11.12	□□□□□ -0.63
VPS8-222	ENST00000475580	ZNF56	Q15929	161 aa		11.12	□□□□□ -0.63
VPS8-222	ENST00000475580	NUDT10	Q8NFP7	164 aa		11.12	□□□□□ -0.63
VPS8-222	ENST00000475580	OCC1	Q8TAD7	63 aa		11.12	□□□□□ -0.63
VPS8-222	ENST00000475580	NUDT11	Q96G61	164 aa		11.12	□□□□□ -0.63
VPS8-222	ENST00000475580	BIN3	Q9NQY0	253 aa		11.12	□□□□□ -0.63
VPS8-222	ENST00000475580	TRBV7-3	A0A075B6L6	115 aa		11.11	□□□□□ -0.63
VPS8-222	ENST00000475580	NEXN-AS1	Q8NBZ9	246 aa		11.11	□□□□□ -0.63
VPS8-222	ENST00000475580	TPPP3	Q9BW30	176 aa		11.11	□□□□□ -0.63
VPS8-222	ENST00000475580	APOB	P04114	4563 aa	Known RBP	11.1	□□□□□ -0.63
VPS8-222	ENST00000475580		A0A087WWC5	75 aa		11.1	□□□□□ -0.63
VPS8-222	ENST00000475580	ERVFC1-1	P60608	527 aa		11.1	□□□□□ -0.63
VPS8-222	ENST00000475580	RPL36A	P83881	106 aa	Known RBP	11.1	□□□□□ -0.63
VPS8-222	ENST00000475580	TOR2A	Q5JU69	321 aa		11.1	□□□□□ -0.63
VPS8-222	ENST00000475580	RPL36AL	Q969Q0	106 aa	Known RBP	11.1	□□□□□ -0.63
VPS8-222	ENST00000475580	AP1S3	Q96PC3	154 aa		11.1	□□□□□ -0.63
VPS8-222	ENST00000475580	RNASE7	Q9H1E1	156 aa	Known RBP	11.1	□□□□□ -0.63
VPS8-222	ENST00000475580		A0A087WTM6	91 aa		11.09	□□□□□ -0.63
VPS8-222	ENST00000475580	CACNG7	P62955	275 aa		11.09	□□□□□ -0.63
VPS8-222	ENST00000475580	LYZL1	Q6UWQ5	148 aa		11.09	□□□□□ -0.63
VPS8-222	ENST00000475580	HSPG2	P98160	4391 aa		11.09	□□□□□ -0.63
VPS8-222	ENST00000475580	XKRY2	A2RUG3	117 aa		11.08	□□□□□ -0.64
VPS8-222	ENST00000475580	FUS	P35637	526 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
VPS8-222	ENST00000475580	FAM210A	Q96ND0	272 aa		11.08	□□□□□ -0.64
VPS8-222	ENST00000475580	RPP21	Q9H633	154 aa	Known RBP	11.08	□□□□□ -0.64
VPS8-222	ENST00000475580		F2Z2F3	143 aa		11.07	□□□□□ -0.64
VPS8-222	ENST00000475580		F5H697	171 aa		11.07	□□□□□ -0.64
VPS8-222	ENST00000475580	NDUFS6	O75380	124 aa	Known RBP	11.07	□□□□□ -0.64
VPS8-222	ENST00000475580	CTRL	P40313	264 aa		11.07	□□□□□ -0.64
VPS8-222	ENST00000475580	LAGE3	Q14657	143 aa		11.07	□□□□□ -0.64
VPS8-222	ENST00000475580	DAZ4	Q86SG3	579 aa	Known RBP	11.07	□□□□□ -0.64
VPS8-222	ENST00000475580	NIT1	Q86X76	327 aa		11.07	□□□□□ -0.64
VPS8-222	ENST00000475580		Q9HAA7	133 aa		11.07	□□□□□ -0.64
VPS8-222	ENST00000475580	DAZ3	Q9NR90	486 aa	Known RBP	11.07	□□□□□ -0.64
VPS8-222	ENST00000475580	LRCOL1	A6NCL2	159 aa		11.06	□□□□□ -0.64
VPS8-222	ENST00000475580	SMIM17	P0DL12	118 aa		11.06	□□□□□ -0.64
VPS8-222	ENST00000475580	CNFN	Q9BYD5	112 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms